Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g3954.t1
Gene name
Location	scaffold_023:145588..146756
Strand	-
Gene length (bp)	1168
Transcript length (bp)	1074
Coding sequence length (bp)	1074
Protein length (aa)	358

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00107	ADH_zinc_N	Zinc-binding dehydrogenase	2.2E-11	170	246
PF08240	ADH_N	Alcohol dehydrogenase GroES-like domain	3.9E-06	33	88

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g3954.t1 MVGISQGQLAVVTQGPRKAALVTNRSIPRLRDDYILVRTVTVALNPTDWRHIDFVPSNGCIVGCDFAGIVEEIGP KVTKYQKGDRVLGLTHGCNAVEPEDGAFAQYIMVKGNGQLKIPDGMSWEDACTVGVGYTTVGQSLYQNLGLPVPG KPRSPTTPKTVLIHGGSTATGTLAIQCAKLSGMEVITTCSASNFELVKGLGADAVFDYTKPNAAAAIRKYTRDNL KLCFDTVAMASSAQFCAEALTSRSGARYHTLQELRCPRRDVRSTVSMAYTVVGEPYTMGPQKVPAKPIDMKHHLL WQSVFQDLLDQGKIKTHPVSKQPYGLKGVLSGLDLLRENKVRGQKLVYRVDETPHQF*
Coding	>Ani_SJS72_1\|g3954.t1 ATGGTTGGAATATCACAGGGCCAATTGGCTGTTGTCACACAAGGTCCTCGCAAGGCTGCTTTGGTGACCAATCGA TCAATCCCTAGGCTACGCGACGATTACATCTTGGTCAGAACTGTAACAGTGGCCCTTAACCCAACCGACTGGAGG CATATTGACTTCGTCCCAAGCAATGGATGTATCGTGGGTTGCGACTTTGCCGGGATTGTCGAGGAGATTGGTCCC AAGGTGACCAAATACCAGAAGGGAGATCGAGTTTTGGGACTCACACACGGATGCAACGCTGTTGAGCCCGAAGAT GGCGCGTTTGCCCAATACATTATGGTCAAGGGAAATGGGCAACTCAAGATCCCGGACGGGATGAGCTGGGAGGAT GCGTGCACGGTTGGAGTCGGATACACAACCGTGGGCCAGAGTCTGTATCAAAATCTTGGACTCCCAGTGCCTGGA AAGCCACGAAGTCCTACGACACCAAAGACTGTCTTGATCCATGGAGGATCTACCGCAACTGGCACACTGGCCATT CAATGCGCTAAACTGTCTGGGATGGAAGTAATCACGACGTGCTCAGCCAGCAATTTCGAGCTGGTCAAAGGACTC GGGGCGGACGCCGTGTTTGACTATACCAAGCCCAATGCGGCGGCAGCGATTCGGAAGTATACTAGGGATAACTTG AAGCTGTGCTTTGACACCGTTGCAATGGCGAGCTCTGCCCAGTTCTGTGCGGAAGCTCTAACCAGCAGATCTGGG GCCCGATACCACACGTTGCAGGAACTTCGGTGCCCTCGGCGAGATGTTCGGTCGACGGTCTCAATGGCGTATACC GTCGTGGGGGAGCCATACACAATGGGTCCCCAGAAGGTTCCCGCCAAGCCCATCGATATGAAGCATCATCTATTA TGGCAGTCTGTCTTTCAGGACTTGTTGGATCAGGGTAAGATAAAGACCCACCCTGTGTCTAAGCAGCCATATGGG CTCAAGGGAGTGTTGTCCGGGCTGGATCTGTTGCGCGAGAATAAAGTACGAGGACAGAAGTTGGTTTACCGGGTG GATGAGACACCGCATCAGTTCTAG
Transcript	>Ani_SJS72_1\|g3954.t1 ATGGTTGGAATATCACAGGGCCAATTGGCTGTTGTCACACAAGGTCCTCGCAAGGCTGCTTTGGTGACCAATCGA TCAATCCCTAGGCTACGCGACGATTACATCTTGGTCAGAACTGTAACAGTGGCCCTTAACCCAACCGACTGGAGG CATATTGACTTCGTCCCAAGCAATGGATGTATCGTGGGTTGCGACTTTGCCGGGATTGTCGAGGAGATTGGTCCC AAGGTGACCAAATACCAGAAGGGAGATCGAGTTTTGGGACTCACACACGGATGCAACGCTGTTGAGCCCGAAGAT GGCGCGTTTGCCCAATACATTATGGTCAAGGGAAATGGGCAACTCAAGATCCCGGACGGGATGAGCTGGGAGGAT GCGTGCACGGTTGGAGTCGGATACACAACCGTGGGCCAGAGTCTGTATCAAAATCTTGGACTCCCAGTGCCTGGA AAGCCACGAAGTCCTACGACACCAAAGACTGTCTTGATCCATGGAGGATCTACCGCAACTGGCACACTGGCCATT CAATGCGCTAAACTGTCTGGGATGGAAGTAATCACGACGTGCTCAGCCAGCAATTTCGAGCTGGTCAAAGGACTC GGGGCGGACGCCGTGTTTGACTATACCAAGCCCAATGCGGCGGCAGCGATTCGGAAGTATACTAGGGATAACTTG AAGCTGTGCTTTGACACCGTTGCAATGGCGAGCTCTGCCCAGTTCTGTGCGGAAGCTCTAACCAGCAGATCTGGG GCCCGATACCACACGTTGCAGGAACTTCGGTGCCCTCGGCGAGATGTTCGGTCGACGGTCTCAATGGCGTATACC GTCGTGGGGGAGCCATACACAATGGGTCCCCAGAAGGTTCCCGCCAAGCCCATCGATATGAAGCATCATCTATTA TGGCAGTCTGTCTTTCAGGACTTGTTGGATCAGGGTAAGATAAAGACCCACCCTGTGTCTAAGCAGCCATATGGG CTCAAGGGAGTGTTGTCCGGGCTGGATCTGTTGCGCGAGAATAAAGTACGAGGACAGAAGTTGGTTTACCGGGTG GATGAGACACCGCATCAGTTCTAG
Gene	>Ani_SJS72_1\|g3954.t1 ATGGTTGGAATATCACAGGGCCAATTGGCTGTTGTCACACAAGGTCCTCGCAAGGCTGCTTTGGTGACCAATCGA TCAATCCCTAGGCTACGCGACGATTACATCTTGGTCAGAACTGTAACAGGTAGGCAGGCATATTGGGCCATTGTT TTGTTGCTCAATTACCATTCCGCTTTCATTCCATTTAGCAAGAAGCACTCACTAAAAACATGGCACAGTGGCCCT TAACCCAACCGACTGGAGGCATATTGACTTCGTCCCAAGCAATGGATGTATCGTGGGTTGCGACTTTGCCGGGAT TGTCGAGGAGATTGGTCCCAAGGTGACCAAATACCAGAAGGGAGATCGAGTTTTGGGACTCACACACGGATGCAA CGCTGTTGAGCCCGAAGATGGCGCGTTTGCCCAATACATTATGGTCAAGGGAAATGGGCAACTCAAGATCCCGGA CGGGATGAGCTGGGAGGATGCGTGCACGGTTGGAGTCGGATACACAACCGTGGGCCAGAGTCTGTATCAAAATCT TGGACTCCCAGTGCCTGGAAAGCCACGAAGTCCTACGACACCAAAGACTGTCTTGATCCATGGAGGATCTACCGC AACTGGCACACTGGCCATTCAATGCGCTAAACTGTCTGGGATGGAAGTAATCACGACGTGCTCAGCCAGCAATTT CGAGCTGGTCAAAGGACTCGGGGCGGACGCCGTGTTTGACTATACCAAGCCCAATGCGGCGGCAGCGATTCGGAA GTATACTAGGGATAACTTGAAGCTGTGCTTTGACACCGTTGCAATGGCGAGCTCTGCCCAGTTCTGTGCGGAAGC TCTAACCAGCAGATCTGGGGCCCGATACCACACGTTGCAGGAACTTCGGTGCCCTCGGCGAGATGTTCGGTCGAC GGTCTCAATGGCGTATACCGTCGTGGGGGAGCCATACACAATGGGTCCCCAGAAGGTTCCCGCCAAGCCCATCGA TATGAAGCATCATCTATTATGGCAGTCTGTCTTTCAGGACTTGTTGGATCAGGGTAAGATAAAGACCCACCCTGT GTCTAAGCAGCCATATGGGCTCAAGGGAGTGTTGTCCGGGCTGGATCTGTTGCGCGAGAATAAAGTACGAGGACA GAAGTTGGTTTACCGGGTGGATGAGACACCGCATCAGTTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail