Protein ID | Ani_SJS72_1|g4045.t1 |
Gene name | |
Location | scaffold_024:45892..47704 |
Strand | + |
Gene length (bp) | 1812 |
Transcript length (bp) | 1548 |
Coding sequence length (bp) | 1548 |
Protein length (aa) | 516 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00085 | Thioredoxin | Thioredoxin | 2.4E-29 | 27 | 126 |
PF00085 | Thioredoxin | Thioredoxin | 5.3E-24 | 362 | 467 |
PF13848 | Thioredoxin_6 | Thioredoxin-like domain | 3.6E-07 | 60 | 164 |
PF13848 | Thioredoxin_6 | Thioredoxin-like domain | 3.9E-37 | 159 | 338 |
PF01216 | Calsequestrin | Calsequestrin | 5.2E-12 | 65 | 344 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005509 | calcium ion binding | Yes |
GO:0003674 | molecular_function | No |
GO:0043169 | cation binding | No |
GO:0043167 | ion binding | No |
GO:0005488 | binding | No |
GO:0046872 | metal ion binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 21 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g4045.t1 MRSFAPWLVSLLGASAVVAAADTESDVISLDQDTFESFMNEHGLVLAEFFAPWCGHCKALAPKYEEAATELKAKN IPLVKVDCTAEEDLCRSQGVEGYPTLKIFRGVDSSKPYQGARQTESIVSYMIKQSLPAVSSVNEENLEEIKTMDK IVVIGYIPSDDQETYQAFEKYAESQRDNYLFAATDDAAIAKSEGVEQPSIVLYKDFDEKKAVYDGEIEQEAIHSW VKSASTPLVGEIGPETYSGYIGAGVPLAYIFAETKEEREKYTEDFKPIAQKHKGAINIATIDAKMFGAHAGNLNL DSQKFPAFAIQDPAKNAKYPYDQAKELNADEVEKFIQDVLDGKVEPSIKSEPVPESQEGPVTVVVAHSYKDLVID NDKDVLLEFYAPWCGHCKALAPKYDELAALYADHPDLAAKVTIAKIDATANDVPDPITGFPTLRLYPAGAKDSPI EYSGSRTVEDLANFVKENGKHNVDALNVASEETQEGGDVTEAAPSATEAETPAATDDEKAEHDEL* |
Coding | >Ani_SJS72_1|g4045.t1 ATGCGCTCCTTCGCGCCTTGGCTCGTTAGCCTTCTCGGAGCATCCGCGGTGGTTGCGGCTGCTGATACCGAGTCT GATGTTATTTCACTGGATCAGGACACATTTGAGAGCTTCATGAACGAGCACGGTCTCGTGCTTGCCGAATTCTTT GCTCCTTGGTGTGGCCACTGTAAAGCCCTCGCACCAAAGTATGAGGAAGCAGCTACGGAGCTCAAGGCGAAGAAT ATCCCTCTGGTGAAGGTTGACTGCACCGCCGAGGAGGATCTCTGCCGGAGTCAGGGCGTTGAAGGCTACCCTACC CTCAAGATCTTTCGGGGTGTTGACTCTAGCAAGCCTTACCAGGGCGCTAGGCAAACAGAATCAATCGTTTCCTAC ATGATTAAGCAGTCACTTCCTGCAGTATCCTCCGTGAACGAGGAGAATTTAGAAGAGATCAAGACCATGGACAAG ATTGTCGTGATCGGTTATATCCCGTCCGACGACCAGGAAACTTATCAAGCATTCGAAAAATATGCTGAGTCTCAG CGGGATAACTACCTCTTTGCTGCCACGGACGATGCCGCCATTGCGAAATCGGAAGGTGTCGAGCAGCCCTCCATC GTGCTCTATAAGGACTTCGATGAGAAGAAGGCTGTTTACGATGGCGAGATCGAACAGGAGGCTATTCACAGCTGG GTGAAATCCGCTAGTACTCCCCTTGTGGGCGAGATTGGCCCTGAGACCTACTCTGGCTATATTGGGGCTGGAGTC CCATTGGCCTATATCTTTGCCGAGACCAAGGAGGAGCGCGAAAAGTACACCGAAGACTTCAAGCCTATTGCCCAG AAGCACAAGGGTGCTATCAACATTGCTACTATTGACGCCAAGATGTTCGGTGCCCACGCTGGAAACCTCAACCTA GACTCTCAGAAGTTCCCGGCATTCGCCATCCAGGATCCCGCAAAGAACGCCAAATACCCCTATGACCAGGCCAAG GAATTGAATGCCGACGAGGTTGAAAAGTTCATCCAGGATGTTCTGGATGGGAAGGTCGAGCCTAGCATCAAGTCG GAACCTGTTCCCGAATCTCAGGAGGGCCCCGTCACGGTTGTAGTGGCCCATTCCTACAAGGATCTCGTCATTGAC AATGACAAGGATGTCTTGCTCGAATTCTACGCACCTTGGTGTGGACACTGCAAAGCTCTTGCTCCGAAGTACGAT GAGCTCGCAGCTCTCTATGCTGACCACCCCGATTTGGCGGCTAAGGTCACCATCGCTAAGATCGATGCGACGGCC AACGATGTTCCGGACCCGATTACCGGATTCCCTACCCTCAGACTCTACCCGGCCGGTGCCAAGGACTCCCCCATT GAGTACTCTGGCTCGCGCACTGTCGAGGATCTTGCCAACTTTGTGAAGGAGAATGGCAAACACAACGTTGACGCC CTCAATGTCGCTTCCGAGGAAACACAGGAGGGTGGTGATGTGACTGAGGCTGCTCCCTCCGCTACGGAGGCCGAG ACCCCGGCTGCCACAGATGACGAGAAGGCAGAACATGACGAACTGTAA |
Transcript | >Ani_SJS72_1|g4045.t1 ATGCGCTCCTTCGCGCCTTGGCTCGTTAGCCTTCTCGGAGCATCCGCGGTGGTTGCGGCTGCTGATACCGAGTCT GATGTTATTTCACTGGATCAGGACACATTTGAGAGCTTCATGAACGAGCACGGTCTCGTGCTTGCCGAATTCTTT GCTCCTTGGTGTGGCCACTGTAAAGCCCTCGCACCAAAGTATGAGGAAGCAGCTACGGAGCTCAAGGCGAAGAAT ATCCCTCTGGTGAAGGTTGACTGCACCGCCGAGGAGGATCTCTGCCGGAGTCAGGGCGTTGAAGGCTACCCTACC CTCAAGATCTTTCGGGGTGTTGACTCTAGCAAGCCTTACCAGGGCGCTAGGCAAACAGAATCAATCGTTTCCTAC ATGATTAAGCAGTCACTTCCTGCAGTATCCTCCGTGAACGAGGAGAATTTAGAAGAGATCAAGACCATGGACAAG ATTGTCGTGATCGGTTATATCCCGTCCGACGACCAGGAAACTTATCAAGCATTCGAAAAATATGCTGAGTCTCAG CGGGATAACTACCTCTTTGCTGCCACGGACGATGCCGCCATTGCGAAATCGGAAGGTGTCGAGCAGCCCTCCATC GTGCTCTATAAGGACTTCGATGAGAAGAAGGCTGTTTACGATGGCGAGATCGAACAGGAGGCTATTCACAGCTGG GTGAAATCCGCTAGTACTCCCCTTGTGGGCGAGATTGGCCCTGAGACCTACTCTGGCTATATTGGGGCTGGAGTC CCATTGGCCTATATCTTTGCCGAGACCAAGGAGGAGCGCGAAAAGTACACCGAAGACTTCAAGCCTATTGCCCAG AAGCACAAGGGTGCTATCAACATTGCTACTATTGACGCCAAGATGTTCGGTGCCCACGCTGGAAACCTCAACCTA GACTCTCAGAAGTTCCCGGCATTCGCCATCCAGGATCCCGCAAAGAACGCCAAATACCCCTATGACCAGGCCAAG GAATTGAATGCCGACGAGGTTGAAAAGTTCATCCAGGATGTTCTGGATGGGAAGGTCGAGCCTAGCATCAAGTCG GAACCTGTTCCCGAATCTCAGGAGGGCCCCGTCACGGTTGTAGTGGCCCATTCCTACAAGGATCTCGTCATTGAC AATGACAAGGATGTCTTGCTCGAATTCTACGCACCTTGGTGTGGACACTGCAAAGCTCTTGCTCCGAAGTACGAT GAGCTCGCAGCTCTCTATGCTGACCACCCCGATTTGGCGGCTAAGGTCACCATCGCTAAGATCGATGCGACGGCC AACGATGTTCCGGACCCGATTACCGGATTCCCTACCCTCAGACTCTACCCGGCCGGTGCCAAGGACTCCCCCATT GAGTACTCTGGCTCGCGCACTGTCGAGGATCTTGCCAACTTTGTGAAGGAGAATGGCAAACACAACGTTGACGCC CTCAATGTCGCTTCCGAGGAAACACAGGAGGGTGGTGATGTGACTGAGGCTGCTCCCTCCGCTACGGAGGCCGAG ACCCCGGCTGCCACAGATGACGAGAAGGCAGAACATGACGAACTGTAA |
Gene | >Ani_SJS72_1|g4045.t1 ATGCGCTCCTTCGCGCCTTGGCTCGTTAGCCTTCTCGGAGCATCCGCGGTGGTTGCGGCTGCTGATACCGAGTCT GATGTTATTTCACTGGATCAGGACACATTTGAGAGCTTCATGAACGAGCACGGTCTCGTGCTTGCCGAATTCTTT GCTCCTTGGTGTGGCCACTGTAAAGCCCTCGCACCAAAGTATGAGGAAGCAGCTACGGAGCTCAAGGCGAAGAAT ATCCCTCTGGTGAAGGTTGACTGCACCGCCGAGGAGGATCTCTGCCGGAGTCAGGGCGTTGAAGGCTACCCTACC CTCAAGATCTTTCGGGGTGTTGACTCTAGCAAGCCTTACCAGGGCGCTAGGCAAACAGAATCGTGAGTCCTCTTG GTTTTGACTGGACGAAAGAAATGGATATGCATCAAAAGGCTATCGTGTATGTGATGTGCTACTGACCCATCGGAC GGTTTCCCAGAATCGTTTCCTACATGATTAAGCAGTCACTTCCTGCAGTATCCTCCGTGAACGAGGAGAATTTAG AAGAGATCAAGACCATGGACAAGATTGTCGTGATCGGTTATATCCCGTCCGACGACCAGGAAACTTATCAAGCAT TCGAAAAATATGCTGAGTCTCAGCGGGATAACTACCTCTTTGCTGCCACGGACGATGCCGCCATTGCGAAATCGG AAGGTGTCGAGCAGCCCTCCATCGTGCTCTATAAGGACTTCGATGAGAAGAAGGCTGTTTACGATGGCGAGATCG AACAGGAGGCTATTCACAGCTGGGTGAAATCCGCTAGTACTCCCCTTGTGGGCGAGATTGGCCCTGAGACCTACT CTGGCTATATTGGGGTAAGTTGAATCTATACGTCGACGTGACATCTCTTTGCATTTCGGCTTGAGTTTCGATACC AATTTGCTGGCTGAACTGGCTAACCACTTTTCTTATAGGCTGGAGTCCCATTGGCCTATATCTTTGCCGAGACCA AGGAGGAGCGCGAAAAGTACACCGAAGACTTCAAGCCTATTGCCCAGAAGCACAAGGGTGCTATCAACATTGCTA CTATTGACGCCAAGATGTTCGGTGCCCACGCTGGAAACCTCAACCTAGACTCTCAGAAGTTCCCGGCATTCGCCA TCCAGGATCCCGCAAAGAACGCCAAATACCCCTATGACCAGGCCAAGGAATTGAATGCCGACGAGGTTGAAAAGT TCATCCAGGATGTTCTGGATGGGAAGGTCGAGCCTAGCATCAAGTCGGAACCTGTTCCCGAATCTCAGGAGGGCC CCGTCACGGTTGTAGTGGCCCATTCCTACAAGGATCTCGTCATTGACAATGACAAGGATGTCTTGCTCGAATTCT ACGCACCTTGGTGTGGACACTGCAAAGCGTATGTCTCTTCGATCCCCTAAGTACACTAGGTGTTGGAGCACAATC AACTAACAGCAAATCTATAGTCTTGCTCCGAAGTACGATGAGCTCGCAGCTCTCTATGCTGACCACCCCGATTTG GCGGCTAAGGTCACCATCGCTAAGATCGATGCGACGGCCAACGATGTTCCGGACCCGATTACCGGATTCCCTACC CTCAGACTCTACCCGGCCGGTGCCAAGGACTCCCCCATTGAGTACTCTGGCTCGCGCACTGTCGAGGATCTTGCC AACTTTGTGAAGGAGAATGGCAAACACAACGTTGACGCCCTCAATGTCGCTTCCGAGGAAACACAGGAGGGTGGT GATGTGACTGAGGCTGCTCCCTCCGCTACGGAGGCCGAGACCCCGGCTGCCACAGATGACGAGAAGGCAGAACAT GACGAACTGTAA |