Protein ID | Ani_SJS72_1|g3878.t1 |
Gene name | |
Location | scaffold_022:293404..294964 |
Strand | + |
Gene length (bp) | 1560 |
Transcript length (bp) | 1386 |
Coding sequence length (bp) | 1386 |
Protein length (aa) | 462 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 42 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 25 | 47 | 22 |
2 | 62 | 81 | 19 |
3 | 165 | 187 | 22 |
4 | 191 | 213 | 22 |
5 | 307 | 326 | 19 |
6 | 336 | 358 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g3878.t1 MSTDSTSTPAIIDGWIDEPDGRGTWSILSSCLLTIVLCCWTAVMPNIPARSDRWYHGLRDRLHLAALGLLGPEFL LMLALGQWSSARASVKEFERLATTETTERPIWTLTHAFYADMGGFLVDGPGTERPFPVNAKQLRFLIEKGYVKYP MIDEDDINDRNKSDAFSRVIAVCQALWLLVNCAMRVAQGLALTTLELTTISFVVVFLVTSFCWRFKPSDISSTLT LHSNTNFDIMRKQHCPYPSQEWHETPLDFVCNDVSFCAVHWRYYTEILRKMHIPMFSRPMTAKPRDRIVSDNFPV TDRKADCIATPVLLLFGSIFMLAWNFHFPSPTEHLLWRVASIYNLTFTVIGGLHAGYCDKILLPREYNRRLLLPL SRPKTSTNPSRQRSCLRNLAAKLRNIDPYRDPKREVPLRVLFPTSVLCAAYCVGRAYVLTEDFIGLRSLPASAFQ TVSWSDYVPHL* |
Coding | >Ani_SJS72_1|g3878.t1 ATGTCCACAGATTCCACATCTACCCCAGCCATCATCGATGGCTGGATTGACGAGCCCGATGGACGAGGAACCTGG TCCATTCTCTCGAGTTGTCTACTGACTATTGTATTGTGTTGCTGGACGGCTGTCATGCCCAACATCCCTGCCCGC TCCGACCGATGGTATCATGGCCTGCGCGACCGACTGCATTTGGCCGCGCTGGGGCTCCTGGGCCCTGAATTTCTT CTTATGCTGGCCTTGGGGCAGTGGTCCTCAGCGCGAGCGTCTGTCAAGGAATTTGAGCGACTAGCGACAACGGAG ACCACCGAGCGACCCATTTGGACCTTAACTCATGCCTTCTATGCGGATATGGGGGGATTCTTGGTGGATGGTCCG GGAACTGAACGTCCATTTCCAGTAAACGCGAAGCAGCTTCGATTCCTCATCGAGAAGGGGTACGTCAAGTACCCT ATGATTGACGAAGACGACATCAACGATCGAAACAAATCCGACGCTTTCTCTCGTGTGATCGCAGTCTGCCAGGCA CTCTGGCTGCTCGTCAACTGCGCCATGCGTGTAGCCCAGGGGCTGGCACTGACTACGTTGGAGCTCACCACCATC TCCTTTGTGGTTGTGTTCCTAGTGACGTCTTTCTGCTGGCGGTTCAAGCCATCAGACATCTCAAGTACACTGACT CTGCACTCTAACACCAATTTTGACATCATGCGGAAGCAGCACTGCCCATATCCCTCGCAAGAATGGCACGAGACT CCCCTTGACTTCGTGTGCAACGATGTATCTTTCTGTGCAGTGCATTGGCGCTACTACACAGAAATCCTGCGCAAA ATGCATATTCCTATGTTTTCACGCCCCATGACCGCAAAACCACGCGATCGCATTGTCAGTGATAACTTTCCCGTC ACCGACCGGAAGGCCGATTGTATTGCTACCCCTGTTCTGCTCCTATTCGGTTCGATTTTCATGCTTGCTTGGAAC TTCCACTTTCCTTCCCCCACCGAACATCTTTTGTGGCGTGTCGCTAGTATCTACAACTTGACATTCACCGTCATT GGTGGACTGCATGCTGGTTATTGCGACAAGATCTTGCTGCCCAGGGAGTATAACCGGCGACTCCTTCTTCCCTTA TCGAGACCAAAAACTTCCACCAACCCATCCCGGCAGCGGTCGTGCCTACGAAACTTAGCCGCCAAGTTGAGAAAT ATCGACCCGTATCGCGATCCGAAGAGGGAGGTTCCCCTTCGCGTGTTATTTCCTACTTCTGTGCTCTGTGCAGCT TACTGCGTGGGTCGCGCGTACGTTCTTACGGAGGACTTTATCGGATTGCGCAGCCTGCCTGCCAGTGCCTTTCAG ACGGTCAGCTGGTCGGACTACGTCCCACATCTGTAG |
Transcript | >Ani_SJS72_1|g3878.t1 ATGTCCACAGATTCCACATCTACCCCAGCCATCATCGATGGCTGGATTGACGAGCCCGATGGACGAGGAACCTGG TCCATTCTCTCGAGTTGTCTACTGACTATTGTATTGTGTTGCTGGACGGCTGTCATGCCCAACATCCCTGCCCGC TCCGACCGATGGTATCATGGCCTGCGCGACCGACTGCATTTGGCCGCGCTGGGGCTCCTGGGCCCTGAATTTCTT CTTATGCTGGCCTTGGGGCAGTGGTCCTCAGCGCGAGCGTCTGTCAAGGAATTTGAGCGACTAGCGACAACGGAG ACCACCGAGCGACCCATTTGGACCTTAACTCATGCCTTCTATGCGGATATGGGGGGATTCTTGGTGGATGGTCCG GGAACTGAACGTCCATTTCCAGTAAACGCGAAGCAGCTTCGATTCCTCATCGAGAAGGGGTACGTCAAGTACCCT ATGATTGACGAAGACGACATCAACGATCGAAACAAATCCGACGCTTTCTCTCGTGTGATCGCAGTCTGCCAGGCA CTCTGGCTGCTCGTCAACTGCGCCATGCGTGTAGCCCAGGGGCTGGCACTGACTACGTTGGAGCTCACCACCATC TCCTTTGTGGTTGTGTTCCTAGTGACGTCTTTCTGCTGGCGGTTCAAGCCATCAGACATCTCAAGTACACTGACT CTGCACTCTAACACCAATTTTGACATCATGCGGAAGCAGCACTGCCCATATCCCTCGCAAGAATGGCACGAGACT CCCCTTGACTTCGTGTGCAACGATGTATCTTTCTGTGCAGTGCATTGGCGCTACTACACAGAAATCCTGCGCAAA ATGCATATTCCTATGTTTTCACGCCCCATGACCGCAAAACCACGCGATCGCATTGTCAGTGATAACTTTCCCGTC ACCGACCGGAAGGCCGATTGTATTGCTACCCCTGTTCTGCTCCTATTCGGTTCGATTTTCATGCTTGCTTGGAAC TTCCACTTTCCTTCCCCCACCGAACATCTTTTGTGGCGTGTCGCTAGTATCTACAACTTGACATTCACCGTCATT GGTGGACTGCATGCTGGTTATTGCGACAAGATCTTGCTGCCCAGGGAGTATAACCGGCGACTCCTTCTTCCCTTA TCGAGACCAAAAACTTCCACCAACCCATCCCGGCAGCGGTCGTGCCTACGAAACTTAGCCGCCAAGTTGAGAAAT ATCGACCCGTATCGCGATCCGAAGAGGGAGGTTCCCCTTCGCGTGTTATTTCCTACTTCTGTGCTCTGTGCAGCT TACTGCGTGGGTCGCGCGTACGTTCTTACGGAGGACTTTATCGGATTGCGCAGCCTGCCTGCCAGTGCCTTTCAG ACGGTCAGCTGGTCGGACTACGTCCCACATCTGTAG |
Gene | >Ani_SJS72_1|g3878.t1 ATGTCCACAGATTCCACATCTACCCCAGCCATCATCGATGGCTGGATTGACGAGCCCGATGGACGAGGAACCTGG TCCATTCTCTCGAGTTGTCTACTGACTATTGTATTGTGTTGCTGGACGGCTGTCATGCCCAACATCCCTGCCCGC TCCGACCGATGGTATCATGGCCTGCGCGACCGACTGCATTTGGCCGCGCTGGGGCTCCTGGGCCCTGAATTTCTT CTTATGCTGGCCTTGGGGCAGTGGTCCTCAGCGCGAGCGTCTGTCAAGGTCTCGATTTCTGCTGTAATTCGATGC TCAGAGCAACCTAGTCTAATGCCCACGTTAGGAATTTGAGCGACTAGCGACAACGGAGACCACCGAGCGACCCAT TTGGACCTTAACTCATGCCTTCTATGCGGATATGGGGGGATTCTTGGTGGATGGTCCGGGAACTGAACGTCCATT TCCAGTAAACGCGAAGCAGCTTCGATTCCTCATCGAGAAGGGGTACGTCAAGTACCCTATGATTGACGAAGACGA CATCAACGATCGAAACAAATCCGACGCTTTCTCTCGGTATGTACCACACTTACTCAGGTCTGTTGCCCATCGGCT TATTCGAATGTCCAGTGTGATCGCAGTCTGCCAGGCACTCTGGCTGCTCGTCAACTGCGCCATGCGTGTAGCCCA GGGGCTGGCACTGACTACGTTGGAGCTCACCACCATCTCCTTTGTGGTTGTGTTCCTAGTGACGTCTTTCTGCTG GCGGTTCAAGCCATCAGACATCTCAAGTACACTGACTCTGCACTCTAACACCAATTTTGACATCATGCGGAAGCA GGTACGTTTGACCCTATCCCAGCTGATATTCAGCGCCACTGACAGTATCCCGTTCCGGAGCAGCACTGCCCATAT CCCTCGCAAGAATGGCACGAGACTCCCCTTGACTTCGTGTGCAACGATGTATCTTTCTGTGCAGTGCATTGGCGC TACTACACAGAAATCCTGCGCAAAATGCATATTCCTATGTTTTCACGCCCCATGACCGCAAAACCACGCGATCGC ATTGTCAGTGATAACTTTCCCGTCACCGACCGGAAGGCCGATTGTATTGCTACCCCTGTTCTGCTCCTATTCGGT TCGATTTTCATGCTTGCTTGGAACTTCCACTTTCCTTCCCCCACCGAACATCTTTTGTGGCGTGTCGCTAGTATC TACAACTTGACATTCACCGTCATTGGTGGACTGCATGCTGGTTATTGCGACAAGATCTTGCTGCCCAGGGAGTAT AACCGGCGACTCCTTCTTCCCTTATCGAGACCAAAAACTTCCACCAACCCATCCCGGCAGCGGTCGTGCCTACGA AACTTAGCCGCCAAGTTGAGAAATATCGACCCGTATCGCGATCCGAAGAGGGAGGTTCCCCTTCGCGTGTTATTT CCTACTTCTGTGCTCTGTGCAGCTTACTGCGTGGGTCGCGCGTACGTTCTTACGGAGGACTTTATCGGATTGCGC AGCCTGCCTGCCAGTGCCTTTCAGACGGTCAGCTGGTCGGACTACGTCCCACATCTGTAG |