Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g3878.t1
Gene name
Locationscaffold_022:293404..294964
Strand+
Gene length (bp)1560
Transcript length (bp)1386
Coding sequence length (bp)1386
Protein length (aa) 462

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 42 0.5

Transmembrane Domains

Domain # Start End Length
1 25 47 22
2 62 81 19
3 165 187 22
4 191 213 22
5 307 326 19
6 336 358 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g3878.t1
MSTDSTSTPAIIDGWIDEPDGRGTWSILSSCLLTIVLCCWTAVMPNIPARSDRWYHGLRDRLHLAALGLLGPEFL
LMLALGQWSSARASVKEFERLATTETTERPIWTLTHAFYADMGGFLVDGPGTERPFPVNAKQLRFLIEKGYVKYP
MIDEDDINDRNKSDAFSRVIAVCQALWLLVNCAMRVAQGLALTTLELTTISFVVVFLVTSFCWRFKPSDISSTLT
LHSNTNFDIMRKQHCPYPSQEWHETPLDFVCNDVSFCAVHWRYYTEILRKMHIPMFSRPMTAKPRDRIVSDNFPV
TDRKADCIATPVLLLFGSIFMLAWNFHFPSPTEHLLWRVASIYNLTFTVIGGLHAGYCDKILLPREYNRRLLLPL
SRPKTSTNPSRQRSCLRNLAAKLRNIDPYRDPKREVPLRVLFPTSVLCAAYCVGRAYVLTEDFIGLRSLPASAFQ
TVSWSDYVPHL*
Coding >Ani_SJS72_1|g3878.t1
ATGTCCACAGATTCCACATCTACCCCAGCCATCATCGATGGCTGGATTGACGAGCCCGATGGACGAGGAACCTGG
TCCATTCTCTCGAGTTGTCTACTGACTATTGTATTGTGTTGCTGGACGGCTGTCATGCCCAACATCCCTGCCCGC
TCCGACCGATGGTATCATGGCCTGCGCGACCGACTGCATTTGGCCGCGCTGGGGCTCCTGGGCCCTGAATTTCTT
CTTATGCTGGCCTTGGGGCAGTGGTCCTCAGCGCGAGCGTCTGTCAAGGAATTTGAGCGACTAGCGACAACGGAG
ACCACCGAGCGACCCATTTGGACCTTAACTCATGCCTTCTATGCGGATATGGGGGGATTCTTGGTGGATGGTCCG
GGAACTGAACGTCCATTTCCAGTAAACGCGAAGCAGCTTCGATTCCTCATCGAGAAGGGGTACGTCAAGTACCCT
ATGATTGACGAAGACGACATCAACGATCGAAACAAATCCGACGCTTTCTCTCGTGTGATCGCAGTCTGCCAGGCA
CTCTGGCTGCTCGTCAACTGCGCCATGCGTGTAGCCCAGGGGCTGGCACTGACTACGTTGGAGCTCACCACCATC
TCCTTTGTGGTTGTGTTCCTAGTGACGTCTTTCTGCTGGCGGTTCAAGCCATCAGACATCTCAAGTACACTGACT
CTGCACTCTAACACCAATTTTGACATCATGCGGAAGCAGCACTGCCCATATCCCTCGCAAGAATGGCACGAGACT
CCCCTTGACTTCGTGTGCAACGATGTATCTTTCTGTGCAGTGCATTGGCGCTACTACACAGAAATCCTGCGCAAA
ATGCATATTCCTATGTTTTCACGCCCCATGACCGCAAAACCACGCGATCGCATTGTCAGTGATAACTTTCCCGTC
ACCGACCGGAAGGCCGATTGTATTGCTACCCCTGTTCTGCTCCTATTCGGTTCGATTTTCATGCTTGCTTGGAAC
TTCCACTTTCCTTCCCCCACCGAACATCTTTTGTGGCGTGTCGCTAGTATCTACAACTTGACATTCACCGTCATT
GGTGGACTGCATGCTGGTTATTGCGACAAGATCTTGCTGCCCAGGGAGTATAACCGGCGACTCCTTCTTCCCTTA
TCGAGACCAAAAACTTCCACCAACCCATCCCGGCAGCGGTCGTGCCTACGAAACTTAGCCGCCAAGTTGAGAAAT
ATCGACCCGTATCGCGATCCGAAGAGGGAGGTTCCCCTTCGCGTGTTATTTCCTACTTCTGTGCTCTGTGCAGCT
TACTGCGTGGGTCGCGCGTACGTTCTTACGGAGGACTTTATCGGATTGCGCAGCCTGCCTGCCAGTGCCTTTCAG
ACGGTCAGCTGGTCGGACTACGTCCCACATCTGTAG
Transcript >Ani_SJS72_1|g3878.t1
ATGTCCACAGATTCCACATCTACCCCAGCCATCATCGATGGCTGGATTGACGAGCCCGATGGACGAGGAACCTGG
TCCATTCTCTCGAGTTGTCTACTGACTATTGTATTGTGTTGCTGGACGGCTGTCATGCCCAACATCCCTGCCCGC
TCCGACCGATGGTATCATGGCCTGCGCGACCGACTGCATTTGGCCGCGCTGGGGCTCCTGGGCCCTGAATTTCTT
CTTATGCTGGCCTTGGGGCAGTGGTCCTCAGCGCGAGCGTCTGTCAAGGAATTTGAGCGACTAGCGACAACGGAG
ACCACCGAGCGACCCATTTGGACCTTAACTCATGCCTTCTATGCGGATATGGGGGGATTCTTGGTGGATGGTCCG
GGAACTGAACGTCCATTTCCAGTAAACGCGAAGCAGCTTCGATTCCTCATCGAGAAGGGGTACGTCAAGTACCCT
ATGATTGACGAAGACGACATCAACGATCGAAACAAATCCGACGCTTTCTCTCGTGTGATCGCAGTCTGCCAGGCA
CTCTGGCTGCTCGTCAACTGCGCCATGCGTGTAGCCCAGGGGCTGGCACTGACTACGTTGGAGCTCACCACCATC
TCCTTTGTGGTTGTGTTCCTAGTGACGTCTTTCTGCTGGCGGTTCAAGCCATCAGACATCTCAAGTACACTGACT
CTGCACTCTAACACCAATTTTGACATCATGCGGAAGCAGCACTGCCCATATCCCTCGCAAGAATGGCACGAGACT
CCCCTTGACTTCGTGTGCAACGATGTATCTTTCTGTGCAGTGCATTGGCGCTACTACACAGAAATCCTGCGCAAA
ATGCATATTCCTATGTTTTCACGCCCCATGACCGCAAAACCACGCGATCGCATTGTCAGTGATAACTTTCCCGTC
ACCGACCGGAAGGCCGATTGTATTGCTACCCCTGTTCTGCTCCTATTCGGTTCGATTTTCATGCTTGCTTGGAAC
TTCCACTTTCCTTCCCCCACCGAACATCTTTTGTGGCGTGTCGCTAGTATCTACAACTTGACATTCACCGTCATT
GGTGGACTGCATGCTGGTTATTGCGACAAGATCTTGCTGCCCAGGGAGTATAACCGGCGACTCCTTCTTCCCTTA
TCGAGACCAAAAACTTCCACCAACCCATCCCGGCAGCGGTCGTGCCTACGAAACTTAGCCGCCAAGTTGAGAAAT
ATCGACCCGTATCGCGATCCGAAGAGGGAGGTTCCCCTTCGCGTGTTATTTCCTACTTCTGTGCTCTGTGCAGCT
TACTGCGTGGGTCGCGCGTACGTTCTTACGGAGGACTTTATCGGATTGCGCAGCCTGCCTGCCAGTGCCTTTCAG
ACGGTCAGCTGGTCGGACTACGTCCCACATCTGTAG
Gene >Ani_SJS72_1|g3878.t1
ATGTCCACAGATTCCACATCTACCCCAGCCATCATCGATGGCTGGATTGACGAGCCCGATGGACGAGGAACCTGG
TCCATTCTCTCGAGTTGTCTACTGACTATTGTATTGTGTTGCTGGACGGCTGTCATGCCCAACATCCCTGCCCGC
TCCGACCGATGGTATCATGGCCTGCGCGACCGACTGCATTTGGCCGCGCTGGGGCTCCTGGGCCCTGAATTTCTT
CTTATGCTGGCCTTGGGGCAGTGGTCCTCAGCGCGAGCGTCTGTCAAGGTCTCGATTTCTGCTGTAATTCGATGC
TCAGAGCAACCTAGTCTAATGCCCACGTTAGGAATTTGAGCGACTAGCGACAACGGAGACCACCGAGCGACCCAT
TTGGACCTTAACTCATGCCTTCTATGCGGATATGGGGGGATTCTTGGTGGATGGTCCGGGAACTGAACGTCCATT
TCCAGTAAACGCGAAGCAGCTTCGATTCCTCATCGAGAAGGGGTACGTCAAGTACCCTATGATTGACGAAGACGA
CATCAACGATCGAAACAAATCCGACGCTTTCTCTCGGTATGTACCACACTTACTCAGGTCTGTTGCCCATCGGCT
TATTCGAATGTCCAGTGTGATCGCAGTCTGCCAGGCACTCTGGCTGCTCGTCAACTGCGCCATGCGTGTAGCCCA
GGGGCTGGCACTGACTACGTTGGAGCTCACCACCATCTCCTTTGTGGTTGTGTTCCTAGTGACGTCTTTCTGCTG
GCGGTTCAAGCCATCAGACATCTCAAGTACACTGACTCTGCACTCTAACACCAATTTTGACATCATGCGGAAGCA
GGTACGTTTGACCCTATCCCAGCTGATATTCAGCGCCACTGACAGTATCCCGTTCCGGAGCAGCACTGCCCATAT
CCCTCGCAAGAATGGCACGAGACTCCCCTTGACTTCGTGTGCAACGATGTATCTTTCTGTGCAGTGCATTGGCGC
TACTACACAGAAATCCTGCGCAAAATGCATATTCCTATGTTTTCACGCCCCATGACCGCAAAACCACGCGATCGC
ATTGTCAGTGATAACTTTCCCGTCACCGACCGGAAGGCCGATTGTATTGCTACCCCTGTTCTGCTCCTATTCGGT
TCGATTTTCATGCTTGCTTGGAACTTCCACTTTCCTTCCCCCACCGAACATCTTTTGTGGCGTGTCGCTAGTATC
TACAACTTGACATTCACCGTCATTGGTGGACTGCATGCTGGTTATTGCGACAAGATCTTGCTGCCCAGGGAGTAT
AACCGGCGACTCCTTCTTCCCTTATCGAGACCAAAAACTTCCACCAACCCATCCCGGCAGCGGTCGTGCCTACGA
AACTTAGCCGCCAAGTTGAGAAATATCGACCCGTATCGCGATCCGAAGAGGGAGGTTCCCCTTCGCGTGTTATTT
CCTACTTCTGTGCTCTGTGCAGCTTACTGCGTGGGTCGCGCGTACGTTCTTACGGAGGACTTTATCGGATTGCGC
AGCCTGCCTGCCAGTGCCTTTCAGACGGTCAGCTGGTCGGACTACGTCCCACATCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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