Protein ID | Ani_SJS72_1|g4044.t1 |
Gene name | |
Location | scaffold_024:42857..44761 |
Strand | + |
Gene length (bp) | 1904 |
Transcript length (bp) | 1047 |
Coding sequence length (bp) | 1047 |
Protein length (aa) | 349 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11700 | ATG22 | Vacuole effluxer Atg22 like | 1.4E-55 | 30 | 187 |
PF11700 | ATG22 | Vacuole effluxer Atg22 like | 1.0E-62 | 185 | 315 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 36 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 39 | 61 | 22 |
2 | 124 | 146 | 22 |
3 | 161 | 180 | 19 |
4 | 185 | 207 | 22 |
5 | 222 | 244 | 22 |
6 | 256 | 278 | 22 |
7 | 288 | 306 | 18 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g4044.t1 MQNCTNSPEDQAASVCPPPPQFPGDDTRPTSKKELAGWYSYGWAAEVFTVCAMGSFLPITLEQMARERGVLLSDK KTPCSATWSSLESTSPSGTWNTIFDATAFTKPGSPRTSQCIIYILGVEINTASFAMYTFSLSVFIQAILIISMSG AADHGSYRKMLLVIFALIGSVSTMLFLAVVPRLYLLVACIILFELVPLYGLLGFIPAIKSLGYLGLQQPWEMYPL GVIYGLVMGGLSSYCRSFFGELIPPGYEAAFYALYAITDKGSSVFGPAIVGIITDRYGEIRPAFVFLAVLILLPL PLMLLVDVERGKRDALSLSKELKGRPRQEVPVYGAVTHCPSHSENLAE* |
Coding | >Ani_SJS72_1|g4044.t1 ATGCAGAATTGCACCAATTCACCGGAAGACCAGGCCGCTTCCGTCTGTCCTCCACCTCCACAATTCCCTGGAGAT GACACCAGGCCGACATCTAAGAAGGAGCTCGCTGGATGGTACAGCTATGGTTGGGCTGCCGAGGTTTTTACAGTG TGCGCTATGGGATCGTTCCTCCCCATTACCCTAGAGCAAATGGCTCGCGAACGCGGCGTACTTCTTTCGGATAAG AAAACACCGTGCAGTGCTACTTGGAGCTCTCTAGAATCGACCTCACCATCAGGGACCTGGAACACCATCTTTGAT GCCACTGCGTTTACGAAACCAGGCTCACCCAGAACAAGCCAGTGCATTATTTATATTCTCGGCGTTGAAATAAAC ACTGCAAGCTTCGCTATGTACACATTCTCATTGAGTGTATTCATACAAGCCATTCTGATAATATCAATGTCAGGT GCTGCGGATCACGGAAGCTACCGCAAAATGCTGTTGGTTATCTTTGCACTTATCGGCTCCGTTTCTACGATGTTG TTTCTTGCCGTCGTTCCAAGGCTCTATCTTCTCGTTGCTTGTATTATTCTATTCGAGCTTGTGCCGCTCTATGGT CTCTTAGGCTTCATTCCCGCAATCAAAAGCCTAGGGTACTTAGGCCTCCAACAACCATGGGAGATGTACCCATTG GGCGTCATATATGGACTTGTTATGGGTGGACTTTCTTCATACTGTCGGAGCTTCTTTGGAGAATTGATCCCTCCG GGATATGAGGCTGCATTCTATGCTTTATATGCCATTACTGATAAAGGCTCCAGTGTTTTCGGTCCCGCCATTGTT GGAATCATCACAGATCGTTACGGGGAAATCCGACCCGCCTTCGTCTTTCTTGCTGTCCTGATTCTGCTCCCTTTA CCATTAATGCTCTTGGTCGATGTAGAGCGTGGAAAGAGGGACGCGCTTTCACTTTCGAAAGAACTTAAGGGTAGA CCGAGACAGGAGGTACCGGTCTATGGAGCTGTCACTCATTGCCCGTCTCATAGCGAGAACCTAGCGGAGTAG |
Transcript | >Ani_SJS72_1|g4044.t1 ATGCAGAATTGCACCAATTCACCGGAAGACCAGGCCGCTTCCGTCTGTCCTCCACCTCCACAATTCCCTGGAGAT GACACCAGGCCGACATCTAAGAAGGAGCTCGCTGGATGGTACAGCTATGGTTGGGCTGCCGAGGTTTTTACAGTG TGCGCTATGGGATCGTTCCTCCCCATTACCCTAGAGCAAATGGCTCGCGAACGCGGCGTACTTCTTTCGGATAAG AAAACACCGTGCAGTGCTACTTGGAGCTCTCTAGAATCGACCTCACCATCAGGGACCTGGAACACCATCTTTGAT GCCACTGCGTTTACGAAACCAGGCTCACCCAGAACAAGCCAGTGCATTATTTATATTCTCGGCGTTGAAATAAAC ACTGCAAGCTTCGCTATGTACACATTCTCATTGAGTGTATTCATACAAGCCATTCTGATAATATCAATGTCAGGT GCTGCGGATCACGGAAGCTACCGCAAAATGCTGTTGGTTATCTTTGCACTTATCGGCTCCGTTTCTACGATGTTG TTTCTTGCCGTCGTTCCAAGGCTCTATCTTCTCGTTGCTTGTATTATTCTATTCGAGCTTGTGCCGCTCTATGGT CTCTTAGGCTTCATTCCCGCAATCAAAAGCCTAGGGTACTTAGGCCTCCAACAACCATGGGAGATGTACCCATTG GGCGTCATATATGGACTTGTTATGGGTGGACTTTCTTCATACTGTCGGAGCTTCTTTGGAGAATTGATCCCTCCG GGATATGAGGCTGCATTCTATGCTTTATATGCCATTACTGATAAAGGCTCCAGTGTTTTCGGTCCCGCCATTGTT GGAATCATCACAGATCGTTACGGGGAAATCCGACCCGCCTTCGTCTTTCTTGCTGTCCTGATTCTGCTCCCTTTA CCATTAATGCTCTTGGTCGATGTAGAGCGTGGAAAGAGGGACGCGCTTTCACTTTCGAAAGAACTTAAGGGTAGA CCGAGACAGGAGGTACCGGTCTATGGAGCTGTCACTCATTGCCCGTCTCATAGCGAGAACCTAGCGGAGTAG |
Gene | >Ani_SJS72_1|g4044.t1 ATGCAGAATTGCACCAATTCACCGGAAGACCAGGCCGCTTCCGTCTGTCCTCCACCTCCACAATTCCCTGGAGAT GACACCAGGCCGACATCTAAGAAGGAGCTCGCTGGATGGTACAGCTATGGTTGGGCTGCCGAGGTTTTTACAGTG TGCGCTATGGGTATGCATATCTTACACAGGCCGAGAAGTACGATTCTTACACCTCCTAACCTAATTTAGGATCGT TCCTCCCCATTACCCTAGAGCAAATGGCTCGCGAACGCGGCGTACTTCTTTCGGATAAGAAAACACCGTGCAGTG CTACTTGGAGCTCTCTAGAATCGACCTCACCATCAGGGACCTGGAACACCATCTTTGATGCCACTGCGTTTACGA AACCAGGCTCACCCAGAACAAGCCAGTGCATTATTTATATTCTCGGCGTTGAAATAAACACTGCAAGCTTCGCTA TGTACACATTCTCATTGAGTGTATTCATACAAGCCATTCTGATAATATCAATGTCAGGTGCTGCGGATCACGGAA GCTACCGCAAAATGCTGTTGGTTATCTTTGCACTTATCGGCTCCGTTTCTACGATGTTGTTTCTTGCCGTCGTTC CAAGGCTCTATCTTCTCGGTGGGCTGTTCGCAATTATATCTAATACATGTTTCGGAGCTTCTTTTGTACTGTTGA ATTCTTTCCTACCCCTGCTGGTTCGCTATCATCCTATATTGATGGGTGGACATGGTGACGGGGATATACCCACCG GAACCAGCCATGATTCGACCTCTACAGCCGATGGCCCGGGCCAAACTGACGGAACTGAAACAACATCACTGCTTC GGCCAGAACAAAACCGCAATGCGTACTCTCTGGGTGACGAAACTCAAGTGTTTGCTTCGAAGACTTCTCAGGAAT TGAAGCTCTCCACAAAATTATCCTCAAACGGAATCGGCATCGGATACATAGGTGCAGTTATACTGCAAGCAATTT GCATCCTAGTTGTTGTCGAAACTCACCAGACAACATTCTCGTTGCGCCTAGTCCTCTTTTTAATTGGGCTCTGGT GGTTCACCTTCACCATACCTGCGGCAATGTGGCTACGTGCCCGGCCCGGCCCGCCCCTTCCATATGGGAAAGAGA GTGGGACATGGACTAGTTATATGGCATACGCTTGGAAGTCCTTGGGCAGGACAGTAATGCGCACTCGACATCTGA GAGATATCCTTTTATTCCTGGCAGCTTGGTTCCTCTTAAGTGATGGTATCGCGACAGTCAGCGGGACCGCCGTCC TGTTTGCAAAGACACAATTGGGGATGCAGCCAGCCGCTTTGGGGCTGATTAATGTCATTGCGATGATTGCAGGAG TTTTTGGAGCATTCTCTTGGAGCTTTGTGTCGCGGACATTCAATCTCCGGGCTTCACAAACGATAGTTGCTTGTA TTATTCTATTCGAGCTTGTGCCGCTCTATGGTCTCTTAGGCTTCATTCCCGCAATCAAAAGCCTAGGGTACTTAG GCCTCCAACAACCATGGGAGATGTACCCATTGGGCGTCATATATGGACTTGTTATGGGTGGACTTTCTTCATACT GTCGGAGCTTCTTTGGAGAATTGATCCCTCCGGGATATGAGGCTGCATTCTATGCTTTATATGCCATTACTGATA AAGGCTCCAGTGTTTTCGGTCCCGCCATTGTTGGAATCATCACAGATCGTTACGGGGAAATCCGACCCGCCTTCG TCTTTCTTGCTGTCCTGATTCTGCTCCCTTTACCATTAATGCTCTTGGTCGATGTAGAGCGTGGAAAGAGGGACG CGCTTTCACTTTCGAAAGAACTTAAGGGTAGACCGAGACAGGAGGTACCGGTCTATGGAGCTGTCACTCATTGCC CGTCTCATAGCGAGAACCTAGCGGAGTAG |