Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g3904.t1
Gene name
Location	scaffold_022:368197..368739
Strand	+
Gene length (bp)	542
Transcript length (bp)	429
Coding sequence length (bp)	429
Protein length (aa)	143

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01042	Ribonuc_L-PSP	Endoribonuclease L-PSP	2.1E-16	17	131

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 53	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g3904.t1 MSLLRYYNKGFGEAALKSHAYNQAVRVGDTIHLSGQGGWKQEEPFEIYTDINAQIDQAFANVDFQLRNAGGQGWS QVYKVRSYHIPLVEEAQDAMVRNFRKWMVNHKALWTCMQVSRLGADDMRVEIEVEAYDPEGAKAATS*
Coding	>Ani_SJS72_1\|g3904.t1 ATGTCCCTTCTCCGCTACTACAACAAAGGTTTTGGTGAGGCCGCCTTGAAGTCCCACGCCTACAACCAAGCCGTC CGCGTCGGCGACACCATCCACCTCTCCGGTCAGGGTGGCTGGAAACAGGAGGAACCTTTCGAGATCTACACCGAC ATCAACGCCCAGATTGACCAGGCTTTTGCCAATGTCGATTTCCAGCTGCGCAACGCCGGTGGTCAGGGCTGGTCT CAGGTATACAAGGTCCGCTCCTACCACATACCTTTGGTCGAAGAGGCACAGGATGCCATGGTTCGCAATTTCCGC AAGTGGATGGTCAACCACAAGGCGCTATGGACGTGCATGCAGGTTAGCCGCCTTGGCGCCGACGACATGCGGGTT GAGATTGAGGTCGAAGCATACGATCCTGAGGGTGCTAAGGCAGCTACATCATAG
Transcript	>Ani_SJS72_1\|g3904.t1 ATGTCCCTTCTCCGCTACTACAACAAAGGTTTTGGTGAGGCCGCCTTGAAGTCCCACGCCTACAACCAAGCCGTC CGCGTCGGCGACACCATCCACCTCTCCGGTCAGGGTGGCTGGAAACAGGAGGAACCTTTCGAGATCTACACCGAC ATCAACGCCCAGATTGACCAGGCTTTTGCCAATGTCGATTTCCAGCTGCGCAACGCCGGTGGTCAGGGCTGGTCT CAGGTATACAAGGTCCGCTCCTACCACATACCTTTGGTCGAAGAGGCACAGGATGCCATGGTTCGCAATTTCCGC AAGTGGATGGTCAACCACAAGGCGCTATGGACGTGCATGCAGGTTAGCCGCCTTGGCGCCGACGACATGCGGGTT GAGATTGAGGTCGAAGCATACGATCCTGAGGGTGCTAAGGCAGCTACATCATAG
Gene	>Ani_SJS72_1\|g3904.t1 ATGTCCCTTCTCCGCTACTACAACAAAGGTTTTGGTGAGGCCGCCTTGAAGTCCCACGCCTACAACCAAGCCGTC CGCGTCGGCGACACCATCCACCTCTCCGGTCAGGGTATGTCACATCCCCCTCTCCGCAGCGACTGGCCTTCAATG AAAAACACACTGCACCAGCGCAGGAGGGAAAAAAACACCAATGGAAAAAGCAAAAAGTAATAAAGACTGTAGGTG GCTGGAAACAGGAGGAACCTTTCGAGATCTACACCGACATCAACGCCCAGATTGACCAGGCTTTTGCCAATGTCG ATTTCCAGCTGCGCAACGCCGGTGGTCAGGGCTGGTCTCAGGTATACAAGGTCCGCTCCTACCACATACCTTTGG TCGAAGAGGCACAGGATGCCATGGTTCGCAATTTCCGCAAGTGGATGGTCAACCACAAGGCGCTATGGACGTGCA TGCAGGTTAGCCGCCTTGGCGCCGACGACATGCGGGTTGAGATTGAGGTCGAAGCATACGATCCTGAGGGTGCTA AGGCAGCTACATCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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