© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g3957.t1 |
| Gene name | |
| Location | scaffold_023:163540..165937 |
| Strand | - |
| Gene length (bp) | 2397 |
| Transcript length (bp) | 2397 |
| Coding sequence length (bp) | 2397 |
| Protein length (aa) | 799 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06738 | ThrE | Putative threonine/serine exporter | 3.6E-66 | 353 | 604 |
| PF06738 | ThrE | Putative threonine/serine exporter | 1.3E-06 | 635 | 717 |
| PF12821 | ThrE_2 | Threonine/Serine exporter, ThrE | 4.8E-09 | 634 | 783 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 49 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 461 | 479 | 18 |
| 2 | 508 | 530 | 22 |
| 3 | 550 | 572 | 22 |
| 4 | 585 | 607 | 22 |
| 5 | 627 | 646 | 19 |
| 6 | 699 | 721 | 22 |
| 7 | 767 | 789 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g3957.t1 MSEGRRSNESSSSSLISYHSVERPNADSDAEKRHDLTPDSDSSPSGPRTHRVHFGADRRFEYGDWDTDERVLSPG TSRLRRRSSTQASVDITDSSHRGPPSTSTNGRDEENEKKQQHTTTTEKRSRRERLKAFKDSIKEKAANLAARLGR PDDINEDDLQPIDHRRRNTEPDLYLREEDQNQTCSTEAHRIVRELAHEASGRRPSARRDSALHRAAGVSAQDDDS GNEAIPRRSSGSGGVLSQLLRLSGGWDQFQKGARGLHLASDTFYPFGGSTPGTTTPRKEKVRWYKKHGNVSASTL VGGGSASGASTPVTGELLSAASRRRDKSRRHSMRLEEEIQVTLQIAEIIARQRYIMQLCKALMRFGAPTHRLEEY MRMTARVLDVDSQFLYVPGCMIMSFDDSSTRTTEVKLVRVVQGVDLGRLADTHNVYKNVIHDMIGIEEAGNELEE LMAKKPRFNRYFIVLIYGLATAMVGPFAFDARPIDMPIIFFNGCLLGCMQHILAPRSVLYSNVFEVTAAVLTSFL ARAFGSIRSSAFTNGSNDYIFCFSAIAQSSIALILPGYTVLCSSLELQSQQIVAGSIRMVYAIIYSLFLGYGVTV GTTIYGLIDKNATSNLSCPTSGGFGNAYAQRFPFVAAFSLCLLIVNQGKWKQSPIMIAISVAGYVTNYFVSSRLG NNSQVANTVGAFTVGVMGNLYSRLWHGHAAAAILPAIFVLVPSGLAATGNLITGVDTADEIRSNVTKNATGSGTT SSSSSSNMSTNILGFGMIQVAIGITVGLFVAALVVYPLGKRRSGLFSF* |
| Coding | >Ani_SJS72_1|g3957.t1 ATGTCCGAAGGAAGGCGCAGCAACGAATCAAGCTCAAGCTCCTTGATCAGTTATCACAGTGTCGAGAGACCGAAT GCAGACTCCGACGCTGAAAAAAGACATGATCTCACCCCCGACAGCGACTCATCACCAAGCGGTCCTCGTACTCAT CGAGTTCACTTCGGGGCGGATCGCAGGTTTGAATATGGGGACTGGGATACAGATGAACGAGTTCTCTCTCCCGGT ACATCTCGCCTTCGACGCCGTTCGTCTACTCAAGCGTCAGTAGACATCACCGATTCATCCCACAGAGGTCCACCA TCTACTAGTACAAATGGCAGGGACGAAGAAAATGAGAAAAAGCAGCAACACACGACGACGACTGAGAAAAGATCC AGACGTGAACGCCTGAAAGCATTCAAAGATTCGATCAAAGAGAAAGCAGCGAACCTTGCTGCTCGTCTCGGTCGT CCAGATGATATCAACGAAGACGACCTACAGCCCATCGACCATCGACGTCGCAACACTGAACCTGATCTGTATCTC AGAGAAGAAGATCAAAACCAAACCTGTAGTACCGAGGCGCATCGGATCGTTCGTGAACTAGCACATGAAGCATCC GGCCGTCGTCCGAGTGCCCGTAGGGACTCGGCTTTGCATCGTGCTGCTGGGGTTTCTGCCCAAGATGATGATTCT GGAAATGAAGCGATACCTCGCCGAAGTTCTGGATCGGGAGGCGTTCTATCTCAACTGCTCAGACTTAGCGGGGGC TGGGACCAATTCCAGAAAGGAGCGCGCGGGCTCCACCTAGCCAGTGACACGTTCTACCCTTTCGGTGGAAGCACC CCAGGCACCACGACTCCGCGAAAGGAGAAAGTACGATGGTACAAGAAGCATGGTAACGTTTCAGCATCAACCTTA GTCGGAGGTGGCAGTGCTAGCGGTGCAAGCACCCCTGTTACCGGTGAACTTTTAAGCGCTGCATCCAGACGACGT GACAAGAGCCGAAGGCATAGCATGAGACTCGAGGAGGAGATTCAGGTTACCTTACAGATTGCCGAGATCATTGCT CGACAGAGGTATATCATGCAACTGTGCAAGGCATTAATGAGATTTGGGGCTCCAACTCATCGCTTAGAGGAGTAC ATGCGCATGACAGCCAGAGTTCTGGACGTTGACAGCCAGTTTCTCTATGTGCCCGGATGCATGATCATGTCTTTC GATGACTCCAGCACCCGGACCACCGAAGTCAAACTAGTCCGCGTCGTTCAAGGCGTTGATCTGGGACGATTGGCA GATACCCACAACGTATACAAGAACGTCATACACGACATGATAGGGATCGAAGAAGCCGGAAACGAATTGGAAGAG CTAATGGCAAAGAAGCCCCGCTTCAACCGATACTTCATCGTTTTAATCTACGGCCTAGCCACTGCGATGGTAGGC CCATTCGCATTCGACGCACGACCAATCGACATGCCAATAATCTTCTTCAACGGCTGTCTCCTAGGCTGCATGCAG CACATCCTCGCACCACGATCAGTCCTATACTCCAATGTATTCGAAGTGACCGCCGCCGTTCTCACTTCCTTCCTC GCCCGCGCCTTCGGCAGTATCCGATCATCCGCATTCACCAACGGATCCAACGACTACATATTCTGCTTCTCCGCA ATCGCCCAGTCCTCCATCGCACTAATCCTCCCCGGCTACACCGTCCTCTGCAGCAGCCTGGAACTCCAATCCCAA CAAATCGTTGCCGGTTCCATCCGCATGGTCTACGCCATCATATACTCCCTCTTCCTCGGCTACGGCGTCACAGTC GGCACGACCATCTACGGGCTCATCGACAAGAACGCAACCTCAAACCTAAGCTGCCCGACAAGCGGAGGCTTCGGC AACGCCTACGCACAACGTTTCCCCTTCGTCGCCGCCTTCTCCCTCTGCCTCTTAATCGTCAACCAAGGCAAATGG AAACAATCGCCCATCATGATCGCCATCTCCGTAGCCGGCTACGTTACCAACTACTTCGTCAGCTCGCGTCTAGGC AACAACTCCCAAGTAGCCAACACCGTCGGGGCCTTCACTGTGGGAGTCATGGGCAACCTCTACAGTCGACTCTGG CACGGACACGCTGCAGCAGCTATCTTACCCGCGATATTCGTCCTCGTGCCCTCCGGTCTAGCTGCAACAGGAAAC CTTATCACAGGCGTCGACACAGCCGATGAGATCAGATCAAATGTCACGAAAAATGCAACGGGAAGTGGGACCACG TCTAGCTCGTCATCGAGCAACATGTCAACGAATATTCTGGGGTTTGGAATGATCCAAGTTGCCATTGGGATTACT GTTGGGTTGTTTGTCGCTGCCTTGGTTGTTTATCCTCTTGGAAAGCGGAGAAGCGGACTTTTCAGCTTCTAA |
| Transcript | >Ani_SJS72_1|g3957.t1 ATGTCCGAAGGAAGGCGCAGCAACGAATCAAGCTCAAGCTCCTTGATCAGTTATCACAGTGTCGAGAGACCGAAT GCAGACTCCGACGCTGAAAAAAGACATGATCTCACCCCCGACAGCGACTCATCACCAAGCGGTCCTCGTACTCAT CGAGTTCACTTCGGGGCGGATCGCAGGTTTGAATATGGGGACTGGGATACAGATGAACGAGTTCTCTCTCCCGGT ACATCTCGCCTTCGACGCCGTTCGTCTACTCAAGCGTCAGTAGACATCACCGATTCATCCCACAGAGGTCCACCA TCTACTAGTACAAATGGCAGGGACGAAGAAAATGAGAAAAAGCAGCAACACACGACGACGACTGAGAAAAGATCC AGACGTGAACGCCTGAAAGCATTCAAAGATTCGATCAAAGAGAAAGCAGCGAACCTTGCTGCTCGTCTCGGTCGT CCAGATGATATCAACGAAGACGACCTACAGCCCATCGACCATCGACGTCGCAACACTGAACCTGATCTGTATCTC AGAGAAGAAGATCAAAACCAAACCTGTAGTACCGAGGCGCATCGGATCGTTCGTGAACTAGCACATGAAGCATCC GGCCGTCGTCCGAGTGCCCGTAGGGACTCGGCTTTGCATCGTGCTGCTGGGGTTTCTGCCCAAGATGATGATTCT GGAAATGAAGCGATACCTCGCCGAAGTTCTGGATCGGGAGGCGTTCTATCTCAACTGCTCAGACTTAGCGGGGGC TGGGACCAATTCCAGAAAGGAGCGCGCGGGCTCCACCTAGCCAGTGACACGTTCTACCCTTTCGGTGGAAGCACC CCAGGCACCACGACTCCGCGAAAGGAGAAAGTACGATGGTACAAGAAGCATGGTAACGTTTCAGCATCAACCTTA GTCGGAGGTGGCAGTGCTAGCGGTGCAAGCACCCCTGTTACCGGTGAACTTTTAAGCGCTGCATCCAGACGACGT GACAAGAGCCGAAGGCATAGCATGAGACTCGAGGAGGAGATTCAGGTTACCTTACAGATTGCCGAGATCATTGCT CGACAGAGGTATATCATGCAACTGTGCAAGGCATTAATGAGATTTGGGGCTCCAACTCATCGCTTAGAGGAGTAC ATGCGCATGACAGCCAGAGTTCTGGACGTTGACAGCCAGTTTCTCTATGTGCCCGGATGCATGATCATGTCTTTC GATGACTCCAGCACCCGGACCACCGAAGTCAAACTAGTCCGCGTCGTTCAAGGCGTTGATCTGGGACGATTGGCA GATACCCACAACGTATACAAGAACGTCATACACGACATGATAGGGATCGAAGAAGCCGGAAACGAATTGGAAGAG CTAATGGCAAAGAAGCCCCGCTTCAACCGATACTTCATCGTTTTAATCTACGGCCTAGCCACTGCGATGGTAGGC CCATTCGCATTCGACGCACGACCAATCGACATGCCAATAATCTTCTTCAACGGCTGTCTCCTAGGCTGCATGCAG CACATCCTCGCACCACGATCAGTCCTATACTCCAATGTATTCGAAGTGACCGCCGCCGTTCTCACTTCCTTCCTC GCCCGCGCCTTCGGCAGTATCCGATCATCCGCATTCACCAACGGATCCAACGACTACATATTCTGCTTCTCCGCA ATCGCCCAGTCCTCCATCGCACTAATCCTCCCCGGCTACACCGTCCTCTGCAGCAGCCTGGAACTCCAATCCCAA CAAATCGTTGCCGGTTCCATCCGCATGGTCTACGCCATCATATACTCCCTCTTCCTCGGCTACGGCGTCACAGTC GGCACGACCATCTACGGGCTCATCGACAAGAACGCAACCTCAAACCTAAGCTGCCCGACAAGCGGAGGCTTCGGC AACGCCTACGCACAACGTTTCCCCTTCGTCGCCGCCTTCTCCCTCTGCCTCTTAATCGTCAACCAAGGCAAATGG AAACAATCGCCCATCATGATCGCCATCTCCGTAGCCGGCTACGTTACCAACTACTTCGTCAGCTCGCGTCTAGGC AACAACTCCCAAGTAGCCAACACCGTCGGGGCCTTCACTGTGGGAGTCATGGGCAACCTCTACAGTCGACTCTGG CACGGACACGCTGCAGCAGCTATCTTACCCGCGATATTCGTCCTCGTGCCCTCCGGTCTAGCTGCAACAGGAAAC CTTATCACAGGCGTCGACACAGCCGATGAGATCAGATCAAATGTCACGAAAAATGCAACGGGAAGTGGGACCACG TCTAGCTCGTCATCGAGCAACATGTCAACGAATATTCTGGGGTTTGGAATGATCCAAGTTGCCATTGGGATTACT GTTGGGTTGTTTGTCGCTGCCTTGGTTGTTTATCCTCTTGGAAAGCGGAGAAGCGGACTTTTCAGCTTCTAA |
| Gene | >Ani_SJS72_1|g3957.t1 ATGTCCGAAGGAAGGCGCAGCAACGAATCAAGCTCAAGCTCCTTGATCAGTTATCACAGTGTCGAGAGACCGAAT GCAGACTCCGACGCTGAAAAAAGACATGATCTCACCCCCGACAGCGACTCATCACCAAGCGGTCCTCGTACTCAT CGAGTTCACTTCGGGGCGGATCGCAGGTTTGAATATGGGGACTGGGATACAGATGAACGAGTTCTCTCTCCCGGT ACATCTCGCCTTCGACGCCGTTCGTCTACTCAAGCGTCAGTAGACATCACCGATTCATCCCACAGAGGTCCACCA TCTACTAGTACAAATGGCAGGGACGAAGAAAATGAGAAAAAGCAGCAACACACGACGACGACTGAGAAAAGATCC AGACGTGAACGCCTGAAAGCATTCAAAGATTCGATCAAAGAGAAAGCAGCGAACCTTGCTGCTCGTCTCGGTCGT CCAGATGATATCAACGAAGACGACCTACAGCCCATCGACCATCGACGTCGCAACACTGAACCTGATCTGTATCTC AGAGAAGAAGATCAAAACCAAACCTGTAGTACCGAGGCGCATCGGATCGTTCGTGAACTAGCACATGAAGCATCC GGCCGTCGTCCGAGTGCCCGTAGGGACTCGGCTTTGCATCGTGCTGCTGGGGTTTCTGCCCAAGATGATGATTCT GGAAATGAAGCGATACCTCGCCGAAGTTCTGGATCGGGAGGCGTTCTATCTCAACTGCTCAGACTTAGCGGGGGC TGGGACCAATTCCAGAAAGGAGCGCGCGGGCTCCACCTAGCCAGTGACACGTTCTACCCTTTCGGTGGAAGCACC CCAGGCACCACGACTCCGCGAAAGGAGAAAGTACGATGGTACAAGAAGCATGGTAACGTTTCAGCATCAACCTTA GTCGGAGGTGGCAGTGCTAGCGGTGCAAGCACCCCTGTTACCGGTGAACTTTTAAGCGCTGCATCCAGACGACGT GACAAGAGCCGAAGGCATAGCATGAGACTCGAGGAGGAGATTCAGGTTACCTTACAGATTGCCGAGATCATTGCT CGACAGAGGTATATCATGCAACTGTGCAAGGCATTAATGAGATTTGGGGCTCCAACTCATCGCTTAGAGGAGTAC ATGCGCATGACAGCCAGAGTTCTGGACGTTGACAGCCAGTTTCTCTATGTGCCCGGATGCATGATCATGTCTTTC GATGACTCCAGCACCCGGACCACCGAAGTCAAACTAGTCCGCGTCGTTCAAGGCGTTGATCTGGGACGATTGGCA GATACCCACAACGTATACAAGAACGTCATACACGACATGATAGGGATCGAAGAAGCCGGAAACGAATTGGAAGAG CTAATGGCAAAGAAGCCCCGCTTCAACCGATACTTCATCGTTTTAATCTACGGCCTAGCCACTGCGATGGTAGGC CCATTCGCATTCGACGCACGACCAATCGACATGCCAATAATCTTCTTCAACGGCTGTCTCCTAGGCTGCATGCAG CACATCCTCGCACCACGATCAGTCCTATACTCCAATGTATTCGAAGTGACCGCCGCCGTTCTCACTTCCTTCCTC GCCCGCGCCTTCGGCAGTATCCGATCATCCGCATTCACCAACGGATCCAACGACTACATATTCTGCTTCTCCGCA ATCGCCCAGTCCTCCATCGCACTAATCCTCCCCGGCTACACCGTCCTCTGCAGCAGCCTGGAACTCCAATCCCAA CAAATCGTTGCCGGTTCCATCCGCATGGTCTACGCCATCATATACTCCCTCTTCCTCGGCTACGGCGTCACAGTC GGCACGACCATCTACGGGCTCATCGACAAGAACGCAACCTCAAACCTAAGCTGCCCGACAAGCGGAGGCTTCGGC AACGCCTACGCACAACGTTTCCCCTTCGTCGCCGCCTTCTCCCTCTGCCTCTTAATCGTCAACCAAGGCAAATGG AAACAATCGCCCATCATGATCGCCATCTCCGTAGCCGGCTACGTTACCAACTACTTCGTCAGCTCGCGTCTAGGC AACAACTCCCAAGTAGCCAACACCGTCGGGGCCTTCACTGTGGGAGTCATGGGCAACCTCTACAGTCGACTCTGG CACGGACACGCTGCAGCAGCTATCTTACCCGCGATATTCGTCCTCGTGCCCTCCGGTCTAGCTGCAACAGGAAAC CTTATCACAGGCGTCGACACAGCCGATGAGATCAGATCAAATGTCACGAAAAATGCAACGGGAAGTGGGACCACG TCTAGCTCGTCATCGAGCAACATGTCAACGAATATTCTGGGGTTTGGAATGATCCAAGTTGCCATTGGGATTACT GTTGGGTTGTTTGTCGCTGCCTTGGTTGTTTATCCTCTTGGAAAGCGGAGAAGCGGACTTTTCAGCTTCTAA |