Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g4199.t1
Gene name
Locationscaffold_025:170880..171990
Strand-
Gene length (bp)1110
Transcript length (bp)1110
Coding sequence length (bp)1110
Protein length (aa) 370

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12770 CHAT CHAT domain 6.3E-35 75 368

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g4199.t1
MKSGAKGGLIVIVIISSLRSDAIIISEEAIDSIELPGLSYSETAEWLEKDLEGRPKNRADRKMRNEQYSDLLHWL
WVSGVKPILDHTEFQPSSSARLPRISWIGCGMASLLPFHAAGDRTPGSNEHTFSYAISSYSLSIKTMFQARAKSR
EGIPGVHPALLMVGMPTTDGHASLPGVGDEIEEIAEVVEPSFTVKRLLHPQPSLVISDLASYDMIHFACHAVSDT
KSPLNGHLLLQGDTSNRSSSKQCSPLTVEAIVKMDLKRARIAYLSACSTAENKGKKLLDEAIHLASGFQVAGFAH
VLGTMWPAADSISRDVAVGFYGNLASLLLKPGVDIDCAVAEAFHFAVNDVRTEWEDQPLYWAQFVHFGG*
Coding >Ani_SJS72_1|g4199.t1
ATGAAGTCGGGCGCAAAGGGAGGCCTGATCGTTATCGTCATCATCAGTTCCCTTCGCAGCGATGCCATCATTATC
TCCGAGGAGGCAATCGACAGTATCGAACTTCCTGGACTATCATACTCGGAGACTGCCGAATGGCTAGAGAAGGAC
CTGGAAGGGAGACCCAAGAATCGCGCTGATCGGAAAATGCGGAACGAACAATACTCCGATCTACTCCATTGGCTC
TGGGTGTCTGGTGTGAAGCCCATCCTCGATCATACCGAATTCCAACCTTCGTCATCAGCAAGACTACCCAGAATC
TCCTGGATAGGCTGCGGTATGGCTAGTCTTTTGCCTTTCCACGCAGCTGGTGACCGCACGCCCGGCTCCAATGAG
CATACCTTCTCGTACGCTATCTCCTCATATTCACTATCAATCAAAACAATGTTCCAGGCCAGAGCCAAGTCTAGA
GAGGGCATCCCTGGTGTGCATCCGGCCTTGTTGATGGTTGGAATGCCCACCACCGACGGGCACGCATCGCTACCT
GGAGTCGGAGACGAGATAGAAGAGATCGCAGAGGTGGTTGAGCCTTCATTTACCGTAAAGAGACTACTACATCCA
CAGCCTTCGCTAGTGATCTCTGATCTTGCTTCCTATGACATGATCCACTTTGCATGTCACGCAGTGTCCGACACC
AAAAGTCCTCTGAACGGTCATCTTTTACTGCAAGGGGACACTTCAAACAGATCTTCAAGCAAACAATGTAGTCCG
CTAACAGTCGAGGCGATCGTCAAAATGGATCTCAAACGTGCGCGCATAGCGTATCTCTCCGCATGTTCGACGGCG
GAAAACAAAGGGAAGAAACTCTTAGACGAGGCTATCCATCTTGCCAGTGGTTTTCAGGTCGCTGGGTTTGCTCAC
GTTCTGGGTACAATGTGGCCGGCGGCTGACTCAATTAGCCGTGATGTTGCCGTTGGCTTCTACGGAAATCTAGCT
TCGCTCCTGTTGAAACCGGGCGTAGATATCGATTGCGCGGTTGCAGAAGCGTTTCATTTCGCGGTCAATGATGTT
CGTACCGAATGGGAGGATCAACCTCTCTATTGGGCACAGTTTGTTCATTTTGGGGGTTAA
Transcript >Ani_SJS72_1|g4199.t1
ATGAAGTCGGGCGCAAAGGGAGGCCTGATCGTTATCGTCATCATCAGTTCCCTTCGCAGCGATGCCATCATTATC
TCCGAGGAGGCAATCGACAGTATCGAACTTCCTGGACTATCATACTCGGAGACTGCCGAATGGCTAGAGAAGGAC
CTGGAAGGGAGACCCAAGAATCGCGCTGATCGGAAAATGCGGAACGAACAATACTCCGATCTACTCCATTGGCTC
TGGGTGTCTGGTGTGAAGCCCATCCTCGATCATACCGAATTCCAACCTTCGTCATCAGCAAGACTACCCAGAATC
TCCTGGATAGGCTGCGGTATGGCTAGTCTTTTGCCTTTCCACGCAGCTGGTGACCGCACGCCCGGCTCCAATGAG
CATACCTTCTCGTACGCTATCTCCTCATATTCACTATCAATCAAAACAATGTTCCAGGCCAGAGCCAAGTCTAGA
GAGGGCATCCCTGGTGTGCATCCGGCCTTGTTGATGGTTGGAATGCCCACCACCGACGGGCACGCATCGCTACCT
GGAGTCGGAGACGAGATAGAAGAGATCGCAGAGGTGGTTGAGCCTTCATTTACCGTAAAGAGACTACTACATCCA
CAGCCTTCGCTAGTGATCTCTGATCTTGCTTCCTATGACATGATCCACTTTGCATGTCACGCAGTGTCCGACACC
AAAAGTCCTCTGAACGGTCATCTTTTACTGCAAGGGGACACTTCAAACAGATCTTCAAGCAAACAATGTAGTCCG
CTAACAGTCGAGGCGATCGTCAAAATGGATCTCAAACGTGCGCGCATAGCGTATCTCTCCGCATGTTCGACGGCG
GAAAACAAAGGGAAGAAACTCTTAGACGAGGCTATCCATCTTGCCAGTGGTTTTCAGGTCGCTGGGTTTGCTCAC
GTTCTGGGTACAATGTGGCCGGCGGCTGACTCAATTAGCCGTGATGTTGCCGTTGGCTTCTACGGAAATCTAGCT
TCGCTCCTGTTGAAACCGGGCGTAGATATCGATTGCGCGGTTGCAGAAGCGTTTCATTTCGCGGTCAATGATGTT
CGTACCGAATGGGAGGATCAACCTCTCTATTGGGCACAGTTTGTTCATTTTGGGGGTTAA
Gene >Ani_SJS72_1|g4199.t1
ATGAAGTCGGGCGCAAAGGGAGGCCTGATCGTTATCGTCATCATCAGTTCCCTTCGCAGCGATGCCATCATTATC
TCCGAGGAGGCAATCGACAGTATCGAACTTCCTGGACTATCATACTCGGAGACTGCCGAATGGCTAGAGAAGGAC
CTGGAAGGGAGACCCAAGAATCGCGCTGATCGGAAAATGCGGAACGAACAATACTCCGATCTACTCCATTGGCTC
TGGGTGTCTGGTGTGAAGCCCATCCTCGATCATACCGAATTCCAACCTTCGTCATCAGCAAGACTACCCAGAATC
TCCTGGATAGGCTGCGGTATGGCTAGTCTTTTGCCTTTCCACGCAGCTGGTGACCGCACGCCCGGCTCCAATGAG
CATACCTTCTCGTACGCTATCTCCTCATATTCACTATCAATCAAAACAATGTTCCAGGCCAGAGCCAAGTCTAGA
GAGGGCATCCCTGGTGTGCATCCGGCCTTGTTGATGGTTGGAATGCCCACCACCGACGGGCACGCATCGCTACCT
GGAGTCGGAGACGAGATAGAAGAGATCGCAGAGGTGGTTGAGCCTTCATTTACCGTAAAGAGACTACTACATCCA
CAGCCTTCGCTAGTGATCTCTGATCTTGCTTCCTATGACATGATCCACTTTGCATGTCACGCAGTGTCCGACACC
AAAAGTCCTCTGAACGGTCATCTTTTACTGCAAGGGGACACTTCAAACAGATCTTCAAGCAAACAATGTAGTCCG
CTAACAGTCGAGGCGATCGTCAAAATGGATCTCAAACGTGCGCGCATAGCGTATCTCTCCGCATGTTCGACGGCG
GAAAACAAAGGGAAGAAACTCTTAGACGAGGCTATCCATCTTGCCAGTGGTTTTCAGGTCGCTGGGTTTGCTCAC
GTTCTGGGTACAATGTGGCCGGCGGCTGACTCAATTAGCCGTGATGTTGCCGTTGGCTTCTACGGAAATCTAGCT
TCGCTCCTGTTGAAACCGGGCGTAGATATCGATTGCGCGGTTGCAGAAGCGTTTCATTTCGCGGTCAATGATGTT
CGTACCGAATGGGAGGATCAACCTCTCTATTGGGCACAGTTTGTTCATTTTGGGGGTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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