© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g4032.t1 |
| Gene name | |
| Location | scaffold_024:11441..15629 |
| Strand | - |
| Gene length (bp) | 4188 |
| Transcript length (bp) | 2220 |
| Coding sequence length (bp) | 2220 |
| Protein length (aa) | 740 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04506 | Rft-1 | Rft protein | 3.8E-101 | 297 | 713 |
| PF04756 | OST3_OST6 | OST3 / OST6 family, transporter family | 2.9E-92 | 34 | 301 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006488 | dolichol-linked oligosaccharide biosynthetic process | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:1901135 | carbohydrate derivative metabolic process | No |
| GO:0006629 | lipid metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0009987 | cellular process | No |
| GO:0006490 | oligosaccharide-lipid intermediate biosynthetic process | No |
| GO:1901137 | carbohydrate derivative biosynthetic process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0044255 | cellular lipid metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 20 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 180 | 202 | 22 |
| 2 | 209 | 231 | 22 |
| 3 | 257 | 279 | 22 |
| 4 | 384 | 406 | 22 |
| 5 | 433 | 455 | 22 |
| 6 | 528 | 550 | 22 |
| 7 | 565 | 587 | 22 |
| 8 | 600 | 618 | 18 |
| 9 | 628 | 647 | 19 |
| 10 | 668 | 687 | 19 |
| 11 | 697 | 719 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g4032.t1 MKLFNLLLSFLCMISSASCGLADTDKFERYRSLSRSAPIELNDSSYEEITSKPRDYHVAVLLTAADARYGCILCR EFQPEWELIARSWNKGPKPDGLQMLFGTLDFSDGKGTFQKLMLQTAPVLLVFPPTVGPFAKIDDAPLRFDFSGPI SAEQLYTWMNRQLPEGPKPPLVRPINYMRLVSGITILMGAVTLFTVLSPYVLPIVRNRNLWAAFSLIAILLFTSG HMFNHIRKVPYVAGDGRGGISYFAGGFSNQFGMETQIVAAIYAVLSFATIALAMKVPRIADNKAQQVAVIIWGSV LLEDFLCKLASREVSELPYYHASVIITSVASLMELSTEPFFTVVQQYMLHRQRAVVEMSAAFVKSLTTCLACAWA SRTGHSIGVLPFSIGYLCYSSTLICGYILALPRVADEQKFSMFPTKIKSRSDYFMGRFSWPMIGLSTNVFFQSVV KHLLTQGDSMMLATMTSLEDQGIYALASNYGGLLARVLFQPIEESSRTLFSSLLNSGGSGNLRVENINAAKTQLT EVLRAYSLMAVVGFPLGPVLAPQLLHLLGGRIWASPRISSLLSLYCYYIPFLAYNGISEAFVSSAANSAELRRQA VWMGVFSACFASAAYLFLKVGALGAHGMVYANIVNMAVRIVWSFSFIQTFMSRHGSGIAISELSPRPLTCIASIT MSIVLNSRVLYALDIYRTRDALILGAMYILLVSYLERKYLLIYYTKAHELVKFKTSSTPKSKSE* |
| Coding | >Ani_SJS72_1|g4032.t1 ATGAAGCTCTTCAACCTTCTCTTGTCTTTTCTCTGCATGATCAGTTCCGCTTCTTGCGGCCTCGCAGACACAGAC AAGTTTGAGAGATATCGTTCACTCTCTCGCTCCGCCCCAATCGAACTGAACGACTCATCGTACGAAGAGATAACA TCTAAGCCTCGCGACTATCATGTCGCAGTGCTTTTGACAGCCGCAGACGCTCGCTATGGGTGTATTCTTTGTCGC GAATTTCAACCTGAGTGGGAGCTCATAGCACGAAGCTGGAACAAAGGTCCCAAGCCCGACGGACTTCAAATGCTC TTTGGGACCCTTGACTTTTCCGATGGAAAGGGGACCTTTCAGAAGTTGATGCTCCAAACTGCGCCTGTTCTCCTG GTCTTTCCTCCTACCGTTGGCCCCTTCGCCAAGATTGACGACGCACCTCTGCGATTTGACTTTAGCGGCCCTATC TCTGCTGAACAGCTATATACATGGATGAACCGTCAGCTTCCAGAGGGCCCGAAGCCGCCACTTGTTCGTCCGATC AACTACATGCGACTTGTCTCCGGCATAACCATTTTGATGGGTGCTGTGACCCTTTTTACAGTTTTGTCACCTTAT GTCCTTCCCATTGTTCGTAACCGGAACTTGTGGGCTGCTTTCAGTCTGATTGCCATCCTCCTATTCACAAGTGGC CACATGTTCAACCATATTCGCAAAGTCCCATATGTTGCCGGAGATGGTAGAGGTGGTATTAGCTACTTCGCTGGT GGATTTTCAAACCAGTTCGGCATGGAGACGCAGATTGTTGCTGCCATCTATGCCGTCCTATCTTTTGCGACAATT GCCCTTGCAATGAAGGTGCCCCGTATCGCAGACAACAAGGCACAACAGGTAGCTGTGATCATCTGGGGTTCCGTA CTCCTTGAGGATTTCCTATGTAAGCTGGCTTCGAGAGAGGTGTCAGAGTTACCCTATTACCACGCAAGCGTGATC ATCACTTCCGTTGCATCCCTTATGGAGCTCTCCACTGAGCCCTTCTTCACTGTAGTGCAGCAATATATGCTACAC AGACAACGTGCAGTTGTTGAGATGAGTGCAGCCTTTGTAAAAAGCCTTACGACCTGCCTTGCTTGTGCATGGGCT TCCAGGACCGGCCACAGCATTGGCGTGCTCCCATTTTCAATTGGTTATCTCTGTTATTCTTCCACACTCATCTGC GGCTATATACTAGCCCTACCGAGGGTTGCAGACGAGCAGAAGTTTTCTATGTTTCCCACAAAGATAAAGTCAAGA TCAGATTATTTCATGGGGAGATTCTCATGGCCGATGATAGGACTGTCCACAAATGTGTTCTTTCAGTCGGTGGTG AAACATCTTCTCACCCAGGGTGATTCTATGATGCTGGCAACAATGACGAGCTTAGAAGATCAAGGCATATATGCA CTAGCCTCTAATTACGGTGGTCTCCTGGCTCGCGTCTTGTTTCAGCCCATTGAAGAAAGCAGTCGAACGCTTTTT TCCTCACTGCTAAACTCTGGCGGGAGCGGGAATCTACGTGTAGAAAACATCAATGCTGCTAAAACTCAGTTGACA GAAGTTCTTCGTGCATATAGTCTGATGGCTGTTGTGGGATTTCCCCTCGGTCCAGTTCTGGCACCTCAATTGCTA CATCTGTTAGGCGGGCGCATCTGGGCTTCACCCAGGATCAGCAGCCTGCTTTCACTTTATTGCTATTATATACCA TTTCTGGCTTATAATGGTATAAGTGAAGCATTTGTCTCATCAGCAGCAAACTCAGCAGAATTACGCAGACAAGCG GTATGGATGGGTGTGTTTTCAGCATGCTTTGCATCCGCGGCGTACTTGTTCTTAAAAGTTGGCGCTCTCGGTGCC CACGGAATGGTTTATGCCAATATTGTTAACATGGCAGTTCGTATCGTCTGGAGCTTTTCCTTTATTCAGACATTC ATGTCTCGACACGGAAGCGGTATCGCTATTTCTGAACTTAGCCCACGGCCGCTTACCTGTATCGCCAGTATCACG ATGTCTATAGTTCTTAACTCAAGAGTTCTATATGCTCTTGATATCTACAGGACGAGAGATGCGCTGATACTTGGA GCTATGTATATTCTTCTCGTGTCTTATCTCGAGCGGAAATATTTGTTGATCTATTACACAAAAGCCCACGAGCTG GTGAAATTTAAAACATCCAGTACTCCAAAGTCCAAAAGCGAATAA |
| Transcript | >Ani_SJS72_1|g4032.t1 ATGAAGCTCTTCAACCTTCTCTTGTCTTTTCTCTGCATGATCAGTTCCGCTTCTTGCGGCCTCGCAGACACAGAC AAGTTTGAGAGATATCGTTCACTCTCTCGCTCCGCCCCAATCGAACTGAACGACTCATCGTACGAAGAGATAACA TCTAAGCCTCGCGACTATCATGTCGCAGTGCTTTTGACAGCCGCAGACGCTCGCTATGGGTGTATTCTTTGTCGC GAATTTCAACCTGAGTGGGAGCTCATAGCACGAAGCTGGAACAAAGGTCCCAAGCCCGACGGACTTCAAATGCTC TTTGGGACCCTTGACTTTTCCGATGGAAAGGGGACCTTTCAGAAGTTGATGCTCCAAACTGCGCCTGTTCTCCTG GTCTTTCCTCCTACCGTTGGCCCCTTCGCCAAGATTGACGACGCACCTCTGCGATTTGACTTTAGCGGCCCTATC TCTGCTGAACAGCTATATACATGGATGAACCGTCAGCTTCCAGAGGGCCCGAAGCCGCCACTTGTTCGTCCGATC AACTACATGCGACTTGTCTCCGGCATAACCATTTTGATGGGTGCTGTGACCCTTTTTACAGTTTTGTCACCTTAT GTCCTTCCCATTGTTCGTAACCGGAACTTGTGGGCTGCTTTCAGTCTGATTGCCATCCTCCTATTCACAAGTGGC CACATGTTCAACCATATTCGCAAAGTCCCATATGTTGCCGGAGATGGTAGAGGTGGTATTAGCTACTTCGCTGGT GGATTTTCAAACCAGTTCGGCATGGAGACGCAGATTGTTGCTGCCATCTATGCCGTCCTATCTTTTGCGACAATT GCCCTTGCAATGAAGGTGCCCCGTATCGCAGACAACAAGGCACAACAGGTAGCTGTGATCATCTGGGGTTCCGTA CTCCTTGAGGATTTCCTATGTAAGCTGGCTTCGAGAGAGGTGTCAGAGTTACCCTATTACCACGCAAGCGTGATC ATCACTTCCGTTGCATCCCTTATGGAGCTCTCCACTGAGCCCTTCTTCACTGTAGTGCAGCAATATATGCTACAC AGACAACGTGCAGTTGTTGAGATGAGTGCAGCCTTTGTAAAAAGCCTTACGACCTGCCTTGCTTGTGCATGGGCT TCCAGGACCGGCCACAGCATTGGCGTGCTCCCATTTTCAATTGGTTATCTCTGTTATTCTTCCACACTCATCTGC GGCTATATACTAGCCCTACCGAGGGTTGCAGACGAGCAGAAGTTTTCTATGTTTCCCACAAAGATAAAGTCAAGA TCAGATTATTTCATGGGGAGATTCTCATGGCCGATGATAGGACTGTCCACAAATGTGTTCTTTCAGTCGGTGGTG AAACATCTTCTCACCCAGGGTGATTCTATGATGCTGGCAACAATGACGAGCTTAGAAGATCAAGGCATATATGCA CTAGCCTCTAATTACGGTGGTCTCCTGGCTCGCGTCTTGTTTCAGCCCATTGAAGAAAGCAGTCGAACGCTTTTT TCCTCACTGCTAAACTCTGGCGGGAGCGGGAATCTACGTGTAGAAAACATCAATGCTGCTAAAACTCAGTTGACA GAAGTTCTTCGTGCATATAGTCTGATGGCTGTTGTGGGATTTCCCCTCGGTCCAGTTCTGGCACCTCAATTGCTA CATCTGTTAGGCGGGCGCATCTGGGCTTCACCCAGGATCAGCAGCCTGCTTTCACTTTATTGCTATTATATACCA TTTCTGGCTTATAATGGTATAAGTGAAGCATTTGTCTCATCAGCAGCAAACTCAGCAGAATTACGCAGACAAGCG GTATGGATGGGTGTGTTTTCAGCATGCTTTGCATCCGCGGCGTACTTGTTCTTAAAAGTTGGCGCTCTCGGTGCC CACGGAATGGTTTATGCCAATATTGTTAACATGGCAGTTCGTATCGTCTGGAGCTTTTCCTTTATTCAGACATTC ATGTCTCGACACGGAAGCGGTATCGCTATTTCTGAACTTAGCCCACGGCCGCTTACCTGTATCGCCAGTATCACG ATGTCTATAGTTCTTAACTCAAGAGTTCTATATGCTCTTGATATCTACAGGACGAGAGATGCGCTGATACTTGGA GCTATGTATATTCTTCTCGTGTCTTATCTCGAGCGGAAATATTTGTTGATCTATTACACAAAAGCCCACGAGCTG GTGAAATTTAAAACATCCAGTACTCCAAAGTCCAAAAGCGAATAA |
| Gene | >Ani_SJS72_1|g4032.t1 ATGAAGCTCTTCAACCTTCTCTTGTCTTTTCTCTGCATGATCAGTTCCGCTTCTTGCGGCCTCGCAGACACAGAC AAGTTTGAGAGATATCGTTCACTCTCTCGCTCCGCCCCAATCGAACTGAACGACTCATCGTACGAAGAGATAACA TCTAAGCCTCGCGACTATCATGTCGCAGTGCTTTTGACAGCCGCAGACGCTCGCTATGGGTGTATTCTTTGTCGC GAATTTCAACCTGAGTGGGAGCTCATAGCACGAAGCTGGAACAAAGGTCCCAAGCCCGACGGACTTCAAATGCTC TTTGGGACCCTTGACTTTTCCGATGGAAAGGGGACCTTTCAGAAGGTATCCAGCAATACATGGCCTAGCAGTCTA GAATTTTCAACTGACACAATTGGCATTGAATAGTTGATGCTCCAAACTGCGCCTGTTCTCCTGGTCTTTCCTCCT ACCGTTGGCCCCTTCGCCAAGATTGACGACGCACCTCTGCGATTTGACTTTAGCGGGTAACTATATACTGAATCT ACTAGTCGATTGATTATCACTGACGTCGACCTACAGCCCTATCTCTGCTGAACAGCTATATACATGGATGAACCG TCAGCTTCCAGAGGGCCCGAAGCCGCCACTTGTTCGTCCGATCAACTACATGCGACTTGTCTCCGGCATAACCAT TTTGATGGGTGCTGTGACCCTTTTTACAGTTTTGTCACCTTATGTCCTTCCCATTGTTCGTAACCGGAACTTGTG GGCTGCTTTCAGTCTGATTGCCATCCTCCTATTCACAAGTGGCCACATGTTCAACCATATTCGCAAAGTCCCATA TGTTGCCGGAGATGGTAGAGGTGGTATTAGCTACTTCGCTGGTGGATTTTCAAACCAGTTCGGCATGGAGACGCA GATTGTTGCTGCCATCTGTACGTTGCCCTTCATAACATGCATACATCTAACCTCATATGTGGATCTGATGCTAAT TCGCTAATGCTGTCGACAGATGCCGTCCTATCTTTTGCGACAATTGCCCTTGCAATGAAGGTGCCCCGTATCGCA GACAACAAGGCACAACAGGTAGCTGTGATCATCTGGGGTTCCGTACTCCTTGGTATGTACAGCTTCCTTCTGAGT GTGTTCAAGACGAAGAATGGGGGATATCCGTTTTTTCTTCCGCCATTCTAGAGGATTTCCTATGTACGTTATCGG CCTGAGCTATTCAGTCCGACCAAGTGTGAACACGTTTGCTTGGGGTTAGCGGTCGTTCTAAGGTAGTAGCAGTAT GCTACTATCTCAACTCCTTTCCTTCGTCCAAGCTCCTCCGTTATCGTGTAGTTACTGTATAGTAACATGGTGGAT CAACTCTTCTTCCAAACGTCGAGAATCTGCTTAAACTGTCATCTTAGATGGTCAATGGAATGAACTATATAAGGG CGGGAGTCGCAAATTAGTTGTTTCATTGACCACTATTATTTATCGGGTATCAATCGTTTGTTCCAAACACTGGTC TACAGTGGGCTTATCTGCGACTTCATTTCAAGGGAGCCCGAGAGTTTCTTAACTTGTCGTGGCATCGCTGAGCCT AGTAAAGTGGCGGCATGCTCACTCTAAACTCTGCAATTCTCAAAACTATCGAAACTCAGTATGGAGTAAACTATT GCAACTTAGGTACACAAGGGTCAGACTCCGATTTTCTCGCACAGTGTATCAACATGAAATAATATAGCCGCCGCT ACAGCCACCTCATAGGTGCTTCCTTGTAGGCAGTGAGAAATTAGTCCTTCTTAGAGCAGGAAGCTCAATGGCCAG TGGCTCGGTGTCAACACACATGGCTTTCGCTTTATCGGCTTCGAATCGAGCACGAGTTATGCGCGTTGCATGTGC CAGGATGTAAAGTGACTCCTCCAATGTACTAAAGACCTGCGCAAAGAAGCTTCGAAAGAATCTCGGAACACCGGA TTATACAACATAAAAAGTGCTTAATTGATCTTGAAGGTAAGGTATATAATTACGTAACATTGTATAGACTTAGCC AATGCTGCGCACAAACAGTGCTTGTGCTAACTAAAACGAAGGGAGGAGCTTAGACACTGGCAGATAAACGCCAGA GCACGGGAACGGGAACTTACCACTAACTCGTACACTGAAAGCACGTGGCCTTTTCGGCTGGACCCCATATACTTC CTCCCATTGAGTGGTATTTGGATTTCTTTCCCCGGGCTTATCTTTATTCTATTCCTTGCCCCTCTCCCCCGAAAG GGGTTCTACCAGTGAGAATCAATTCTTCTGCTGCGAGCCCAAGCTGCAGGGCCAGCTTTACGAAATCACAGAGAT TCTTAGACAAAAGTCATCGATGCCCGGGAGCCTTTTCCCGTCCACATGTCACAAGTAGATGAGAATGTCAGCGCA ATGCTGGCATCATCAGCATCCGGGACGACGATGCTGATCGTCGTTCAATTGGCCTCTAGGATATTCACTTTCACC GCAAATCAGCTGGTCTTAAGGAGTTTGCCTCCAGCCATCATGGGTGTTGCGTCCCAACTGGAGCTATATTTCATC TCGATATTATATTTCTCCAGGGAAAGTATCAGAATGGCTATTCAAAGACAGCCATTGCAACTCAAGCCCCTCACC ATGGTTTCCCACAAGGATAGCACTGGTACAGCTCCCAAAAAGGGCAATGATGTATCTGAGGCCCGAAACATAGCC TTGCAGTCAGTAGTGAACATGTCCTACTTGAGCCTCGCCCTGGGGTTTTTGTTCGCTATGGCATTTGCTACATCT TATATACAGCTGGCTTCGAGAGAGGTGTCAGAGTTACCCTATTACCACGCAAGCGTGATCATCACTTCCGTTGCA TCCCTTATGGAGCTCTCCACTGAGCCCTTCTTCACTGTAGTGCAGCAATATATGCTACACAGACAACGTGCAGTT GTTGAGATGAGTGCAGCCTTTGTAAAAAGCCTTACGACCTGCCTTGCTTGTGCATGGGCTTCCAGGACCGGCCAC AGCATTGGCGTGCTCCCATTTTCAATTGGTTATCTCTGTTATTCTTCCACACTCATCTGCGGCTATATACTAGCC CTACCGAGGGTTGCAGACGAGCAGAAGTTTTCTATGTTTCCCACAAAGATAAAGTCAAGGTAGGCCATGGAAAAT TAAACTTGCAATGTTCTATCTGATAACAAATGTCTTGGCACAGATCAGATTATTTCATGGGGAGATTCTCATGGC CGATGATAGGACTGTCCACAAATGTGTTCTTTCAGTCGGTGGTGAAACATCTTCTCACCCAGGGTGATTCTATGA TGCTGGCAACAATGACGAGCTTAGAAGATCAAGGCATATATGCACTAGCCTCTAATTACGGTGGTCTCCTGGCTC GCGTCTTGTTTCAGCCCATTGAAGAAAGCAGTCGAACGCTTTTTTCCTCACTGCTAAACTCTGGCGGGAGCGGGA ATCTACGTGTAGAAAACATCAATGCTGCTAAAACTCAGTTGACAGAAGTTCTTCGTGCATATAGTCTGATGGCTG TTGTGGGATTTCCCCTCGGTCCAGTTCTGGCACCTCAATTGCTACATCTGTTAGGCGGGCGCATCTGGGCTTCAC CCAGGATCAGCAGCCTGCTTTCACTTTATTGCTATTATATACCATTTCTGGCTTATAATGGTATAAGTGAAGCAT TTGTCTCATCAGCAGCAAACTCAGCAGAATTACGCAGACAAGCGGTATGGATGGGTGTGTTTTCAGCATGCTTTG CATCCGCGGCGTACTTGTTCTTAAAAGTTGGCGCTCTCGGTGCCCACGGAATGGTTTATGCCAATATTGTTAACA TGGCAGTTCGTATCGTCTGGAGCTTTTCCTTTATTCAGACATTCATGTCTCGACACGGAAGCGGTATCGCTATTT CTGAACTTAGCCCACGGCCGCTTACCTGTATCGCCAGTATCACGATGTCTATAGTTCTTAACTCAAGAGTTCTAT ATGCTCTTGATATCTACAGGACGAGAGATGCGCTGATACTTGGAGCTATGTATATTCTTCTCGTGTAAGTTCCAC AACTTTATATGCAAGCTACAGTCTAATGGTGAGGATAGGTCTTATCTCGAGCGGAAATATTTGTTGATCTATTAC ACAAAAGCCCACGAGCTGGTGAAATTTAAAACATCCAGTACTCCAAAGTCCAAAAGCGAATAA |