© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g3977.t1 |
| Gene name | |
| Location | scaffold_023:224321..225786 |
| Strand | - |
| Gene length (bp) | 1465 |
| Transcript length (bp) | 1359 |
| Coding sequence length (bp) | 1359 |
| Protein length (aa) | 453 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12051 | DUF3533 | Protein of unknown function (DUF3533) | 5.6E-136 | 43 | 434 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 40 | 62 | 22 |
| 2 | 237 | 259 | 22 |
| 3 | 290 | 312 | 22 |
| 4 | 332 | 354 | 22 |
| 5 | 361 | 383 | 22 |
| 6 | 422 | 444 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g3977.t1 MSSDKVQMAEAGDKAEVPPAAVSFFDPALKAVRRSVFFQWGRTVLILCVFILCILSLFWAVQFHAESRFSALTVW VVDFDGQLEPYRNETPIVGPIVTEVVDHILDTSTEHLGYTIKSPADFNNDPWAVRQSVYDEHAYAAVIINANATA LLRNAVINGNSSYDPYGAAEFVTISARDPTTYYDYINPFLYDLDMAVRSSFGLRWIQYVAQQGYNISQVPQAINP GIGFTSVDLRPFAPAVITPAVSIGLIYLIILAFFNTPFMMPIHIQFIKGNHPPLKIPQWLLWRILSNIGTYFFLS LFYSFVSLAFQIPFSNPSAPDTQVAYNPNGYGHGSFVVYWMLNWAGMCALGFPCENMAMIIGLPWSALFLIFWVI TNVATGFYALDLAPGFFRWGYAWPLHRIVEAIRTILFDTHSRIGLDFGVLFAWIGFSICLFPLAAAFMNWKIKRG WA* |
| Coding | >Ani_SJS72_1|g3977.t1 ATGAGCTCCGATAAGGTACAAATGGCCGAGGCTGGCGACAAGGCTGAAGTCCCTCCTGCGGCTGTCTCGTTCTTC GATCCCGCTCTGAAAGCTGTTCGTCGCAGCGTGTTCTTCCAGTGGGGCCGGACAGTCTTAATACTCTGTGTCTTC ATCCTTTGCATCCTATCACTATTCTGGGCCGTACAATTCCACGCAGAGTCTCGATTTTCTGCTTTGACGGTTTGG GTTGTCGACTTCGATGGCCAGCTGGAGCCCTACCGAAATGAGACTCCAATTGTGGGCCCGATCGTGACAGAGGTT GTGGACCATATACTTGATACGAGCACCGAGCATCTAGGATACACGATCAAGTCTCCTGCGGACTTCAACAATGAC CCCTGGGCTGTGCGCCAGTCCGTGTATGACGAGCATGCTTATGCAGCTGTGATTATCAATGCCAATGCCACTGCT CTTCTTCGCAACGCTGTCATCAACGGAAACTCGTCCTACGACCCCTACGGTGCGGCCGAGTTCGTCACGATCAGT GCACGCGATCCGACCACCTATTACGACTACATCAATCCCTTTTTATACGATCTCGACATGGCCGTCCGGTCGTCC TTTGGACTACGCTGGATACAGTACGTCGCTCAGCAAGGGTACAACATCAGTCAAGTGCCACAGGCCATCAACCCA GGAATTGGATTTACCTCCGTTGACCTTCGACCCTTTGCGCCAGCCGTCATAACTCCGGCCGTGAGCATCGGTCTC ATCTATCTGATCATCCTTGCCTTCTTCAACACCCCGTTCATGATGCCCATACACATTCAGTTCATCAAGGGCAAC CACCCTCCGCTGAAAATCCCACAGTGGCTCCTATGGCGCATCCTGTCCAACATTGGCACATACTTCTTCCTATCA CTCTTCTACTCCTTTGTGTCCCTGGCCTTCCAGATCCCGTTCAGCAACCCCTCCGCACCCGACACTCAGGTAGCC TACAACCCCAACGGCTACGGCCACGGCTCCTTCGTTGTCTATTGGATGTTGAACTGGGCGGGCATGTGTGCCCTC GGTTTCCCATGTGAGAACATGGCGATGATTATCGGTCTTCCTTGGAGTGCGCTCTTCCTCATCTTCTGGGTCATC ACCAACGTGGCCACTGGTTTTTATGCTTTGGATCTGGCTCCAGGCTTCTTCAGATGGGGTTACGCCTGGCCTCTT CACAGGATTGTCGAGGCAATTCGCACTATTCTCTTCGATACGCATTCTCGGATCGGACTTGACTTCGGTGTCCTA TTCGCCTGGATCGGTTTCTCGATCTGTCTATTCCCGCTCGCTGCAGCGTTTATGAATTGGAAGATCAAGCGGGGC TGGGCGTGA |
| Transcript | >Ani_SJS72_1|g3977.t1 ATGAGCTCCGATAAGGTACAAATGGCCGAGGCTGGCGACAAGGCTGAAGTCCCTCCTGCGGCTGTCTCGTTCTTC GATCCCGCTCTGAAAGCTGTTCGTCGCAGCGTGTTCTTCCAGTGGGGCCGGACAGTCTTAATACTCTGTGTCTTC ATCCTTTGCATCCTATCACTATTCTGGGCCGTACAATTCCACGCAGAGTCTCGATTTTCTGCTTTGACGGTTTGG GTTGTCGACTTCGATGGCCAGCTGGAGCCCTACCGAAATGAGACTCCAATTGTGGGCCCGATCGTGACAGAGGTT GTGGACCATATACTTGATACGAGCACCGAGCATCTAGGATACACGATCAAGTCTCCTGCGGACTTCAACAATGAC CCCTGGGCTGTGCGCCAGTCCGTGTATGACGAGCATGCTTATGCAGCTGTGATTATCAATGCCAATGCCACTGCT CTTCTTCGCAACGCTGTCATCAACGGAAACTCGTCCTACGACCCCTACGGTGCGGCCGAGTTCGTCACGATCAGT GCACGCGATCCGACCACCTATTACGACTACATCAATCCCTTTTTATACGATCTCGACATGGCCGTCCGGTCGTCC TTTGGACTACGCTGGATACAGTACGTCGCTCAGCAAGGGTACAACATCAGTCAAGTGCCACAGGCCATCAACCCA GGAATTGGATTTACCTCCGTTGACCTTCGACCCTTTGCGCCAGCCGTCATAACTCCGGCCGTGAGCATCGGTCTC ATCTATCTGATCATCCTTGCCTTCTTCAACACCCCGTTCATGATGCCCATACACATTCAGTTCATCAAGGGCAAC CACCCTCCGCTGAAAATCCCACAGTGGCTCCTATGGCGCATCCTGTCCAACATTGGCACATACTTCTTCCTATCA CTCTTCTACTCCTTTGTGTCCCTGGCCTTCCAGATCCCGTTCAGCAACCCCTCCGCACCCGACACTCAGGTAGCC TACAACCCCAACGGCTACGGCCACGGCTCCTTCGTTGTCTATTGGATGTTGAACTGGGCGGGCATGTGTGCCCTC GGTTTCCCATGTGAGAACATGGCGATGATTATCGGTCTTCCTTGGAGTGCGCTCTTCCTCATCTTCTGGGTCATC ACCAACGTGGCCACTGGTTTTTATGCTTTGGATCTGGCTCCAGGCTTCTTCAGATGGGGTTACGCCTGGCCTCTT CACAGGATTGTCGAGGCAATTCGCACTATTCTCTTCGATACGCATTCTCGGATCGGACTTGACTTCGGTGTCCTA TTCGCCTGGATCGGTTTCTCGATCTGTCTATTCCCGCTCGCTGCAGCGTTTATGAATTGGAAGATCAAGCGGGGC TGGGCGTGA |
| Gene | >Ani_SJS72_1|g3977.t1 ATGAGCTCCGATAAGGTACAAATGGCCGAGGCTGGCGACAAGGCTGAAGTCCCTCCTGCGGCTGTCTCGTTCTTC GATCCCGCTCTGAAAGCTGTTCGTCGCAGCGTGTTCTTCCAGTGGGGCCGGACAGGTTAGTGCCAGACCCATCAA TCATTATTGGGTTCTTTTGCTAATTTGTATGCTATAGTCTTAATACTCTGTGTCTTCATCCTTTGCATCCTATCA CTATTCTGGGCCGTACAATTCCACGCAGAGTCTCGATTTTCTGCTTTGACGGTTTGGGTTGTCGACTTCGATGGC CAGCTGGAGCCCTACCGAAATGAGACTCCAATTGTGGGCCCGATCGTGACAGAGGTTGTGGACCATATACTTGAT ACGAGCACCGAGCATCTAGGATACACGATCAAGTCTCCTGCGGACTTCAACAATGACCCCTGGGCTGTGCGCCAG TCCGTGTATGACGAGCATGCTTATGCAGCTGTGATTATCAATGCCAATGCCACTGCTCTTCTTCGCAACGCTGTC ATCAACGGAAACTCGTCCTACGACCCCTACGGTGCGGCCGAGTTCGTCACGATCAGTGCACGCGATCCGACCACC TATTACGACTACATCAATCCCTTTTTATACGATCTCGACATGGCCGTCCGGTCGTCCTTTGGACTACGCTGGATA CAGTACGTCGCTCAGCAAGGGTACAACATCAGTCAAGTGCCACAGGCCATCAACCCAGGAATTGGATTTACCTCC GTTGACCTTCGACCCTTTGCGCCAGCCGTCATAACTCCGGCCGTGAGCATCGGTCTCATCTATCTGATCATCCTT GCCTTCTTCAACACCCCGTTCATGATGCCCATACACATTCAGTTCATCAAGGGCAACCACCCTCCGCTGAAAATC CCACAGTGGCTCCTATGGCGCATCCTGTCCAACATTGGCACATACTTCTTCCTATCACTCTTCTACTCCTTTGTG TCCCTGGCCTTCCAGATCCCGTTCAGCAACCCCTCCGCACCCGACACTCAGGTAGCCTACAACCCCAACGGCTAC GGCCACGGCTCCTTCGTTGTCTATTGGATGTTGAACTGGGCGGGCATGTGTGCCCTCGGTTTCCCATGTGAGAAC ATGGCGATGATTATCGGTCTTCCTTGGAGTGCGCTCTTCCTCATCTTCTGGGTCATCACCAACGTGGCCACTGGT TTTTATGCTTTGGATCTGGCTCCAGGCTTCTTCAGATGGGGTTACGCCTGGCCTCTTCACAGGAGTAAGTTGCTC CCTCATCTCTCGCAGTTAAACAATCTAACATATGGTAGTTGTCGAGGCAATTCGCACTATTCTCTTCGATACGCA TTCTCGGATCGGACTTGACTTCGGTGTCCTATTCGCCTGGATCGGTTTCTCGATCTGTCTATTCCCGCTCGCTGC AGCGTTTATGAATTGGAAGATCAAGCGGGGCTGGGCGTGA |