© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g3905.t1 |
| Gene name | |
| Location | scaffold_022:369304..370965 |
| Strand | - |
| Gene length (bp) | 1661 |
| Transcript length (bp) | 1536 |
| Coding sequence length (bp) | 1536 |
| Protein length (aa) | 512 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 9.2E-82 | 49 | 502 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.1E-19 | 54 | 450 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 45 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 94 | 116 | 22 |
| 2 | 123 | 142 | 19 |
| 3 | 147 | 166 | 19 |
| 4 | 179 | 201 | 22 |
| 5 | 221 | 243 | 22 |
| 6 | 305 | 327 | 22 |
| 7 | 337 | 359 | 22 |
| 8 | 366 | 388 | 22 |
| 9 | 403 | 425 | 22 |
| 10 | 437 | 459 | 22 |
| 11 | 469 | 488 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g3905.t1 MSEKAEVPLADVTPDQGHGTYLDIQTMPSVREQARGLWNSKRAVGAALACSSAATLVGYDTTLIGSIIANEQFII QFGVYDTSLQQWTLPATRQMIWTMVQFISAAMGAVIVGYLSDRLGRLVCLYGTVVLTILGTLMELFSPNWKVWVV GKFIMGCSMGFMQSILPSCISELAPFHMRGFLLSLFQFWLILGTFFAACVLEGTSTLDGPWSWKAAIASQFGISL ICLLLIFCLVPESPYYLVRQNRIDSARKVLLMLRGNELSYNVDEDLDMIIRTIELEEQAAATSASYADCFVGVNR RRTFVACLPIAMQQFMGFPLCGNYLSYFLKLAGLKNAFLVQVLSSLLSLFAILLAFAMIERVGRRLQLLVGCCMM LPCLLGLGILGLVNYGTAANGRCLAGLTIVWSIFYYFSCGAVGWTILGEVSSTRLRTKTSSVAVSVNAIINMAWA MAVPYLINADEAKLGPKSAFIFLGTGSALCLVVYFTVPETKGKTFEQLNDLFEQRRSARRF* |
| Coding | >Ani_SJS72_1|g3905.t1 ATGTCTGAGAAAGCTGAAGTTCCACTTGCGGACGTAACCCCGGACCAGGGTCATGGCACCTACCTTGATATTCAG ACTATGCCCAGCGTGCGTGAGCAGGCAAGAGGCCTTTGGAATTCTAAGAGAGCTGTAGGGGCCGCCCTCGCGTGC TCCTCGGCGGCAACGCTAGTTGGTTATGATACGACTCTCATCGGCTCCATTATTGCCAATGAGCAGTTCATCATA CAATTTGGTGTATACGACACCTCCTTGCAACAATGGACACTCCCTGCTACTCGCCAGATGATTTGGACGATGGTC CAATTTATTTCTGCTGCAATGGGCGCTGTGATCGTTGGATACTTGAGTGATCGGCTGGGCCGGCTGGTCTGTCTA TATGGTACTGTCGTGTTGACAATACTTGGTACTCTGATGGAGCTCTTCTCTCCTAACTGGAAAGTCTGGGTCGTC GGAAAGTTCATCATGGGGTGCTCCATGGGCTTCATGCAATCGATTCTGCCTTCTTGCATCTCCGAACTGGCCCCG TTCCATATGCGAGGGTTTCTATTGTCTCTTTTCCAGTTCTGGCTCATATTGGGAACGTTTTTCGCCGCCTGTGTC TTAGAGGGTACTTCGACGCTTGACGGACCCTGGTCCTGGAAGGCCGCCATCGCCTCCCAATTCGGCATCTCTCTG ATCTGTCTGCTTTTAATTTTCTGCCTAGTCCCAGAATCTCCTTATTACCTCGTTCGACAAAACCGTATTGACAGT GCACGTAAGGTCTTGCTGATGCTGCGCGGTAATGAACTCTCCTACAACGTGGACGAGGATCTAGATATGATTATT AGGACGATCGAGCTGGAAGAGCAAGCAGCCGCTACCTCCGCCTCATACGCAGACTGCTTCGTCGGGGTGAACCGG CGCCGCACGTTCGTGGCCTGCTTGCCGATTGCGATGCAGCAGTTCATGGGCTTCCCCCTGTGCGGCAACTATCTC TCCTATTTTCTGAAGTTGGCGGGTCTGAAGAACGCTTTCTTGGTCCAGGTTCTTTCCTCGTTGCTCTCGCTGTTT GCCATTCTCCTGGCCTTTGCAATGATCGAGCGAGTGGGGCGCCGGCTGCAGCTCCTTGTCGGTTGCTGCATGATG CTCCCCTGCCTGCTGGGCTTGGGCATTCTTGGACTTGTCAACTACGGTACCGCCGCGAACGGGCGATGCTTAGCG GGCCTCACCATTGTTTGGTCAATCTTCTACTACTTCTCCTGCGGCGCGGTGGGCTGGACCATCTTAGGCGAGGTC TCCTCCACACGGCTGCGCACCAAGACGAGCTCGGTCGCCGTCAGCGTCAACGCCATCATTAACATGGCTTGGGCG ATGGCAGTCCCTTATCTAATCAATGCGGATGAGGCCAAATTGGGCCCCAAGTCGGCCTTTATTTTCTTAGGAACA GGTTCGGCGCTCTGCCTGGTCGTGTATTTCACTGTTCCCGAGACCAAAGGCAAGACCTTTGAGCAGCTGAATGAC TTGTTCGAACAGCGAAGGTCGGCTCGGAGGTTTTAA |
| Transcript | >Ani_SJS72_1|g3905.t1 ATGTCTGAGAAAGCTGAAGTTCCACTTGCGGACGTAACCCCGGACCAGGGTCATGGCACCTACCTTGATATTCAG ACTATGCCCAGCGTGCGTGAGCAGGCAAGAGGCCTTTGGAATTCTAAGAGAGCTGTAGGGGCCGCCCTCGCGTGC TCCTCGGCGGCAACGCTAGTTGGTTATGATACGACTCTCATCGGCTCCATTATTGCCAATGAGCAGTTCATCATA CAATTTGGTGTATACGACACCTCCTTGCAACAATGGACACTCCCTGCTACTCGCCAGATGATTTGGACGATGGTC CAATTTATTTCTGCTGCAATGGGCGCTGTGATCGTTGGATACTTGAGTGATCGGCTGGGCCGGCTGGTCTGTCTA TATGGTACTGTCGTGTTGACAATACTTGGTACTCTGATGGAGCTCTTCTCTCCTAACTGGAAAGTCTGGGTCGTC GGAAAGTTCATCATGGGGTGCTCCATGGGCTTCATGCAATCGATTCTGCCTTCTTGCATCTCCGAACTGGCCCCG TTCCATATGCGAGGGTTTCTATTGTCTCTTTTCCAGTTCTGGCTCATATTGGGAACGTTTTTCGCCGCCTGTGTC TTAGAGGGTACTTCGACGCTTGACGGACCCTGGTCCTGGAAGGCCGCCATCGCCTCCCAATTCGGCATCTCTCTG ATCTGTCTGCTTTTAATTTTCTGCCTAGTCCCAGAATCTCCTTATTACCTCGTTCGACAAAACCGTATTGACAGT GCACGTAAGGTCTTGCTGATGCTGCGCGGTAATGAACTCTCCTACAACGTGGACGAGGATCTAGATATGATTATT AGGACGATCGAGCTGGAAGAGCAAGCAGCCGCTACCTCCGCCTCATACGCAGACTGCTTCGTCGGGGTGAACCGG CGCCGCACGTTCGTGGCCTGCTTGCCGATTGCGATGCAGCAGTTCATGGGCTTCCCCCTGTGCGGCAACTATCTC TCCTATTTTCTGAAGTTGGCGGGTCTGAAGAACGCTTTCTTGGTCCAGGTTCTTTCCTCGTTGCTCTCGCTGTTT GCCATTCTCCTGGCCTTTGCAATGATCGAGCGAGTGGGGCGCCGGCTGCAGCTCCTTGTCGGTTGCTGCATGATG CTCCCCTGCCTGCTGGGCTTGGGCATTCTTGGACTTGTCAACTACGGTACCGCCGCGAACGGGCGATGCTTAGCG GGCCTCACCATTGTTTGGTCAATCTTCTACTACTTCTCCTGCGGCGCGGTGGGCTGGACCATCTTAGGCGAGGTC TCCTCCACACGGCTGCGCACCAAGACGAGCTCGGTCGCCGTCAGCGTCAACGCCATCATTAACATGGCTTGGGCG ATGGCAGTCCCTTATCTAATCAATGCGGATGAGGCCAAATTGGGCCCCAAGTCGGCCTTTATTTTCTTAGGAACA GGTTCGGCGCTCTGCCTGGTCGTGTATTTCACTGTTCCCGAGACCAAAGGCAAGACCTTTGAGCAGCTGAATGAC TTGTTCGAACAGCGAAGGTCGGCTCGGAGGTTTTAA |
| Gene | >Ani_SJS72_1|g3905.t1 ATGTCTGAGAAAGCTGAAGTTCCACTTGCGGACGTAACCCCGGACCAGGGTCATGGCACCTACCTTGATATTCAG ACTATGCCCAGCGTGCGTGAGCAGGCAAGAGGCCTTTGGAATTCTAAGAGAGCTGTAGGGGCCGGTGAGTGACTC CGCTCTTCTTCAAAATATCATTATGTGACGAAGCCCAGATTTGACTGACTTGGCAGCCCTCGCGTGCTCCTCGGC GGCAACGCTAGTTGGTTATGATACGACTCTCATCGGCTCCATTATTGCCAATGAGCAGTTCATCATACAATTTGG TGTATACGACACCTCCTTGCAACAATGGACACTCCCTGCTACTCGCCAGATGATTTGGACGATGGTCCAATTTAT TTCTGCTGCAATGGGCGCTGTGATCGTTGGATACTTGAGTGATCGGCTGGGCCGGCTGGTCTGTCTATATGGTAC TGTCGTGTGGGTCCCCTGATCCGCGGCCTTCTTCAAAGCATGCTTCCCTAATCATGGCTAATAGGTTGACAATAC TTGGTACTCTGATGGAGCTCTTCTCTCCTAACTGGAAAGTCTGGGTCGTCGGAAAGTTCATCATGGGGTGCTCCA TGGGCTTCATGCAATCGATTCTGCCTTCTTGCATCTCCGAACTGGCCCCGTTCCATATGCGAGGGTTTCTATTGT CTCTTTTCCAGTTCTGGCTCATATTGGGAACGTTTTTCGCCGCCTGTGTCTTAGAGGGTACTTCGACGCTTGACG GACCCTGGTCCTGGAAGGCCGCCATCGCCTCCCAATTCGGCATCTCTCTGATCTGTCTGCTTTTAATTTTCTGCC TAGTCCCAGAATCTCCTTATTACCTCGTTCGACAAAACCGTATTGACAGTGCACGTAAGGTCTTGCTGATGCTGC GCGGTAATGAACTCTCCTACAACGTGGACGAGGATCTAGATATGATTATTAGGACGATCGAGCTGGAAGAGCAAG CAGCCGCTACCTCCGCCTCATACGCAGACTGCTTCGTCGGGGTGAACCGGCGCCGCACGTTCGTGGCCTGCTTGC CGATTGCGATGCAGCAGTTCATGGGCTTCCCCCTGTGCGGCAACTATCTCTCCTATTTTCTGAAGTTGGCGGGTC TGAAGAACGCTTTCTTGGTCCAGGTTCTTTCCTCGTTGCTCTCGCTGTTTGCCATTCTCCTGGCCTTTGCAATGA TCGAGCGAGTGGGGCGCCGGCTGCAGCTCCTTGTCGGTTGCTGCATGATGCTCCCCTGCCTGCTGGGCTTGGGCA TTCTTGGACTTGTCAACTACGGTACCGCCGCGAACGGGCGATGCTTAGCGGGCCTCACCATTGTTTGGTCAATCT TCTACTACTTCTCCTGCGGCGCGGTGGGCTGGACCATCTTAGGCGAGGTCTCCTCCACACGGCTGCGCACCAAGA CGAGCTCGGTCGCCGTCAGCGTCAACGCCATCATTAACATGGCTTGGGCGATGGCAGTCCCTTATCTAATCAATG CGGATGAGGCCAAATTGGGCCCCAAGTCGGCCTTTATTTTCTTAGGAACAGGTTCGGCGCTCTGCCTGGTCGTGT ATTTCACTGTTCCCGAGACCAAAGGCAAGACCTTTGAGCAGCTGAATGACTTGTTCGAACAGCGAAGGTCGGCTC GGAGGTTTTAA |