© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g3949.t1 |
| Gene name | |
| Location | scaffold_023:128727..131473 |
| Strand | + |
| Gene length (bp) | 2746 |
| Transcript length (bp) | 2169 |
| Coding sequence length (bp) | 2169 |
| Protein length (aa) | 723 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01699 | Na_Ca_ex | Sodium/calcium exchanger protein | 1.8E-19 | 110 | 264 |
| PF01699 | Na_Ca_ex | Sodium/calcium exchanger protein | 4.8E-18 | 563 | 703 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 83 | 105 | 22 |
| 2 | 110 | 129 | 19 |
| 3 | 141 | 163 | 22 |
| 4 | 178 | 197 | 19 |
| 5 | 210 | 232 | 22 |
| 6 | 247 | 264 | 17 |
| 7 | 563 | 585 | 22 |
| 8 | 598 | 620 | 22 |
| 9 | 627 | 649 | 22 |
| 10 | 659 | 681 | 22 |
| 11 | 688 | 710 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g3949.t1 MHRIHSWAKAHASTPNTQSQGQNQSNSQSSEDASAQDAQVKEGIRDPASPESEKDANQTPERGLFVRMKDGIVRF TGHTKRALCHSWVNVLLVFVPVGIAVEAAGLNPGLIFAMNAIAIIPLAGLLSHATECVASRLGDTVGALINVTFG NAVELIIFIIALVKNEIRIVQASLLGSILANLLLILGMAFLLGGLRFQEQIYNSTVTQMSACLLSLSVMSLLLPT AFHASWSDSGDADKYTLKVSRGTSVVLLLVYVLYIIFQLKSHAYLYASIPQQIIDEESHPGVLAEFMNSSSDSSS SSDESVDTTTSWSTAKRIKRAMKHRRHRKSSTSSHGTVSPQSFRKKSSADMPPAAVIDEHAGSAGDLSVTQADGS GSFVIDFGDDSRYDADHEPQTRDFGQEQDKASKEDRKTKRRERRKQRRAEKDKAAASVTGTTVTGRPSMKTHKTE PTLDHPQPTLEVGEATEPAKRRSPFRPTIPSLLSNTVFSSNLAAPNSTVPASPSNPYGLRRTHSLPSFTNRPPPP GNAVQFARGASRMPTAVTNNPTEAAPEQPEPEMSRTAAVVMLLVSTGLVAVCAEFLVDAIPTMIESSSVSEAFIG LIILPIVGNAAEHVTAVSVATKNKMDLAIGVSVGSSIQIAIFVTPLVVILGWCMDKDMSLYFTLFETICLFVTAF VVNFLVLDGRSNYLEGSLLIAAYVIIGVAAFYYPGSGQSSDLGTAGG* |
| Coding | >Ani_SJS72_1|g3949.t1 ATGCACCGGATTCACTCGTGGGCGAAAGCTCACGCGTCTACCCCGAATACTCAGTCCCAGGGTCAAAATCAGTCC AACTCCCAGTCCTCTGAGGACGCTTCAGCTCAAGATGCTCAAGTGAAAGAAGGTATACGTGACCCGGCCAGCCCG GAGTCGGAAAAAGATGCCAATCAAACCCCTGAGCGCGGACTGTTCGTTCGGATGAAGGATGGAATTGTTCGCTTC ACCGGCCACACCAAACGCGCCCTGTGCCACAGCTGGGTCAATGTGCTGCTTGTGTTCGTCCCTGTCGGCATTGCG GTCGAGGCCGCTGGACTCAATCCAGGCCTGATCTTTGCCATGAATGCGATAGCTATCATCCCCTTGGCCGGTCTG CTCAGCCACGCCACCGAGTGTGTCGCCAGTCGATTGGGTGACACCGTGGGTGCGCTCATTAACGTCACCTTCGGA AATGCAGTAGAGTTGATCATCTTCATTATTGCTCTAGTCAAGAATGAGATTCGGATCGTTCAAGCATCCCTGCTC GGCTCCATCTTAGCAAACCTACTGCTGATCCTGGGTATGGCCTTTCTGTTGGGAGGCCTGCGCTTTCAGGAACAG ATCTATAATAGCACTGTCACGCAGATGAGTGCATGTCTTCTCAGTTTGAGTGTCATGAGTTTGCTCTTGCCGACG GCGTTCCACGCTTCTTGGTCGGATTCGGGAGATGCAGATAAGTACACACTTAAAGTTAGCCGTGGAACAAGTGTT GTCTTGCTCCTGGTGTACGTCTTGTACATCATCTTCCAGCTCAAATCCCACGCCTATCTTTACGCCAGTATCCCA CAACAAATCATTGATGAAGAATCTCACCCGGGTGTTCTGGCTGAATTCATGAATAGTTCGTCAGACTCGAGCAGC TCATCGGATGAGTCTGTCGATACGACAACCTCCTGGTCTACCGCCAAGCGTATAAAGAGGGCCATGAAACATAGG CGGCATCGCAAATCGAGTACCAGCTCTCACGGTACGGTTTCTCCACAGTCGTTCCGTAAAAAGTCCTCGGCCGAT ATGCCTCCTGCAGCCGTTATAGATGAGCATGCCGGTTCTGCGGGTGATCTGAGTGTTACTCAAGCGGACGGGTCC GGGTCCTTTGTCATTGATTTTGGAGATGACAGCCGATACGATGCCGATCATGAACCCCAGACGCGGGATTTCGGA CAAGAACAGGATAAAGCCTCCAAGGAGGATCGAAAGACGAAGAGGCGTGAGCGGCGAAAGCAACGACGTGCCGAA AAGGACAAGGCCGCCGCATCCGTGACTGGCACTACTGTGACCGGTCGCCCATCCATGAAGACACACAAGACGGAA CCCACCTTGGATCATCCTCAACCTACGTTGGAGGTTGGAGAAGCGACTGAGCCTGCCAAAAGGCGATCGCCCTTC CGTCCAACTATTCCATCTCTGTTGAGCAACACTGTTTTCTCGAGCAACTTGGCCGCGCCCAACTCAACGGTCCCT GCCAGTCCCTCGAATCCTTATGGTCTTCGACGAACGCATTCTCTGCCGTCTTTCACCAACCGCCCTCCACCTCCA GGAAATGCCGTTCAGTTTGCCCGGGGTGCTTCTCGCATGCCCACGGCCGTGACCAACAACCCAACTGAAGCGGCC CCTGAGCAGCCAGAACCCGAAATGTCTCGCACCGCAGCGGTGGTGATGCTTCTGGTTTCGACCGGCCTTGTAGCA GTGTGTGCGGAGTTTCTCGTCGACGCTATCCCCACCATGATCGAGAGCTCGTCTGTCAGTGAAGCGTTCATCGGT CTGATTATCCTCCCGATTGTTGGCAACGCAGCAGAGCACGTGACCGCCGTCAGCGTGGCCACCAAGAACAAGATG GACCTGGCCATCGGTGTCTCGGTAGGAAGTAGTATTCAAATTGCTATCTTTGTTACGCCTTTGGTGGTCATCCTG GGTTGGTGCATGGACAAGGACATGTCCTTGTACTTCACGCTATTTGAGACCATCTGTCTATTTGTCACGGCATTT GTTGTCAACTTCCTGGTTTTGGATGGCCGAAGCAACTACCTGGAAGGCTCCTTGCTCATTGCAGCCTATGTAATC ATAGGTGTTGCTGCATTTTATTATCCTGGCAGTGGACAGTCCAGTGATCTTGGCACTGCTGGAGGATAA |
| Transcript | >Ani_SJS72_1|g3949.t1 ATGCACCGGATTCACTCGTGGGCGAAAGCTCACGCGTCTACCCCGAATACTCAGTCCCAGGGTCAAAATCAGTCC AACTCCCAGTCCTCTGAGGACGCTTCAGCTCAAGATGCTCAAGTGAAAGAAGGTATACGTGACCCGGCCAGCCCG GAGTCGGAAAAAGATGCCAATCAAACCCCTGAGCGCGGACTGTTCGTTCGGATGAAGGATGGAATTGTTCGCTTC ACCGGCCACACCAAACGCGCCCTGTGCCACAGCTGGGTCAATGTGCTGCTTGTGTTCGTCCCTGTCGGCATTGCG GTCGAGGCCGCTGGACTCAATCCAGGCCTGATCTTTGCCATGAATGCGATAGCTATCATCCCCTTGGCCGGTCTG CTCAGCCACGCCACCGAGTGTGTCGCCAGTCGATTGGGTGACACCGTGGGTGCGCTCATTAACGTCACCTTCGGA AATGCAGTAGAGTTGATCATCTTCATTATTGCTCTAGTCAAGAATGAGATTCGGATCGTTCAAGCATCCCTGCTC GGCTCCATCTTAGCAAACCTACTGCTGATCCTGGGTATGGCCTTTCTGTTGGGAGGCCTGCGCTTTCAGGAACAG ATCTATAATAGCACTGTCACGCAGATGAGTGCATGTCTTCTCAGTTTGAGTGTCATGAGTTTGCTCTTGCCGACG GCGTTCCACGCTTCTTGGTCGGATTCGGGAGATGCAGATAAGTACACACTTAAAGTTAGCCGTGGAACAAGTGTT GTCTTGCTCCTGGTGTACGTCTTGTACATCATCTTCCAGCTCAAATCCCACGCCTATCTTTACGCCAGTATCCCA CAACAAATCATTGATGAAGAATCTCACCCGGGTGTTCTGGCTGAATTCATGAATAGTTCGTCAGACTCGAGCAGC TCATCGGATGAGTCTGTCGATACGACAACCTCCTGGTCTACCGCCAAGCGTATAAAGAGGGCCATGAAACATAGG CGGCATCGCAAATCGAGTACCAGCTCTCACGGTACGGTTTCTCCACAGTCGTTCCGTAAAAAGTCCTCGGCCGAT ATGCCTCCTGCAGCCGTTATAGATGAGCATGCCGGTTCTGCGGGTGATCTGAGTGTTACTCAAGCGGACGGGTCC GGGTCCTTTGTCATTGATTTTGGAGATGACAGCCGATACGATGCCGATCATGAACCCCAGACGCGGGATTTCGGA CAAGAACAGGATAAAGCCTCCAAGGAGGATCGAAAGACGAAGAGGCGTGAGCGGCGAAAGCAACGACGTGCCGAA AAGGACAAGGCCGCCGCATCCGTGACTGGCACTACTGTGACCGGTCGCCCATCCATGAAGACACACAAGACGGAA CCCACCTTGGATCATCCTCAACCTACGTTGGAGGTTGGAGAAGCGACTGAGCCTGCCAAAAGGCGATCGCCCTTC CGTCCAACTATTCCATCTCTGTTGAGCAACACTGTTTTCTCGAGCAACTTGGCCGCGCCCAACTCAACGGTCCCT GCCAGTCCCTCGAATCCTTATGGTCTTCGACGAACGCATTCTCTGCCGTCTTTCACCAACCGCCCTCCACCTCCA GGAAATGCCGTTCAGTTTGCCCGGGGTGCTTCTCGCATGCCCACGGCCGTGACCAACAACCCAACTGAAGCGGCC CCTGAGCAGCCAGAACCCGAAATGTCTCGCACCGCAGCGGTGGTGATGCTTCTGGTTTCGACCGGCCTTGTAGCA GTGTGTGCGGAGTTTCTCGTCGACGCTATCCCCACCATGATCGAGAGCTCGTCTGTCAGTGAAGCGTTCATCGGT CTGATTATCCTCCCGATTGTTGGCAACGCAGCAGAGCACGTGACCGCCGTCAGCGTGGCCACCAAGAACAAGATG GACCTGGCCATCGGTGTCTCGGTAGGAAGTAGTATTCAAATTGCTATCTTTGTTACGCCTTTGGTGGTCATCCTG GGTTGGTGCATGGACAAGGACATGTCCTTGTACTTCACGCTATTTGAGACCATCTGTCTATTTGTCACGGCATTT GTTGTCAACTTCCTGGTTTTGGATGGCCGAAGCAACTACCTGGAAGGCTCCTTGCTCATTGCAGCCTATGTAATC ATAGGTGTTGCTGCATTTTATTATCCTGGCAGTGGACAGTCCAGTGATCTTGGCACTGCTGGAGGATAA |
| Gene | >Ani_SJS72_1|g3949.t1 ATGCGTGAGTGCCTCTCCCGACTCCCTCCCTATCGCCATCCCTTCCCTGGCCCATTAGAGGTCCTCCTCAACGAT TCTTTTTGACGTCTCATCGATGATCCCATCTATCTTGAACCCCGTCGTTAACATCTTATCTCCTTGCTATGCAGA CCGGATTCACTCGTGGGCGAAAGCTCACGCGTCTACCCCGAATACTCAGTCCCAGGGTCAAAATCAGTCCAACTC CCAGTCCTCTGAGGACGCTTCAGCTCAAGATGCTCAAGTGAAAGAAGGTATACGTGACCCGGCCAGCCCGGAGTC GGAAAAAGATGCCAATCAAACCCCTGAGCGCGGACTGTTCGTTCGGATGAAGGATGGAATTGTTCGCTTCACCGG CCACACCAAACGCGCCCTGTGCCACAGCTGGGTCAATGTGCTGCTTGTGTTCGTCCCTGTCGGCATTGCGGTCGA GGCCGCTGGACTCAATCCAGGCCTGATCTTTGCCATGAATGCGATAGCTATCATCCCCTTGGCCGGTCTGCTCAG CCACGCCACCGAGTGTGTCGCCAGTCGATTGGGTGACACCGTGGGTGCGCTCATTAACGTCACCTTCGGAAATGC AGTAGAGTTGATCATCTTGTATGTTTTCTGAATCCGTCCTTCTACCTCTGATTGTGTTGCTAACGGTTCGGTAGC ATGTAAGTCGTTGTTCATAAGAACATGTGCATCATCAGATACTAAACACAGCGGATTCGTTCAGTATTGCTCTAG TCAAGGTGAGTAAACAGATTCTCCGACAGACTTGAGGATCGCCCTAATATTGTCTAGAATGAGATTCGGATCGTT CAAGCATCCCTGCTCGGCTCCATCTTAGCAAACCTACTGCTGATCCTGGGTATGGCCTTTCTGTTGGGAGGCCTG CGCTTTCAGGAACAGGTAAGCCAGCCAGGGATCTAGATCTGTACTTGTTCGATGAACTAACTTGTGCCAGATCTA TAATAGCACTGTCACGCAGATGAGTGCATGTCTTCTCAGTTTGAGTGTCATGAGTTTGCTCTTGCCGGTATGTCT GCGTATCCCTTCGGTTTACCCTATACATGCTGACATATCCAGACGGCGTTCCACGCTTCTTGGTCGGATTCGGGA GATGCAGATAAGTACACACTTAAAGTTAGCCGTGGAACAAGTGTTGTAAGTAGTAGCTACTGCCAATCAGGTCAT GCCTTTCTAACTCTTCGATCAGGTCTTGCTCCTGGTGTACGTCTTGTACATCATCTTCCAGCTCAAATCCCACGC CTATCTTTACGCCAGTATCCCACAACAAATCATTGATGAAGAATCTCACCCGGGTGTTCTGGCTGAATTCATGAA TAGTTCGTCAGACTCGAGCAGCTCATCGGATGAGTCTGTCGATACGACAACCTCCTGGTCTACCGCCAAGCGTAT AAAGAGGGCCATGAAACATAGGCGGCATCGCAAATCGAGTACCAGCTCTCACGGTACGGTTTCTCCACAGTCGTT CCGTAAAAAGTCCTCGGCCGATATGCCTCCTGCAGCCGTTATAGATGAGCATGCCGGTTCTGCGGGTGATCTGAG TGTTACTCAAGCGGACGGGTCCGGGTCCTTTGTCATTGATTTTGGAGATGACAGCCGATACGATGCCGATCATGA ACCCCAGACGCGGGATTTCGGACAAGAACAGGATAAAGCCTCCAAGGAGGATCGAAAGACGAAGAGGCGTGAGCG GCGAAAGCAACGACGTGCCGAAAAGGACAAGGCCGCCGCATCCGTGACTGGCACTACTGTGACCGGTCGCCCATC CATGAAGACACACAAGACGGAACCCACCTTGGATCATCCTCAACCTACGTTGGAGGTTGGAGAAGCGACTGAGCC TGCCAAAAGGCGATCGCCCTTCCGTCCAACTATTCCATCTCTGTTGAGCAACACTGTTTTCTCGAGCAACTTGGC CGCGCCCAACTCAACGGTCCCTGCCAGTCCCTCGAATCCTTATGGTCTTCGACGAACGCATTCTCTGCCGTCTTT CACCAACCGCCCTCCACCTCCAGGAAATGCCGTTCAGTTTGCCCGGGGTGCTTCTCGCATGCCCACGGCCGTGAC CAACAACCCAACTGAAGCGGCCCCTGAGCAGCCAGAACCCGAAATGTCTCGCACCGCAGCGGTGGTGATGCTTCT GGTTTCGACCGGCCTTGTAGCAGTGTGTGCGGAGTTTCTCGTCGACGCTATCCCCACCATGATCGAGAGCTCGTC TGTCAGTGAAGCGTTCATCGGTCTGATTATCCTCCCGATTGTTGGCAACGCAGCAGAGCACGTGACCGCCGTCAG CGTGGCCACCAAGAACAAGATGGACCTGGCCATCGGTGTCTCGGTAGGAAGTAGTATTCAAATTGGTATGTTTTT TATTCTTCTGTTGTTTGGGAGTAGAGACTCATTCGTCACAGCTATCTTTGTTACGCCTTTGGTGGTCATCCTGGG TTGGTGCATGGACAAGGACATGTCCTTGTACTTCACGCTATTTGAGACCATCTGTCTATTTGTCACGGCATTTGT TGTCAACTTCCTGGTTTTGGATGGCCGAAGCAACTACCTGGAAGGCTCCTTGCTCATTGCAGCCTATGTAATCAT AGGGTAAGTTCGTTTTCTGTCCAGGTCGCGTTTGTTCGGCAGCTAACGAGCTTCAAGTGTTGCTGCATTTTATTA TCCTGGCAGTGGACAGTCCAGTGATCTTGGCACTGCTGGAGGATAA |