© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g400.t1 |
| Gene name | |
| Location | scaffold_002:225393..226572 |
| Strand | + |
| Gene length (bp) | 1179 |
| Transcript length (bp) | 1110 |
| Coding sequence length (bp) | 1110 |
| Protein length (aa) | 370 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08551 | DUF1751 | Eukaryotic integral membrane protein (DUF1751) | 2.9E-29 | 53 | 151 |
| PF01694 | Rhomboid | Rhomboid family | 4.6E-05 | 60 | 208 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0004252 | serine-type endopeptidase activity | Yes |
| GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | Yes |
| GO:0051179 | localization | No |
| GO:0048193 | Golgi vesicle transport | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0008233 | peptidase activity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0008236 | serine-type peptidase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0017171 | serine hydrolase activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0016192 | vesicle-mediated transport | No |
| GO:0003824 | catalytic activity | No |
| GO:0006810 | transport | No |
| GO:0016787 | hydrolase activity | No |
| GO:0004175 | endopeptidase activity | No |
| GO:0005575 | cellular_component | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 31 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 30 | 17 |
| 2 | 56 | 78 | 22 |
| 3 | 99 | 121 | 22 |
| 4 | 131 | 153 | 22 |
| 5 | 174 | 196 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g400.t1 MAPRVNIPPATRICLISLLTLSLLYNIARWRQLDTTPGAPAITPIIPYLTLVPSQFLFYPWTLLTATLVEQNIFT VLLNAATLFYGGKYLERAWGSREFAKFILAIAVIPNVTIVPLYILGAALKSGSSSGLTQICGGISIQASFLVAFK QLVPEHTVTIFKGLVKMRVKHFPALFLFLNTISGIVFGTHVAAILAWLGLLTSWTYLRFFKRQPDLTGTSTDGLG IKGDASETFAFACLFPDVLQPPIAFLSDQVYALLVAIRICTPFSEEDIASGNQQVLARGEAGLPSILSNHRNGRA MAKREEAERRRALALKALDQRLQAAAAGRVQPATSAANQQGSSHAQTPTPTVSAGQSMLGETSYTPDHA* |
| Coding | >Ani_SJS72_1|g400.t1 ATGGCGCCTCGAGTCAATATCCCTCCAGCGACCCGCATCTGTCTTATCAGTCTTCTCACCCTCTCCTTGCTGTAT AATATCGCCCGATGGCGGCAACTTGACACCACGCCCGGCGCACCTGCCATCACCCCGATCATACCCTATTTGACG CTCGTTCCTTCACAATTTCTTTTCTATCCGTGGACCCTCCTTACCGCGACACTTGTGGAGCAAAACATCTTCACC GTGCTTTTGAACGCGGCCACTCTCTTTTATGGCGGGAAATACTTGGAGCGCGCATGGGGATCCCGGGAGTTTGCG AAGTTCATCCTCGCCATCGCAGTCATCCCGAACGTAACGATCGTTCCGCTTTATATTCTAGGAGCTGCCCTTAAA AGTGGCTCCAGCAGCGGCCTCACGCAGATATGCGGCGGTATCTCGATTCAAGCATCCTTCTTGGTCGCCTTCAAG CAGCTCGTCCCGGAGCATACGGTGACTATCTTCAAAGGCTTGGTCAAAATGCGGGTGAAGCACTTTCCCGCGCTG TTTTTGTTCCTGAACACCATCAGCGGAATTGTCTTCGGCACGCATGTCGCAGCGATTCTTGCGTGGCTCGGCCTC TTGACAAGTTGGACCTACCTGCGCTTCTTCAAACGTCAGCCTGACCTTACTGGCACATCGACCGACGGGCTAGGC ATCAAGGGTGATGCCAGCGAGACTTTTGCATTCGCATGTCTCTTTCCGGATGTGCTTCAGCCGCCAATCGCGTTC CTGTCTGATCAAGTTTATGCTCTCCTGGTTGCCATCAGGATCTGTACACCCTTCTCCGAGGAAGACATTGCCTCG GGCAACCAGCAGGTTCTGGCACGGGGCGAGGCAGGTCTTCCCAGTATTCTTTCCAACCATCGCAACGGACGGGCC ATGGCGAAGCGGGAAGAAGCAGAGCGCAGACGTGCTCTAGCACTCAAGGCCCTCGACCAGAGACTTCAAGCAGCT GCTGCGGGAAGAGTGCAGCCGGCGACGTCTGCAGCGAACCAGCAAGGATCCAGCCATGCTCAGACTCCGACACCT ACGGTTTCAGCGGGCCAGAGTATGTTGGGAGAAACAAGCTACACCCCCGACCATGCGTGA |
| Transcript | >Ani_SJS72_1|g400.t1 ATGGCGCCTCGAGTCAATATCCCTCCAGCGACCCGCATCTGTCTTATCAGTCTTCTCACCCTCTCCTTGCTGTAT AATATCGCCCGATGGCGGCAACTTGACACCACGCCCGGCGCACCTGCCATCACCCCGATCATACCCTATTTGACG CTCGTTCCTTCACAATTTCTTTTCTATCCGTGGACCCTCCTTACCGCGACACTTGTGGAGCAAAACATCTTCACC GTGCTTTTGAACGCGGCCACTCTCTTTTATGGCGGGAAATACTTGGAGCGCGCATGGGGATCCCGGGAGTTTGCG AAGTTCATCCTCGCCATCGCAGTCATCCCGAACGTAACGATCGTTCCGCTTTATATTCTAGGAGCTGCCCTTAAA AGTGGCTCCAGCAGCGGCCTCACGCAGATATGCGGCGGTATCTCGATTCAAGCATCCTTCTTGGTCGCCTTCAAG CAGCTCGTCCCGGAGCATACGGTGACTATCTTCAAAGGCTTGGTCAAAATGCGGGTGAAGCACTTTCCCGCGCTG TTTTTGTTCCTGAACACCATCAGCGGAATTGTCTTCGGCACGCATGTCGCAGCGATTCTTGCGTGGCTCGGCCTC TTGACAAGTTGGACCTACCTGCGCTTCTTCAAACGTCAGCCTGACCTTACTGGCACATCGACCGACGGGCTAGGC ATCAAGGGTGATGCCAGCGAGACTTTTGCATTCGCATGTCTCTTTCCGGATGTGCTTCAGCCGCCAATCGCGTTC CTGTCTGATCAAGTTTATGCTCTCCTGGTTGCCATCAGGATCTGTACACCCTTCTCCGAGGAAGACATTGCCTCG GGCAACCAGCAGGTTCTGGCACGGGGCGAGGCAGGTCTTCCCAGTATTCTTTCCAACCATCGCAACGGACGGGCC ATGGCGAAGCGGGAAGAAGCAGAGCGCAGACGTGCTCTAGCACTCAAGGCCCTCGACCAGAGACTTCAAGCAGCT GCTGCGGGAAGAGTGCAGCCGGCGACGTCTGCAGCGAACCAGCAAGGATCCAGCCATGCTCAGACTCCGACACCT ACGGTTTCAGCGGGCCAGAGTATGTTGGGAGAAACAAGCTACACCCCCGACCATGCGTGA |
| Gene | >Ani_SJS72_1|g400.t1 ATGGCGCCTCGAGTCAATATCCCTCCAGCGACCCGCATCTGTCTTATCAGTCTTCTCACCCTCTCCTTGCTGTAT AATATCGCCCGATGGCGGCAACTTGACACCACGCCCGGCGCACCTGCCATCACCCCGATCATACCCTATTTGACG CTCGTTCCTTCACAATTTCTTTTCTATCCGTGGACCCTCCTTACCGCGACACTTGTGGAGCAAAACATCTTCACC GTGCTTTTGAACGCGGCCACTCTCTTTTATGGCGGGAAATACTTGGAGCGCGCATGGGGATCCCGGGAGTTTGCG AAGTTCATCCTCGCCATCGCAGTCATCCCGAACGTAACGATCGTTCCGCTTTATATTCTAGGAGCTGCCCTTAAA AGTGGCTCCAGCAGCGGGTACGCCTTGTTTTCTCATGACGAATGCACAACATCTTGCGCTTTCCTTACTGACTCA CCGACTTCAAGCCTCACGCAGATATGCGGCGGTATCTCGATTCAAGCATCCTTCTTGGTCGCCTTCAAGCAGCTC GTCCCGGAGCATACGGTGACTATCTTCAAAGGCTTGGTCAAAATGCGGGTGAAGCACTTTCCCGCGCTGTTTTTG TTCCTGAACACCATCAGCGGAATTGTCTTCGGCACGCATGTCGCAGCGATTCTTGCGTGGCTCGGCCTCTTGACA AGTTGGACCTACCTGCGCTTCTTCAAACGTCAGCCTGACCTTACTGGCACATCGACCGACGGGCTAGGCATCAAG GGTGATGCCAGCGAGACTTTTGCATTCGCATGTCTCTTTCCGGATGTGCTTCAGCCGCCAATCGCGTTCCTGTCT GATCAAGTTTATGCTCTCCTGGTTGCCATCAGGATCTGTACACCCTTCTCCGAGGAAGACATTGCCTCGGGCAAC CAGCAGGTTCTGGCACGGGGCGAGGCAGGTCTTCCCAGTATTCTTTCCAACCATCGCAACGGACGGGCCATGGCG AAGCGGGAAGAAGCAGAGCGCAGACGTGCTCTAGCACTCAAGGCCCTCGACCAGAGACTTCAAGCAGCTGCTGCG GGAAGAGTGCAGCCGGCGACGTCTGCAGCGAACCAGCAAGGATCCAGCCATGCTCAGACTCCGACACCTACGGTT TCAGCGGGCCAGAGTATGTTGGGAGAAACAAGCTACACCCCCGACCATGCGTGA |