© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g3958.t1 |
| Gene name | |
| Location | scaffold_023:167715..169020 |
| Strand | + |
| Gene length (bp) | 1305 |
| Transcript length (bp) | 1305 |
| Coding sequence length (bp) | 1305 |
| Protein length (aa) | 435 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02666 | PS_Dcarbxylase | Phosphatidylserine decarboxylase | 1.7E-55 | 185 | 398 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008654 | phospholipid biosynthetic process | Yes |
| GO:0004609 | phosphatidylserine decarboxylase activity | Yes |
| GO:0006644 | phospholipid metabolic process | No |
| GO:0019637 | organophosphate metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0008152 | metabolic process | No |
| GO:0006793 | phosphorus metabolic process | No |
| GO:0044255 | cellular lipid metabolic process | No |
| GO:0006796 | phosphate-containing compound metabolic process | No |
| GO:0090407 | organophosphate biosynthetic process | No |
| GO:0016831 | carboxy-lyase activity | No |
| GO:0009058 | biosynthetic process | No |
| GO:0003674 | molecular_function | No |
| GO:0009987 | cellular process | No |
| GO:0016830 | carbon-carbon lyase activity | No |
| GO:0006629 | lipid metabolic process | No |
| GO:0008610 | lipid biosynthetic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0016829 | lyase activity | No |
| GO:0044237 | cellular metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g3958.t1 MFSIINLPSRSSGAVSSTSSSKMRYAPIVNELLQLLDKSFPYASGMEALEQAIQSALQYRIVEMESYGLTSAKGF LNFATWMVDGWIPTESAKGRDIYYILCIFYFVFDQVPLKDCQTAIRPESVGQDLSELSQWMVKFAKEVGSHMDRP ESLNEASLTSFWNAPSFHVFEADESKTEGGKWKNFNQFFCRHLKDGARPIDGEGDDSIVIFPADSTFSGYWDITD DSLVELKGLPWHIGDLLGPYKSDYGDSFKGGVWLHSFLNSFDYHRQHAPVGGTIKVIDTIDGAAYLDVEYQPDSR SLMPKRPMRPVYSSGPVFRGAEATDKEGYQFLQARGIIIIENDKIGTVAVLPIGMAQVSSVVVRDDLKPGATINK GDEISHFEFGGSDIVVMFQGGKIDPHTLPQPLSRKSEEPLYEHHNYGEMLVKAKSKSKS* |
| Coding | >Ani_SJS72_1|g3958.t1 ATGTTCAGTATAATCAATTTGCCTAGTCGCTCATCCGGCGCAGTGTCCAGCACTTCGAGCTCCAAAATGCGTTAC GCACCCATCGTTAACGAGCTTCTCCAGTTACTCGACAAGTCATTTCCTTATGCTTCAGGAATGGAGGCCCTTGAA CAAGCTATCCAATCTGCGCTTCAGTACAGGATTGTTGAGATGGAAAGCTACGGACTCACCTCTGCCAAAGGGTTT CTAAACTTTGCAACCTGGATGGTTGACGGCTGGATACCCACCGAGTCAGCAAAGGGCAGAGACATCTACTATATT TTGTGCATCTTCTATTTCGTGTTTGACCAGGTTCCACTCAAGGATTGTCAAACTGCGATTAGGCCCGAATCTGTG GGGCAAGATCTATCTGAGCTCTCCCAATGGATGGTGAAGTTTGCCAAGGAGGTTGGAAGCCACATGGACCGACCA GAGTCGTTGAACGAAGCATCGCTCACTTCCTTCTGGAATGCTCCAAGCTTCCATGTATTCGAGGCGGATGAATCC AAAACCGAAGGGGGGAAGTGGAAGAACTTCAATCAGTTCTTCTGTCGTCATCTCAAAGATGGCGCACGGCCCATC GATGGCGAGGGTGACGACAGCATTGTCATCTTTCCTGCGGATTCAACCTTCTCCGGATACTGGGATATCACTGAT GATTCATTGGTCGAGCTGAAAGGTCTTCCTTGGCATATAGGCGATCTCCTTGGGCCGTACAAGTCCGATTATGGC GACTCTTTCAAGGGCGGAGTCTGGCTGCATTCGTTTCTAAACTCATTTGACTATCATCGTCAGCACGCTCCAGTG GGAGGTACTATCAAAGTCATCGACACTATTGATGGTGCGGCTTACCTAGACGTTGAATACCAGCCTGATAGTCGC TCTTTGATGCCAAAACGCCCTATGCGTCCTGTATACTCGTCGGGGCCTGTTTTCCGTGGAGCGGAGGCGACAGAT AAAGAAGGGTATCAATTCCTGCAAGCACGGGGGATTATCATTATAGAGAACGACAAGATTGGTACGGTTGCTGTT CTACCGATTGGCATGGCGCAAGTCTCGTCTGTGGTGGTCAGGGATGACCTTAAGCCGGGGGCTACCATTAATAAA GGTGATGAAATTTCTCACTTTGAGTTTGGTGGCTCGGATATTGTGGTGATGTTCCAGGGCGGCAAGATAGACCCC CATACTCTCCCGCAGCCATTGTCACGGAAAAGCGAAGAACCTTTGTATGAGCATCACAATTACGGAGAAATGCTC GTAAAGGCCAAATCAAAATCCAAGTCCTAA |
| Transcript | >Ani_SJS72_1|g3958.t1 ATGTTCAGTATAATCAATTTGCCTAGTCGCTCATCCGGCGCAGTGTCCAGCACTTCGAGCTCCAAAATGCGTTAC GCACCCATCGTTAACGAGCTTCTCCAGTTACTCGACAAGTCATTTCCTTATGCTTCAGGAATGGAGGCCCTTGAA CAAGCTATCCAATCTGCGCTTCAGTACAGGATTGTTGAGATGGAAAGCTACGGACTCACCTCTGCCAAAGGGTTT CTAAACTTTGCAACCTGGATGGTTGACGGCTGGATACCCACCGAGTCAGCAAAGGGCAGAGACATCTACTATATT TTGTGCATCTTCTATTTCGTGTTTGACCAGGTTCCACTCAAGGATTGTCAAACTGCGATTAGGCCCGAATCTGTG GGGCAAGATCTATCTGAGCTCTCCCAATGGATGGTGAAGTTTGCCAAGGAGGTTGGAAGCCACATGGACCGACCA GAGTCGTTGAACGAAGCATCGCTCACTTCCTTCTGGAATGCTCCAAGCTTCCATGTATTCGAGGCGGATGAATCC AAAACCGAAGGGGGGAAGTGGAAGAACTTCAATCAGTTCTTCTGTCGTCATCTCAAAGATGGCGCACGGCCCATC GATGGCGAGGGTGACGACAGCATTGTCATCTTTCCTGCGGATTCAACCTTCTCCGGATACTGGGATATCACTGAT GATTCATTGGTCGAGCTGAAAGGTCTTCCTTGGCATATAGGCGATCTCCTTGGGCCGTACAAGTCCGATTATGGC GACTCTTTCAAGGGCGGAGTCTGGCTGCATTCGTTTCTAAACTCATTTGACTATCATCGTCAGCACGCTCCAGTG GGAGGTACTATCAAAGTCATCGACACTATTGATGGTGCGGCTTACCTAGACGTTGAATACCAGCCTGATAGTCGC TCTTTGATGCCAAAACGCCCTATGCGTCCTGTATACTCGTCGGGGCCTGTTTTCCGTGGAGCGGAGGCGACAGAT AAAGAAGGGTATCAATTCCTGCAAGCACGGGGGATTATCATTATAGAGAACGACAAGATTGGTACGGTTGCTGTT CTACCGATTGGCATGGCGCAAGTCTCGTCTGTGGTGGTCAGGGATGACCTTAAGCCGGGGGCTACCATTAATAAA GGTGATGAAATTTCTCACTTTGAGTTTGGTGGCTCGGATATTGTGGTGATGTTCCAGGGCGGCAAGATAGACCCC CATACTCTCCCGCAGCCATTGTCACGGAAAAGCGAAGAACCTTTGTATGAGCATCACAATTACGGAGAAATGCTC GTAAAGGCCAAATCAAAATCCAAGTCCTAA |
| Gene | >Ani_SJS72_1|g3958.t1 ATGTTCAGTATAATCAATTTGCCTAGTCGCTCATCCGGCGCAGTGTCCAGCACTTCGAGCTCCAAAATGCGTTAC GCACCCATCGTTAACGAGCTTCTCCAGTTACTCGACAAGTCATTTCCTTATGCTTCAGGAATGGAGGCCCTTGAA CAAGCTATCCAATCTGCGCTTCAGTACAGGATTGTTGAGATGGAAAGCTACGGACTCACCTCTGCCAAAGGGTTT CTAAACTTTGCAACCTGGATGGTTGACGGCTGGATACCCACCGAGTCAGCAAAGGGCAGAGACATCTACTATATT TTGTGCATCTTCTATTTCGTGTTTGACCAGGTTCCACTCAAGGATTGTCAAACTGCGATTAGGCCCGAATCTGTG GGGCAAGATCTATCTGAGCTCTCCCAATGGATGGTGAAGTTTGCCAAGGAGGTTGGAAGCCACATGGACCGACCA GAGTCGTTGAACGAAGCATCGCTCACTTCCTTCTGGAATGCTCCAAGCTTCCATGTATTCGAGGCGGATGAATCC AAAACCGAAGGGGGGAAGTGGAAGAACTTCAATCAGTTCTTCTGTCGTCATCTCAAAGATGGCGCACGGCCCATC GATGGCGAGGGTGACGACAGCATTGTCATCTTTCCTGCGGATTCAACCTTCTCCGGATACTGGGATATCACTGAT GATTCATTGGTCGAGCTGAAAGGTCTTCCTTGGCATATAGGCGATCTCCTTGGGCCGTACAAGTCCGATTATGGC GACTCTTTCAAGGGCGGAGTCTGGCTGCATTCGTTTCTAAACTCATTTGACTATCATCGTCAGCACGCTCCAGTG GGAGGTACTATCAAAGTCATCGACACTATTGATGGTGCGGCTTACCTAGACGTTGAATACCAGCCTGATAGTCGC TCTTTGATGCCAAAACGCCCTATGCGTCCTGTATACTCGTCGGGGCCTGTTTTCCGTGGAGCGGAGGCGACAGAT AAAGAAGGGTATCAATTCCTGCAAGCACGGGGGATTATCATTATAGAGAACGACAAGATTGGTACGGTTGCTGTT CTACCGATTGGCATGGCGCAAGTCTCGTCTGTGGTGGTCAGGGATGACCTTAAGCCGGGGGCTACCATTAATAAA GGTGATGAAATTTCTCACTTTGAGTTTGGTGGCTCGGATATTGTGGTGATGTTCCAGGGCGGCAAGATAGACCCC CATACTCTCCCGCAGCCATTGTCACGGAAAAGCGAAGAACCTTTGTATGAGCATCACAATTACGGAGAAATGCTC GTAAAGGCCAAATCAAAATCCAAGTCCTAA |