© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g3916.t1 |
| Gene name | |
| Location | scaffold_023:35575..37230 |
| Strand | + |
| Gene length (bp) | 1655 |
| Transcript length (bp) | 1425 |
| Coding sequence length (bp) | 1425 |
| Protein length (aa) | 475 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00909 | Ammonium_transp | Ammonium Transporter Family | 1.3E-109 | 34 | 432 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0072488 | ammonium transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0008519 | ammonium transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0006811 | ion transport | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0022890 | inorganic cation transmembrane transporter activity | No |
| GO:0098662 | inorganic cation transmembrane transport | No |
| GO:0003674 | molecular_function | No |
| GO:0071705 | nitrogen compound transport | No |
| GO:0098655 | cation transmembrane transport | No |
| GO:0006812 | cation transport | No |
| GO:0005215 | transporter activity | No |
| GO:0008324 | cation transmembrane transporter activity | No |
| GO:0051179 | localization | No |
| GO:0034220 | ion transmembrane transport | No |
| GO:0006810 | transport | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0022803 | passive transmembrane transporter activity | No |
| GO:0098660 | inorganic ion transmembrane transport | No |
| GO:0015267 | channel activity | No |
| GO:0005216 | ion channel activity | No |
| GO:0005575 | cellular_component | No |
| GO:0055085 | transmembrane transport | No |
| GO:0009987 | cellular process | No |
| GO:0005261 | cation channel activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 68 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 32 | 54 | 22 |
| 2 | 61 | 83 | 22 |
| 3 | 122 | 144 | 22 |
| 4 | 149 | 171 | 22 |
| 5 | 186 | 208 | 22 |
| 6 | 225 | 242 | 17 |
| 7 | 252 | 274 | 22 |
| 8 | 283 | 302 | 19 |
| 9 | 306 | 328 | 22 |
| 10 | 340 | 359 | 19 |
| 11 | 386 | 408 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g3916.t1 MTEPVYNSSTPEGGDPTQVDVNAQYTGFEYNYVYITTCTFIVFLILPGIGMLYSGLSRRKSALALLFQAFMVLAV STFQWLFWGYSLTYSRDGGPFIGTLKNFGLMDVLVAPSPGSAVLPDVVFCLFQLLFCACTVMIVVGGAFERGGIV PSLIFSFFWATIVYCPLARWTWSSNGWLYNLPAIDFAGGGPVHIASGCTALAYALVLGKRRDHGDPSLRKPHNTT LVFLGTVLIWTGWLGFNGGSSLNASMRAMVAVFNTNTAGCTGILGWVLVDMIRYKGKFTVVGACEGAIAGLVGIT PAAGCVSLWLAACIGFITAIVCSSLKNVNEWINVDEGMDVFKLHGLGGMVGAFLTGLFASEKISALDGSTLSPGA IDGNGVQVGKQLAEICAIASYSFVVSYIMLLILKYIPGMQLRVSDEDEMLGLDRTQFFDEQIGDWSMAMPGSASP TLVGVPKESSTSVTECRERKGSEI* |
| Coding | >Ani_SJS72_1|g3916.t1 ATGACTGAGCCAGTCTACAATTCCTCAACGCCGGAGGGTGGTGATCCTACCCAGGTCGACGTGAACGCGCAATAC ACCGGATTCGAATACAACTATGTCTATATTACTACATGCACATTCATCGTGTTCCTTATCTTACCGGGGATTGGG ATGCTCTACAGCGGCTTGTCCCGGAGGAAATCCGCGCTGGCCCTTCTCTTCCAGGCCTTTATGGTTCTTGCAGTA TCTACATTTCAATGGTTGTTTTGGGGATATTCTCTTACCTATTCAAGAGACGGTGGGCCCTTCATCGGTACACTG AAGAACTTTGGACTGATGGATGTCTTGGTGGCGCCCTCGCCCGGCTCCGCGGTCTTACCGGACGTCGTCTTCTGT CTATTCCAGCTCCTATTTTGTGCATGCACAGTAATGATTGTCGTTGGAGGTGCCTTTGAACGAGGTGGCATTGTA CCTTCATTGATCTTCAGCTTCTTCTGGGCGACCATAGTTTACTGCCCGCTAGCCCGGTGGACATGGAGCAGTAAC GGATGGCTCTACAACCTACCGGCCATTGATTTTGCGGGAGGCGGCCCCGTGCATATCGCGTCCGGGTGTACAGCT CTGGCGTATGCGTTGGTTTTGGGAAAGCGTAGGGATCACGGGGACCCTTCACTGCGCAAGCCGCACAATACGACT CTGGTCTTCCTCGGGACAGTATTGATCTGGACTGGATGGTTGGGGTTCAATGGGGGCTCGAGTCTGAACGCCAGC ATGCGTGCCATGGTTGCTGTTTTCAACACCAATACCGCCGGTTGCACAGGCATTCTCGGATGGGTTCTGGTAGAC ATGATCCGGTACAAAGGAAAGTTCACAGTTGTTGGTGCGTGTGAAGGTGCTATTGCTGGCTTGGTCGGGATCACG CCAGCGGCTGGTTGCGTCTCGCTATGGCTCGCAGCATGCATCGGTTTCATTACCGCCATTGTATGCTCCTCCCTC AAAAATGTGAACGAGTGGATCAATGTCGACGAGGGTATGGATGTGTTCAAGCTGCATGGCCTTGGTGGTATGGTG GGAGCTTTCCTGACGGGACTGTTCGCAAGCGAAAAGATATCTGCCTTGGATGGCAGCACGCTATCCCCCGGAGCG ATTGACGGCAATGGAGTTCAGGTTGGGAAGCAATTGGCAGAGATCTGTGCTATCGCATCGTACTCCTTCGTGGTA TCCTACATTATGCTTCTCATTCTCAAATATATTCCCGGAATGCAGTTGCGGGTGAGTGACGAGGATGAAATGCTG GGACTCGATCGGACTCAGTTTTTCGACGAGCAGATTGGGGATTGGTCCATGGCGATGCCTGGCTCAGCGAGTCCC ACGCTGGTCGGGGTACCCAAAGAATCCTCTACGAGTGTGACGGAGTGCCGGGAAAGAAAGGGGAGCGAAATATAG |
| Transcript | >Ani_SJS72_1|g3916.t1 ATGACTGAGCCAGTCTACAATTCCTCAACGCCGGAGGGTGGTGATCCTACCCAGGTCGACGTGAACGCGCAATAC ACCGGATTCGAATACAACTATGTCTATATTACTACATGCACATTCATCGTGTTCCTTATCTTACCGGGGATTGGG ATGCTCTACAGCGGCTTGTCCCGGAGGAAATCCGCGCTGGCCCTTCTCTTCCAGGCCTTTATGGTTCTTGCAGTA TCTACATTTCAATGGTTGTTTTGGGGATATTCTCTTACCTATTCAAGAGACGGTGGGCCCTTCATCGGTACACTG AAGAACTTTGGACTGATGGATGTCTTGGTGGCGCCCTCGCCCGGCTCCGCGGTCTTACCGGACGTCGTCTTCTGT CTATTCCAGCTCCTATTTTGTGCATGCACAGTAATGATTGTCGTTGGAGGTGCCTTTGAACGAGGTGGCATTGTA CCTTCATTGATCTTCAGCTTCTTCTGGGCGACCATAGTTTACTGCCCGCTAGCCCGGTGGACATGGAGCAGTAAC GGATGGCTCTACAACCTACCGGCCATTGATTTTGCGGGAGGCGGCCCCGTGCATATCGCGTCCGGGTGTACAGCT CTGGCGTATGCGTTGGTTTTGGGAAAGCGTAGGGATCACGGGGACCCTTCACTGCGCAAGCCGCACAATACGACT CTGGTCTTCCTCGGGACAGTATTGATCTGGACTGGATGGTTGGGGTTCAATGGGGGCTCGAGTCTGAACGCCAGC ATGCGTGCCATGGTTGCTGTTTTCAACACCAATACCGCCGGTTGCACAGGCATTCTCGGATGGGTTCTGGTAGAC ATGATCCGGTACAAAGGAAAGTTCACAGTTGTTGGTGCGTGTGAAGGTGCTATTGCTGGCTTGGTCGGGATCACG CCAGCGGCTGGTTGCGTCTCGCTATGGCTCGCAGCATGCATCGGTTTCATTACCGCCATTGTATGCTCCTCCCTC AAAAATGTGAACGAGTGGATCAATGTCGACGAGGGTATGGATGTGTTCAAGCTGCATGGCCTTGGTGGTATGGTG GGAGCTTTCCTGACGGGACTGTTCGCAAGCGAAAAGATATCTGCCTTGGATGGCAGCACGCTATCCCCCGGAGCG ATTGACGGCAATGGAGTTCAGGTTGGGAAGCAATTGGCAGAGATCTGTGCTATCGCATCGTACTCCTTCGTGGTA TCCTACATTATGCTTCTCATTCTCAAATATATTCCCGGAATGCAGTTGCGGGTGAGTGACGAGGATGAAATGCTG GGACTCGATCGGACTCAGTTTTTCGACGAGCAGATTGGGGATTGGTCCATGGCGATGCCTGGCTCAGCGAGTCCC ACGCTGGTCGGGGTACCCAAAGAATCCTCTACGAGTGTGACGGAGTGCCGGGAAAGAAAGGGGAGCGAAATATAG |
| Gene | >Ani_SJS72_1|g3916.t1 ATGACTGAGGTGCGTGTTTGCTTTTGCGACAGCCGGTGACATTCCCAGACTTGTTTGGCTAATGATGCACGCGAT GTCACAGCCAGTCTACAATTCCTCAACGCCGGAGGGTGGTGATCCTACCCAGGTCGACGTGAACGCGCAATACAC CGGATTCGAATACAACTATGTCTATATTACTACATGCACATTCATCGTGTTCCTTATCTTACCGGGGATTGGGAT GCTCTACAGCGGCTTGTCCCGGAGGAAATCCGCGCTGGCCCTTCTCTTCCAGGCCTTTATGGTTCTTGCAGTGTA AGTTCGCCAGTCGCGACCCTTTTGATATTTAGCGCAACGCTAATCATGATATAGATCTACATTTCAATGGTTGTT TTGGGGATATTCTCTTACCTATTCAAGAGACGGTGGGCCCTTCATCGGTACACTGAAGAACTTTGGACTGATGGA TGTCTTGGTGGCGCCCTCGCCCGGCTCCGCGGTCTTACCGGACGTCGTCTTCTGTCTATTCCAGCTCCTATTTTG TGCATGCACAGTAAGTTTGTCCAGGTGATACAAAAGCGATGTACTAAGGTTTTAGGTAATGATTGTCGTTGGAGG TGCCTTTGAACGAGGTGGCATTGTACCTTCATTGATCTTCAGCTTCTTCTGGGCGACCATAGTTTACTGCCCGCT AGCCCGGTGGACATGGAGCAGTAACGGATGGCTCTACAACCTACCGGCCATTGATTTTGCGGGAGGCGGCCCCGT GCATATCGCGTCCGGGTGTACAGCTCTGGCGTATGCGTTGGTTTTGGGAAAGCGTAGGGATCACGGGGACCCTTC ACTGCGCAAGCCGCACAATACGACTCTGGTCTTCCTCGGGACAGTATTGATCTGGACTGGATGGTTGGGGTTCAA TGTACGTGAGGTCCTGTCTTCTCCAGTATTCGAGTCTAACAGCAATATGATGATAGGGGGGCTCGAGTCTGAACG CCAGCATGCGTGCCATGGTTGCTGTTTTCAACACCAATACCGCCGGTTGCACAGGCATTCTCGGATGGGTTCTGG TAGACATGATCCGGTACAAAGGAAAGTTCACAGTTGTTGGTGCGTGTGAAGGTGCTATTGCTGGCTTGGTCGGGA TCACGCCAGCGGCTGGTTGCGTCTCGCTATGGCTCGCAGCATGCATCGGTTTCATTACCGCCATTGTATGCTCCT CCCTCAAAAATGTGAACGAGTGGATCAATGTCGACGAGGGTATGGATGTGTTCAAGCTGCATGGCCTTGGTGGTA TGGTGGGAGCTTTCCTGACGGGACTGTTCGCAAGCGAAAAGATATCTGCCTTGGATGGCAGCACGCTATCCCCCG GAGCGATTGACGGCAATGGAGTTCAGGTTGGGAAGCAATTGGCAGAGATCTGTGCTATCGCATCGTACTCCTTCG TGGTATCCTACATTATGCTTCTCATTCTCAAATATATTCCCGGAATGCAGTTGCGGGTGAGTGACGAGGATGAAA TGCTGGGACTCGATCGGACTCAGTTTTTCGACGAGCAGATTGGGGATTGGTCCATGGCGATGCCTGGCTCAGCGA GTCCCACGCTGGTCGGGGTACCCAAAGAATCCTCTACGAGTGTGACGGAGTGCCGGGAAAGAAAGGGGAGCGAAA TATAG |