Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g3961.t1
Gene name
Location	scaffold_023:174685..175907
Strand	+
Gene length (bp)	1222
Transcript length (bp)	1050
Coding sequence length (bp)	1050
Protein length (aa)	350

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00153	Mito_carr	Mitochondrial carrier protein	1.9E-22	34	145
PF00153	Mito_carr	Mitochondrial carrier protein	1.4E-21	154	243
PF00153	Mito_carr	Mitochondrial carrier protein	7.2E-17	264	346

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 46	0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g3961.t1 MQPVAHQSGGASGDPLPPSLPTEAIEEKASVSSLGSWNHLVAGATGGMVTAIVTSPLDVLRTRLQTDYYQTQGVN RSIPTHAHVRQSFVRTSIRHFRETFGILFSIHRVEGWRGMFKGLGPSLTGVVPASAVKFYTYGNCKRLLPEILGC DKDTTLVHAMSAACAGIATGSATNPIWVVKTRLQLDKAGARRYKNSLDCTKQILQQEGPKGLYRGLTASYLGTIE TTLHLAMYERIKGLISKEVNLDKNSDSNKFVQGLALSGASGLSKLFACLIAYPHEVIRTRLRQAPMADGRQKYTS ILQCARLILKEEGVIALYGGLTAHLLRTVPSAAITIGTYELVLKVLEGR*
Coding	>Ani_SJS72_1\|g3961.t1 ATGCAGCCTGTTGCTCACCAGTCGGGAGGCGCGTCTGGAGATCCGCTCCCGCCGTCCTTGCCGACGGAGGCAATC GAAGAGAAGGCCAGCGTGTCTAGCTTGGGATCATGGAATCATTTGGTTGCTGGCGCTACCGGCGGCATGGTCACT GCTATCGTTACGAGTCCTCTTGATGTTCTCCGCACGCGGTTGCAAACCGATTACTATCAGACACAGGGCGTGAAC CGCTCAATTCCCACACACGCGCACGTTCGTCAGTCATTCGTTCGGACTTCTATCCGCCATTTTCGCGAGACGTTC GGCATTCTCTTCTCTATCCATCGTGTTGAAGGCTGGCGGGGTATGTTCAAGGGTCTTGGACCCAGCTTGACGGGT GTCGTCCCGGCCAGTGCGGTGAAGTTCTACACATACGGAAACTGCAAACGCCTGCTGCCGGAGATCTTGGGTTGC GACAAGGATACTACTCTGGTACATGCCATGTCCGCAGCATGCGCTGGTATCGCCACGGGCTCAGCTACCAACCCT ATTTGGGTGGTCAAAACTCGTCTTCAGTTGGATAAGGCTGGTGCTCGCCGGTACAAGAACAGTCTTGATTGTACC AAGCAGATTCTGCAACAAGAGGGTCCCAAGGGTCTCTACAGAGGTCTGACGGCCAGCTACTTGGGCACAATCGAA ACAACACTGCATCTGGCCATGTATGAGCGCATCAAGGGACTTATTTCCAAGGAGGTCAATTTGGATAAGAACTCG GATTCGAACAAGTTTGTTCAGGGCCTTGCTCTGAGTGGAGCGTCGGGATTGTCGAAGCTGTTTGCTTGCTTGATC GCGTATCCCCATGAGGTTATCCGTACTCGACTTCGACAGGCTCCGATGGCGGACGGTCGCCAGAAGTATACTAGT ATCCTCCAGTGTGCGCGGTTGATCTTGAAGGAAGAGGGAGTGATCGCGCTGTATGGAGGATTGACGGCACACCTT CTCCGCACGGTGCCGTCGGCAGCGATCACCATCGGGACATACGAGCTGGTTCTCAAGGTCCTTGAGGGACGTTAA
Transcript	>Ani_SJS72_1\|g3961.t1 ATGCAGCCTGTTGCTCACCAGTCGGGAGGCGCGTCTGGAGATCCGCTCCCGCCGTCCTTGCCGACGGAGGCAATC GAAGAGAAGGCCAGCGTGTCTAGCTTGGGATCATGGAATCATTTGGTTGCTGGCGCTACCGGCGGCATGGTCACT GCTATCGTTACGAGTCCTCTTGATGTTCTCCGCACGCGGTTGCAAACCGATTACTATCAGACACAGGGCGTGAAC CGCTCAATTCCCACACACGCGCACGTTCGTCAGTCATTCGTTCGGACTTCTATCCGCCATTTTCGCGAGACGTTC GGCATTCTCTTCTCTATCCATCGTGTTGAAGGCTGGCGGGGTATGTTCAAGGGTCTTGGACCCAGCTTGACGGGT GTCGTCCCGGCCAGTGCGGTGAAGTTCTACACATACGGAAACTGCAAACGCCTGCTGCCGGAGATCTTGGGTTGC GACAAGGATACTACTCTGGTACATGCCATGTCCGCAGCATGCGCTGGTATCGCCACGGGCTCAGCTACCAACCCT ATTTGGGTGGTCAAAACTCGTCTTCAGTTGGATAAGGCTGGTGCTCGCCGGTACAAGAACAGTCTTGATTGTACC AAGCAGATTCTGCAACAAGAGGGTCCCAAGGGTCTCTACAGAGGTCTGACGGCCAGCTACTTGGGCACAATCGAA ACAACACTGCATCTGGCCATGTATGAGCGCATCAAGGGACTTATTTCCAAGGAGGTCAATTTGGATAAGAACTCG GATTCGAACAAGTTTGTTCAGGGCCTTGCTCTGAGTGGAGCGTCGGGATTGTCGAAGCTGTTTGCTTGCTTGATC GCGTATCCCCATGAGGTTATCCGTACTCGACTTCGACAGGCTCCGATGGCGGACGGTCGCCAGAAGTATACTAGT ATCCTCCAGTGTGCGCGGTTGATCTTGAAGGAAGAGGGAGTGATCGCGCTGTATGGAGGATTGACGGCACACCTT CTCCGCACGGTGCCGTCGGCAGCGATCACCATCGGGACATACGAGCTGGTTCTCAAGGTCCTTGAGGGACGTTAA
Gene	>Ani_SJS72_1\|g3961.t1 ATGCAGCCTGTTGCTCACCAGTCGGGAGGCGCGTCTGGAGATCCGCTCCCGCCGTCCTTGCCGACGGAGGCAATC GAAGAGAAGGCCAGCGTGTCTAGCTTGGGATCATGGAATCATTTGGTTGCTGGCGCGTGAGTTGATTCAATGCTA TCATTGAGAAGCTGAATACTGACGTTTTATTATAGTACCGGCGGCATGGTCACTGCTATCGTTACGAGTCCTCTT GATGTTCTCCGCACGCGGTAGGATAAGCCTTCAACTCAAGCAACAACCCAGCTTTGCATGCTAACGTATCTTGTG CTTCCTAGGTTGCAAACCGATTACTATCAGACACAGGGCGTGAACCGCTCAATTCCCACACACGCGCACGTTCGT CAGTCATTCGTTCGGACTTCTATCCGCCATTTTCGCGAGACGTTCGGCATTCTCTTCTCTATCCATCGTGTTGAA GGCTGGCGGGGTATGTTCAAGGGTCTTGGACCCAGCTTGACGGGTGTCGTCCCGGCCAGTGCGGTGAAGTTCTAC ACATACGGAAACTGCAAACGCCTGCTGCCGGAGATCTTGGGTTGCGACAAGGATACTACTCTGGTACATGCCATG TCCGCAGCATGCGCTGGTATCGCCACGGGCTCAGCTACCAACCCTATTTGGGTGGTCAAAACTCGTCTTCAGTTG GATAAGGCTGGTGCTCGCCGGTACAAGAACAGTCTTGATTGTACCAAGCAGATTCTGCAACAAGAGGGTCCCAAG GGTCTCTACAGAGGTCTGACGGCCAGCTACTTGGGCACAATCGAAACAACACTGCATCTGGCCATGTATGAGCGC ATCAAGGGACTTATTTCCAAGGAGGTCAATTTGGATAAGAACTCGGATTCGAACAAGTTTGTTCAGGGCCTTGCT CTGAGTGGAGCGTCGGGATTGTCGAAGCTGTTTGCTTGCTTGATCGCGTATCCCCATGAGGTGAGTTGACGCGTC GCGAATCCCAGCATATGCATCTTCTGACATTTTGCAGGTTATCCGTACTCGACTTCGACAGGCTCCGATGGCGGA CGGTCGCCAGAAGTATACTAGTATCCTCCAGTGTGCGCGGTTGATCTTGAAGGAAGAGGGAGTGATCGCGCTGTA TGGAGGATTGACGGCACACCTTCTCCGCACGGTGCCGTCGGCAGCGATCACCATCGGGACATACGAGCTGGTTCT CAAGGTCCTTGAGGGACGTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail