Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g3890.t1
Gene name
Locationscaffold_022:323723..325109
Strand+
Gene length (bp)1386
Transcript length (bp)1386
Coding sequence length (bp)1386
Protein length (aa) 462

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 26 0.45

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 262 284 22
3 299 318 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g3890.t1
MATSRSFSGVLSLLLLFQLSSFVSAAPWIVTADYQEVVTTERHYYATYTTTLVEQITPTVTSMPEAVSTATSLGS
SNYYYYYNDDEDAEKDVTIIQQLYPTGVGSVVDDYDYGYGYGYDDDDIYHSTKFVVNMTYSAPTGCSSRWTQTTA
VEVVPPTEVQDLLPRTAVATSISVDSSRPFQPTTYTIDIVYVDPTQIPTSSLESMSLYNRPTSLYTASSCAYTGS
NGNGYYSGSSYYGDYGYDDDYNWFTDDYYMGISPLALTLILTLGWIGLWLILGFLEAWIRFRRLMMGWQTRRGLP
VCWSLTILPFTLLLLCFFRKGYRARTDADGEVLRKRWKAMGFWTKLRLFFVWGFRYKYPPVLGPAPARVKTSKQP
AKNPGPRLLEPSPSPSVAPQSRPGSASAPTAAAAAAPASTSADPEMAIVSSTPVTHPQEATVPPPTTTTAPEAPS
HHQDDEISRAN*
Coding >Ani_SJS72_1|g3890.t1
ATGGCAACCTCACGTTCGTTTTCGGGGGTCCTCTCCCTTCTGCTACTGTTCCAACTGTCTTCTTTCGTTTCTGCT
GCCCCATGGATTGTCACTGCGGACTACCAGGAGGTGGTCACCACCGAACGGCATTACTATGCAACATACACCACC
ACTCTCGTTGAGCAAATCACTCCCACCGTCACGTCCATGCCTGAGGCCGTCTCAACCGCCACCTCCCTCGGCTCT
TCAAACTACTACTACTACTACAACGACGATGAAGACGCCGAGAAGGATGTGACTATCATTCAACAGCTTTACCCC
ACAGGCGTCGGATCCGTGGTTGATGATTACGACTATGGTTACGGCTATGGCTATGACGACGATGATATCTACCAC
AGCACCAAGTTCGTTGTCAACATGACTTATTCAGCGCCCACCGGTTGCTCGTCTCGCTGGACCCAAACAACAGCC
GTCGAGGTTGTTCCGCCCACAGAGGTCCAGGATCTGCTCCCACGCACGGCTGTTGCTACATCGATCTCGGTCGAT
TCCTCGAGGCCTTTTCAGCCCACGACCTACACCATCGACATTGTCTATGTTGATCCGACGCAGATCCCCACGAGC
TCACTAGAGTCGATGAGCTTGTACAACCGGCCTACCTCATTGTACACTGCTTCCAGCTGTGCCTACACGGGCAGC
AACGGGAACGGCTACTACAGCGGCAGCTCGTACTACGGCGACTACGGCTATGACGACGATTACAACTGGTTCACA
GACGATTATTACATGGGCATTTCCCCGTTGGCCCTCACCCTTATTTTGACACTTGGCTGGATTGGCCTCTGGTTG
ATTTTAGGTTTCCTGGAAGCGTGGATTCGGTTCCGCCGCCTGATGATGGGCTGGCAAACACGTCGCGGTCTCCCC
GTCTGCTGGTCACTGACCATTCTCCCCTTCACTCTGTTACTGCTATGCTTTTTCCGGAAGGGTTATCGAGCACGT
ACCGATGCAGATGGGGAGGTCCTTCGCAAGCGGTGGAAGGCAATGGGGTTCTGGACTAAGCTGCGTCTCTTCTTC
GTCTGGGGATTCCGGTACAAATACCCGCCGGTGTTGGGTCCTGCACCTGCCCGGGTCAAGACTAGCAAGCAGCCA
GCAAAGAATCCCGGTCCTCGACTGTTGGAGCCCAGTCCCTCGCCCAGCGTGGCGCCACAATCGCGGCCAGGATCA
GCCTCTGCACCCACCGCTGCTGCTGCTGCTGCTCCGGCTTCTACTTCCGCTGATCCCGAAATGGCGATCGTTTCT
TCCACCCCAGTCACGCACCCACAAGAAGCCACTGTGCCGCCGCCAACAACGACTACTGCCCCTGAAGCGCCATCT
CATCACCAGGATGATGAGATTAGTCGGGCGAACTGA
Transcript >Ani_SJS72_1|g3890.t1
ATGGCAACCTCACGTTCGTTTTCGGGGGTCCTCTCCCTTCTGCTACTGTTCCAACTGTCTTCTTTCGTTTCTGCT
GCCCCATGGATTGTCACTGCGGACTACCAGGAGGTGGTCACCACCGAACGGCATTACTATGCAACATACACCACC
ACTCTCGTTGAGCAAATCACTCCCACCGTCACGTCCATGCCTGAGGCCGTCTCAACCGCCACCTCCCTCGGCTCT
TCAAACTACTACTACTACTACAACGACGATGAAGACGCCGAGAAGGATGTGACTATCATTCAACAGCTTTACCCC
ACAGGCGTCGGATCCGTGGTTGATGATTACGACTATGGTTACGGCTATGGCTATGACGACGATGATATCTACCAC
AGCACCAAGTTCGTTGTCAACATGACTTATTCAGCGCCCACCGGTTGCTCGTCTCGCTGGACCCAAACAACAGCC
GTCGAGGTTGTTCCGCCCACAGAGGTCCAGGATCTGCTCCCACGCACGGCTGTTGCTACATCGATCTCGGTCGAT
TCCTCGAGGCCTTTTCAGCCCACGACCTACACCATCGACATTGTCTATGTTGATCCGACGCAGATCCCCACGAGC
TCACTAGAGTCGATGAGCTTGTACAACCGGCCTACCTCATTGTACACTGCTTCCAGCTGTGCCTACACGGGCAGC
AACGGGAACGGCTACTACAGCGGCAGCTCGTACTACGGCGACTACGGCTATGACGACGATTACAACTGGTTCACA
GACGATTATTACATGGGCATTTCCCCGTTGGCCCTCACCCTTATTTTGACACTTGGCTGGATTGGCCTCTGGTTG
ATTTTAGGTTTCCTGGAAGCGTGGATTCGGTTCCGCCGCCTGATGATGGGCTGGCAAACACGTCGCGGTCTCCCC
GTCTGCTGGTCACTGACCATTCTCCCCTTCACTCTGTTACTGCTATGCTTTTTCCGGAAGGGTTATCGAGCACGT
ACCGATGCAGATGGGGAGGTCCTTCGCAAGCGGTGGAAGGCAATGGGGTTCTGGACTAAGCTGCGTCTCTTCTTC
GTCTGGGGATTCCGGTACAAATACCCGCCGGTGTTGGGTCCTGCACCTGCCCGGGTCAAGACTAGCAAGCAGCCA
GCAAAGAATCCCGGTCCTCGACTGTTGGAGCCCAGTCCCTCGCCCAGCGTGGCGCCACAATCGCGGCCAGGATCA
GCCTCTGCACCCACCGCTGCTGCTGCTGCTGCTCCGGCTTCTACTTCCGCTGATCCCGAAATGGCGATCGTTTCT
TCCACCCCAGTCACGCACCCACAAGAAGCCACTGTGCCGCCGCCAACAACGACTACTGCCCCTGAAGCGCCATCT
CATCACCAGGATGATGAGATTAGTCGGGCGAACTGA
Gene >Ani_SJS72_1|g3890.t1
ATGGCAACCTCACGTTCGTTTTCGGGGGTCCTCTCCCTTCTGCTACTGTTCCAACTGTCTTCTTTCGTTTCTGCT
GCCCCATGGATTGTCACTGCGGACTACCAGGAGGTGGTCACCACCGAACGGCATTACTATGCAACATACACCACC
ACTCTCGTTGAGCAAATCACTCCCACCGTCACGTCCATGCCTGAGGCCGTCTCAACCGCCACCTCCCTCGGCTCT
TCAAACTACTACTACTACTACAACGACGATGAAGACGCCGAGAAGGATGTGACTATCATTCAACAGCTTTACCCC
ACAGGCGTCGGATCCGTGGTTGATGATTACGACTATGGTTACGGCTATGGCTATGACGACGATGATATCTACCAC
AGCACCAAGTTCGTTGTCAACATGACTTATTCAGCGCCCACCGGTTGCTCGTCTCGCTGGACCCAAACAACAGCC
GTCGAGGTTGTTCCGCCCACAGAGGTCCAGGATCTGCTCCCACGCACGGCTGTTGCTACATCGATCTCGGTCGAT
TCCTCGAGGCCTTTTCAGCCCACGACCTACACCATCGACATTGTCTATGTTGATCCGACGCAGATCCCCACGAGC
TCACTAGAGTCGATGAGCTTGTACAACCGGCCTACCTCATTGTACACTGCTTCCAGCTGTGCCTACACGGGCAGC
AACGGGAACGGCTACTACAGCGGCAGCTCGTACTACGGCGACTACGGCTATGACGACGATTACAACTGGTTCACA
GACGATTATTACATGGGCATTTCCCCGTTGGCCCTCACCCTTATTTTGACACTTGGCTGGATTGGCCTCTGGTTG
ATTTTAGGTTTCCTGGAAGCGTGGATTCGGTTCCGCCGCCTGATGATGGGCTGGCAAACACGTCGCGGTCTCCCC
GTCTGCTGGTCACTGACCATTCTCCCCTTCACTCTGTTACTGCTATGCTTTTTCCGGAAGGGTTATCGAGCACGT
ACCGATGCAGATGGGGAGGTCCTTCGCAAGCGGTGGAAGGCAATGGGGTTCTGGACTAAGCTGCGTCTCTTCTTC
GTCTGGGGATTCCGGTACAAATACCCGCCGGTGTTGGGTCCTGCACCTGCCCGGGTCAAGACTAGCAAGCAGCCA
GCAAAGAATCCCGGTCCTCGACTGTTGGAGCCCAGTCCCTCGCCCAGCGTGGCGCCACAATCGCGGCCAGGATCA
GCCTCTGCACCCACCGCTGCTGCTGCTGCTGCTCCGGCTTCTACTTCCGCTGATCCCGAAATGGCGATCGTTTCT
TCCACCCCAGTCACGCACCCACAAGAAGCCACTGTGCCGCCGCCAACAACGACTACTGCCCCTGAAGCGCCATCT
CATCACCAGGATGATGAGATTAGTCGGGCGAACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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