Protein ID | Ani_SJS72_1|g4088.t1 |
Gene name | |
Location | scaffold_024:166784..168941 |
Strand | - |
Gene length (bp) | 2157 |
Transcript length (bp) | 2007 |
Coding sequence length (bp) | 2007 |
Protein length (aa) | 669 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06101 | Vps62 | Vacuolar protein sorting-associated protein 62 | 5.1E-11 | 473 | 536 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 60 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g4088.t1 MTNYSWPITTQFCPLLYHHSDLPMSPPLPLLPGSNARLGRFSSSLLLLLLLLLLSQSLCHPSPLGSDASHLLANS PEDSSVTDLADSLVAVAPPTSAVPIGNLVTLPPSTTSTPGDQSGLVVSPSSRSNSSDLEASPGIAQQMIRSTKVA IVTLASLIAYVLINSAARAVNPSAFVWYAEDHDEQSWIASSPSWLDRKACRWLGMCGTAHFRLVRARYGQREPTL GPWSPESEAHYAAWRDAQFNDSQQPAWDEAERSRRQIPEYVFQYAPLVYLSSHEQFWPGDIAEHLYHVTPMLNYT PIQSDEEHPTLQNLDQLNEWQEGEYVYLTSNDNVEDRPPWIEGEKNIPDGPDDDLELSWPDWDGRIDGPIPGDTP EERSQWYDTGRLSSSEGEDDSWSPEDLGYLRPEDLADEDVRTELRKRFGGEPIHVEKTGGRSNAPAILLVMDKGH GVVDAFWFYFYSFNLGNVVLNVRFGNHVGDWEHCLVRFHDGKPKALFFSAHSAGEAYSYEAVEKIGQRPVIYSAM GTHAMYATPGIHAYILPWGLLHDQTDRGPLWDPLLNAHAYTYDYDKDALRASTATPSAPIEWFYFNGHWGDKFYP LGDQRQYRFAGQYHYVNGPVGPRFKHLNRHKVCQQRDEEVCVIKNYIGEEKRAKRWAGTRPEHEKEHD* |
Coding | >Ani_SJS72_1|g4088.t1 ATGACCAATTACTCATGGCCAATCACTACCCAATTCTGTCCCCTTCTGTACCATCATTCTGACCTTCCGATGTCC CCTCCGCTTCCTTTACTTCCGGGCTCAAATGCCCGGCTCGGTCGCTTTTCTTCCTCCCTGCTGCTGCTGCTGTTG CTGCTTCTGCTGTCGCAGTCGCTCTGTCATCCCTCCCCCCTCGGCTCGGATGCCTCTCATCTTCTTGCAAATTCC CCCGAGGATTCCTCCGTGACCGATTTGGCCGACAGCCTGGTCGCTGTAGCTCCTCCTACCTCTGCTGTCCCGATT GGGAATCTGGTCACACTCCCCCCTTCTACCACTTCCACTCCCGGTGATCAGTCCGGGTTAGTGGTGTCTCCCTCG TCGCGCTCCAATTCCTCCGATCTTGAAGCTTCTCCCGGCATCGCGCAGCAGATGATTCGCTCCACCAAGGTTGCC ATTGTCACCCTCGCTTCATTGATCGCCTATGTCTTGATCAATAGCGCCGCGCGGGCCGTGAACCCGTCGGCTTTC GTCTGGTATGCTGAGGATCATGACGAGCAGAGCTGGATTGCCTCCTCGCCGTCCTGGCTGGATCGCAAGGCCTGT CGCTGGCTCGGCATGTGCGGGACCGCCCACTTCCGCCTGGTGCGGGCCCGCTACGGCCAGCGCGAGCCCACTCTG GGACCCTGGTCGCCCGAAAGCGAGGCCCACTACGCCGCCTGGCGCGATGCGCAATTCAATGACTCCCAGCAGCCC GCATGGGATGAAGCCGAGCGCTCGCGTCGGCAAATTCCGGAGTATGTCTTCCAGTATGCACCGTTGGTCTACTTG TCCTCGCATGAACAGTTCTGGCCTGGAGACATTGCCGAACATCTCTACCACGTCACCCCGATGCTGAACTACACC CCCATTCAGTCGGATGAGGAGCATCCCACCCTGCAGAACCTCGATCAGCTGAACGAGTGGCAGGAGGGTGAGTAC GTATATCTGACCAGCAACGACAATGTAGAGGATCGCCCGCCATGGATTGAGGGCGAGAAGAATATTCCTGACGGT CCCGATGACGATCTTGAGCTGTCTTGGCCCGACTGGGATGGCCGGATAGACGGGCCTATTCCCGGGGACACGCCA GAGGAACGCTCCCAGTGGTATGACACTGGCCGTCTCTCATCATCGGAGGGAGAGGATGACAGTTGGTCCCCAGAA GACCTGGGGTATCTCCGCCCGGAGGACCTCGCGGACGAGGATGTCCGAACCGAGTTGCGCAAACGGTTCGGCGGC GAGCCCATCCACGTCGAAAAGACTGGCGGGCGCAGTAATGCTCCGGCAATTCTGTTGGTGATGGACAAAGGCCAC GGCGTCGTAGATGCGTTCTGGTTCTATTTTTACAGCTTCAATCTGGGCAACGTAGTGCTGAACGTGCGGTTCGGG AACCATGTGGGTGACTGGGAGCACTGTCTGGTGCGATTTCACGACGGCAAGCCCAAGGCGCTTTTCTTCAGCGCG CACTCGGCGGGAGAAGCATACAGTTACGAAGCCGTGGAAAAGATCGGCCAGCGGCCCGTGATCTACTCCGCCATG GGCACCCATGCCATGTATGCCACCCCGGGCATCCATGCCTACATCCTGCCCTGGGGCTTGCTGCACGATCAGACC GACCGCGGTCCCCTGTGGGACCCTCTTCTGAACGCCCACGCCTATACGTATGATTATGATAAGGATGCCCTTCGT GCATCCACCGCCACCCCGAGTGCCCCTATCGAGTGGTTCTACTTCAACGGCCATTGGGGCGACAAGTTCTATCCG CTAGGTGACCAGCGACAGTATCGATTCGCAGGTCAGTATCACTATGTCAACGGCCCAGTGGGACCGCGATTCAAG CACCTCAACCGCCACAAGGTCTGTCAGCAGCGGGATGAGGAAGTCTGTGTCATTAAGAACTACATTGGGGAAGAA AAGCGGGCTAAACGCTGGGCGGGTACTCGGCCTGAACATGAGAAAGAACATGACTAG |
Transcript | >Ani_SJS72_1|g4088.t1 ATGACCAATTACTCATGGCCAATCACTACCCAATTCTGTCCCCTTCTGTACCATCATTCTGACCTTCCGATGTCC CCTCCGCTTCCTTTACTTCCGGGCTCAAATGCCCGGCTCGGTCGCTTTTCTTCCTCCCTGCTGCTGCTGCTGTTG CTGCTTCTGCTGTCGCAGTCGCTCTGTCATCCCTCCCCCCTCGGCTCGGATGCCTCTCATCTTCTTGCAAATTCC CCCGAGGATTCCTCCGTGACCGATTTGGCCGACAGCCTGGTCGCTGTAGCTCCTCCTACCTCTGCTGTCCCGATT GGGAATCTGGTCACACTCCCCCCTTCTACCACTTCCACTCCCGGTGATCAGTCCGGGTTAGTGGTGTCTCCCTCG TCGCGCTCCAATTCCTCCGATCTTGAAGCTTCTCCCGGCATCGCGCAGCAGATGATTCGCTCCACCAAGGTTGCC ATTGTCACCCTCGCTTCATTGATCGCCTATGTCTTGATCAATAGCGCCGCGCGGGCCGTGAACCCGTCGGCTTTC GTCTGGTATGCTGAGGATCATGACGAGCAGAGCTGGATTGCCTCCTCGCCGTCCTGGCTGGATCGCAAGGCCTGT CGCTGGCTCGGCATGTGCGGGACCGCCCACTTCCGCCTGGTGCGGGCCCGCTACGGCCAGCGCGAGCCCACTCTG GGACCCTGGTCGCCCGAAAGCGAGGCCCACTACGCCGCCTGGCGCGATGCGCAATTCAATGACTCCCAGCAGCCC GCATGGGATGAAGCCGAGCGCTCGCGTCGGCAAATTCCGGAGTATGTCTTCCAGTATGCACCGTTGGTCTACTTG TCCTCGCATGAACAGTTCTGGCCTGGAGACATTGCCGAACATCTCTACCACGTCACCCCGATGCTGAACTACACC CCCATTCAGTCGGATGAGGAGCATCCCACCCTGCAGAACCTCGATCAGCTGAACGAGTGGCAGGAGGGTGAGTAC GTATATCTGACCAGCAACGACAATGTAGAGGATCGCCCGCCATGGATTGAGGGCGAGAAGAATATTCCTGACGGT CCCGATGACGATCTTGAGCTGTCTTGGCCCGACTGGGATGGCCGGATAGACGGGCCTATTCCCGGGGACACGCCA GAGGAACGCTCCCAGTGGTATGACACTGGCCGTCTCTCATCATCGGAGGGAGAGGATGACAGTTGGTCCCCAGAA GACCTGGGGTATCTCCGCCCGGAGGACCTCGCGGACGAGGATGTCCGAACCGAGTTGCGCAAACGGTTCGGCGGC GAGCCCATCCACGTCGAAAAGACTGGCGGGCGCAGTAATGCTCCGGCAATTCTGTTGGTGATGGACAAAGGCCAC GGCGTCGTAGATGCGTTCTGGTTCTATTTTTACAGCTTCAATCTGGGCAACGTAGTGCTGAACGTGCGGTTCGGG AACCATGTGGGTGACTGGGAGCACTGTCTGGTGCGATTTCACGACGGCAAGCCCAAGGCGCTTTTCTTCAGCGCG CACTCGGCGGGAGAAGCATACAGTTACGAAGCCGTGGAAAAGATCGGCCAGCGGCCCGTGATCTACTCCGCCATG GGCACCCATGCCATGTATGCCACCCCGGGCATCCATGCCTACATCCTGCCCTGGGGCTTGCTGCACGATCAGACC GACCGCGGTCCCCTGTGGGACCCTCTTCTGAACGCCCACGCCTATACGTATGATTATGATAAGGATGCCCTTCGT GCATCCACCGCCACCCCGAGTGCCCCTATCGAGTGGTTCTACTTCAACGGCCATTGGGGCGACAAGTTCTATCCG CTAGGTGACCAGCGACAGTATCGATTCGCAGGTCAGTATCACTATGTCAACGGCCCAGTGGGACCGCGATTCAAG CACCTCAACCGCCACAAGGTCTGTCAGCAGCGGGATGAGGAAGTCTGTGTCATTAAGAACTACATTGGGGAAGAA AAGCGGGCTAAACGCTGGGCGGGTACTCGGCCTGAACATGAGAAAGAACATGACTAG |
Gene | >Ani_SJS72_1|g4088.t1 ATGACCAATTACTCATGGCCAATCACTACCCAATTCTGTCCCCTTCTGTACCATCATTCTGACCTTCCGAGTTCC GTTCCTGCTGTTCTCGACCCTACCGGCTGACTGACAATGTCATCGCGCCTGCCCGCTGTTGCTTCTTATAGTGTC CCCTCCGCTTCCTTTACTTCCGGGCTCAAATGCCCGGCTCGGTCGCTTTTCTTCCTCCCTGCTGCTGCTGCTGTT GCTGCTTCTGCTGTCGCAGTCGCTCTGTCATCCCTCCCCCCTCGGCTCGGATGCCTCTCATCTTCTTGCAAATTC CCCCGAGGATTCCTCCGTGACCGATTTGGCCGACAGCCTGGTCGCTGTAGCTCCTCCTACCTCTGCTGTCCCGAT TGGGAATCTGGTCACACTCCCCCCTTCTACCACTTCCACTCCCGGTGATCAGTCCGGGTTAGTGGTGTCTCCCTC GTCGCGCTCCAATTCCTCCGATCTTGAAGCTTCTCCCGGCATCGCGCAGCAGATGATTCGCTCCACCAAGGTTGC CATTGTCACCCTCGCTTCATTGATCGCCTATGTCTTGATCAATAGCGCCGCGCGGGCCGTGAACCCGTCGGCTTT CGTCTGGTATGCTGAGGATCATGACGAGCAGAGCTGGATTGCCTCCTCGCCGTCCTGGCTGGATCGCAAGGCCTG TCGCTGGCTCGGCATGTGCGGGACCGCCCACTTCCGCCTGGTGCGGGCCCGCTACGGCCAGCGCGAGCCCACTCT GGGACCCTGGTCGCCCGAAAGCGAGGCCCACTACGCCGCCTGGCGCGATGCGCAATTCAATGACTCCCAGCAGCC CGCATGGGATGAAGCCGAGCGCTCGCGTCGGCAAATTCCGGAGTATGTCTTCCAGTATGCACCGTTGGTCTACTT GTCCTCGCATGAACAGTTCTGGCCTGGAGACATTGCCGAACATCTCTACCACGTCACCCCGATGCTGAACTACAC CCCCATTCAGTCGGATGAGGAGCATCCCACCCTGCAGAACCTCGATCAGCTGAACGAGTGGCAGGAGGGTGAGTA CGTATATCTGACCAGCAACGACAATGTAGAGGATCGCCCGCCATGGATTGAGGGCGAGAAGAATATTCCTGACGG TCCCGATGACGATCTTGAGCTGTCTTGGCCCGACTGGGATGGCCGGATAGACGGGCCTATTCCCGGGGACACGCC AGAGGAACGCTCCCAGTGGTATGACACTGGCCGTCTCTCATCATCGGAGGGAGAGGATGACAGTTGGTCCCCAGA AGACCTGGGGTATCTCCGCCCGGAGGACCTCGCGGACGAGGATGTCCGAACCGAGTTGCGCAAACGGTTCGGCGG CGAGCCCATCCACGTCGAAAAGACTGGCGGGCGCAGTAATGCTCCGGCAATTCTGTTGGTGATGGACAAAGGCCA CGGCGTCGTAGATGCGTTCTGGTTCTATTTTTACAGCTTCAATCTGGGCAACGTAGTGCTGAACGTGCGGTTCGG GAACCATGTGGGTGACTGGGAGCACTGTCTGGTGCGATTTCACGACGGCAAGCCCAAGGCGCTTTTCTTCAGCGC GCACTCGGCGGGAGAAGCATACAGTTACGAAGCCGTGGAAAAGATCGGCCAGCGGGTAAGTCGAGATATAAATTG CTCCCCTCCCGCCCGTCCAGGGGATTCCCGACGCTAACCATGGATCCCTGGCAGCCCGTGATCTACTCCGCCATG GGCACCCATGCCATGTATGCCACCCCGGGCATCCATGCCTACATCCTGCCCTGGGGCTTGCTGCACGATCAGACC GACCGCGGTCCCCTGTGGGACCCTCTTCTGAACGCCCACGCCTATACGTATGATTATGATAAGGATGCCCTTCGT GCATCCACCGCCACCCCGAGTGCCCCTATCGAGTGGTTCTACTTCAACGGCCATTGGGGCGACAAGTTCTATCCG CTAGGTGACCAGCGACAGTATCGATTCGCAGGTCAGTATCACTATGTCAACGGCCCAGTGGGACCGCGATTCAAG CACCTCAACCGCCACAAGGTCTGTCAGCAGCGGGATGAGGAAGTCTGTGTCATTAAGAACTACATTGGGGAAGAA AAGCGGGCTAAACGCTGGGCGGGTACTCGGCCTGAACATGAGAAAGAACATGACTAG |