© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g3854.t1 |
| Gene name | |
| Location | scaffold_022:225820..227440 |
| Strand | + |
| Gene length (bp) | 1620 |
| Transcript length (bp) | 1620 |
| Coding sequence length (bp) | 1620 |
| Protein length (aa) | 540 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01266 | DAO | FAD dependent oxidoreductase | 1.4E-40 | 40 | 396 |
| PF00355 | Rieske | Rieske [2Fe-2S] domain | 9.4E-11 | 461 | 523 |
| PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 1.4E-07 | 43 | 77 |
| PF01494 | FAD_binding_3 | FAD binding domain | 2.7E-06 | 38 | 79 |
| PF00890 | FAD_binding_2 | FAD binding domain | 1.7E-05 | 40 | 88 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0051537 | 2 iron, 2 sulfur cluster binding | Yes |
| GO:0071949 | FAD binding | Yes |
| GO:0000166 | nucleotide binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0050660 | flavin adenine dinucleotide binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0051536 | iron-sulfur cluster binding | No |
| GO:0003674 | molecular_function | No |
| GO:0043168 | anion binding | No |
| GO:0043167 | ion binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0051540 | metal cluster binding | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g3854.t1 MSSPTHWMNTSGETDPVWVHSMPYSKYPKFPSLNENVETDVCIVGAGIAGISIAYELVNRGKRVTMIEARNVLSG ESGRTSGHLSNALDDGYVEIQKKHGTQGAKAAAESHTWALKRVGEISRSLGIECEYRTLPGYEISQYPRGDANHE KEVASLKKEAELAKQLGLPASYRDGLTVKGWDGSIDQRDGAIFADQATFHPTKYFVGVLDWLQKQPNFQCYAHTR MMSSSESGLVQVTTADGYTITAKDMVEATCVPLQKLSVIAEMEFMRTYCIAIRVPKGSIEDCLLYDEAEAYKYVR FTECDEKDDYLVVGGCDHKVGQEHTSGRFEELETWVRERFTKAGTVDYKWSGQIFEPVDYMAFIGKNQGLNHTYI VTGDSGNGLTHGVLAGRLIADEITGIDNPWASLYNPHRLSSIVKSLPSMLQHDVQINAQYKRWMKSDIKDIEDLA VGSGGVIKEGLTNPVAVYKDEQGKAHKFSAVCPHMKGVLNWNDTEKSWDCPVHGSRFSCDGVCVEGPSKANLKPM DSFAQKEQRAQQAI* |
| Coding | >Ani_SJS72_1|g3854.t1 ATGTCCAGCCCCACCCATTGGATGAACACCTCTGGCGAGACGGACCCCGTCTGGGTTCACTCCATGCCGTATTCC AAGTATCCCAAGTTTCCATCGCTGAATGAGAACGTCGAAACGGATGTCTGCATTGTCGGCGCAGGCATTGCAGGT ATCTCCATTGCCTATGAACTGGTCAATCGCGGGAAGCGAGTTACCATGATCGAGGCCCGCAATGTCCTGTCCGGA GAAAGTGGCCGGACTAGTGGCCATTTGTCCAATGCCTTGGATGATGGATATGTTGAGATCCAGAAGAAGCATGGT ACGCAGGGTGCTAAAGCAGCCGCCGAGAGTCATACCTGGGCGCTCAAGCGAGTCGGGGAGATTTCCAGATCGCTT GGAATCGAGTGCGAGTACCGTACACTTCCGGGCTACGAAATCTCCCAGTACCCCCGCGGCGACGCAAACCATGAA AAGGAGGTCGCTAGCCTGAAGAAGGAAGCGGAGCTGGCGAAGCAGCTTGGTCTTCCTGCCTCCTACCGCGATGGG CTCACCGTCAAGGGATGGGACGGCAGCATCGACCAGCGGGACGGTGCCATTTTTGCAGACCAGGCCACATTCCAT CCGACCAAGTATTTTGTCGGGGTACTCGACTGGCTGCAGAAGCAGCCAAACTTTCAATGCTATGCGCACACGCGC ATGATGTCATCCAGCGAGAGCGGCCTGGTGCAAGTGACAACCGCAGATGGCTACACCATTACGGCCAAAGATATG GTTGAGGCGACATGTGTGCCGCTCCAGAAATTGAGTGTCATTGCCGAGATGGAGTTCATGCGAACGTACTGCATT GCCATTCGTGTTCCTAAGGGCTCGATCGAGGACTGCCTACTCTATGACGAGGCAGAAGCGTACAAGTACGTCCGA TTCACCGAGTGCGACGAGAAGGACGACTACCTGGTAGTCGGAGGATGTGATCATAAGGTCGGCCAGGAGCACACT AGTGGTCGCTTCGAGGAACTCGAGACCTGGGTCCGTGAACGCTTCACCAAGGCTGGGACAGTCGACTATAAATGG AGCGGACAGATTTTTGAGCCTGTCGATTACATGGCATTCATCGGAAAGAACCAGGGCTTGAACCATACCTATATT GTCACAGGAGACAGTGGCAATGGTCTCACACACGGCGTACTTGCTGGCAGACTCATTGCGGACGAGATTACGGGC ATTGACAATCCATGGGCCAGCCTGTATAACCCCCATCGATTGTCCAGCATCGTCAAATCACTACCCAGTATGCTG CAGCATGATGTTCAGATTAACGCCCAGTACAAGCGCTGGATGAAGTCCGACATTAAGGATATCGAGGATCTGGCC GTCGGCTCCGGAGGCGTCATCAAGGAGGGTCTGACGAACCCCGTGGCCGTGTACAAAGACGAGCAAGGTAAGGCG CATAAGTTCAGCGCTGTCTGTCCGCATATGAAGGGGGTGTTGAACTGGAACGACACCGAGAAGAGCTGGGATTGT CCCGTACATGGTAGTCGGTTCAGCTGCGATGGGGTTTGCGTGGAGGGACCGTCCAAGGCGAACTTGAAGCCCATG GACTCGTTCGCTCAGAAGGAGCAGCGGGCGCAGCAAGCCATTTAG |
| Transcript | >Ani_SJS72_1|g3854.t1 ATGTCCAGCCCCACCCATTGGATGAACACCTCTGGCGAGACGGACCCCGTCTGGGTTCACTCCATGCCGTATTCC AAGTATCCCAAGTTTCCATCGCTGAATGAGAACGTCGAAACGGATGTCTGCATTGTCGGCGCAGGCATTGCAGGT ATCTCCATTGCCTATGAACTGGTCAATCGCGGGAAGCGAGTTACCATGATCGAGGCCCGCAATGTCCTGTCCGGA GAAAGTGGCCGGACTAGTGGCCATTTGTCCAATGCCTTGGATGATGGATATGTTGAGATCCAGAAGAAGCATGGT ACGCAGGGTGCTAAAGCAGCCGCCGAGAGTCATACCTGGGCGCTCAAGCGAGTCGGGGAGATTTCCAGATCGCTT GGAATCGAGTGCGAGTACCGTACACTTCCGGGCTACGAAATCTCCCAGTACCCCCGCGGCGACGCAAACCATGAA AAGGAGGTCGCTAGCCTGAAGAAGGAAGCGGAGCTGGCGAAGCAGCTTGGTCTTCCTGCCTCCTACCGCGATGGG CTCACCGTCAAGGGATGGGACGGCAGCATCGACCAGCGGGACGGTGCCATTTTTGCAGACCAGGCCACATTCCAT CCGACCAAGTATTTTGTCGGGGTACTCGACTGGCTGCAGAAGCAGCCAAACTTTCAATGCTATGCGCACACGCGC ATGATGTCATCCAGCGAGAGCGGCCTGGTGCAAGTGACAACCGCAGATGGCTACACCATTACGGCCAAAGATATG GTTGAGGCGACATGTGTGCCGCTCCAGAAATTGAGTGTCATTGCCGAGATGGAGTTCATGCGAACGTACTGCATT GCCATTCGTGTTCCTAAGGGCTCGATCGAGGACTGCCTACTCTATGACGAGGCAGAAGCGTACAAGTACGTCCGA TTCACCGAGTGCGACGAGAAGGACGACTACCTGGTAGTCGGAGGATGTGATCATAAGGTCGGCCAGGAGCACACT AGTGGTCGCTTCGAGGAACTCGAGACCTGGGTCCGTGAACGCTTCACCAAGGCTGGGACAGTCGACTATAAATGG AGCGGACAGATTTTTGAGCCTGTCGATTACATGGCATTCATCGGAAAGAACCAGGGCTTGAACCATACCTATATT GTCACAGGAGACAGTGGCAATGGTCTCACACACGGCGTACTTGCTGGCAGACTCATTGCGGACGAGATTACGGGC ATTGACAATCCATGGGCCAGCCTGTATAACCCCCATCGATTGTCCAGCATCGTCAAATCACTACCCAGTATGCTG CAGCATGATGTTCAGATTAACGCCCAGTACAAGCGCTGGATGAAGTCCGACATTAAGGATATCGAGGATCTGGCC GTCGGCTCCGGAGGCGTCATCAAGGAGGGTCTGACGAACCCCGTGGCCGTGTACAAAGACGAGCAAGGTAAGGCG CATAAGTTCAGCGCTGTCTGTCCGCATATGAAGGGGGTGTTGAACTGGAACGACACCGAGAAGAGCTGGGATTGT CCCGTACATGGTAGTCGGTTCAGCTGCGATGGGGTTTGCGTGGAGGGACCGTCCAAGGCGAACTTGAAGCCCATG GACTCGTTCGCTCAGAAGGAGCAGCGGGCGCAGCAAGCCATTTAG |
| Gene | >Ani_SJS72_1|g3854.t1 ATGTCCAGCCCCACCCATTGGATGAACACCTCTGGCGAGACGGACCCCGTCTGGGTTCACTCCATGCCGTATTCC AAGTATCCCAAGTTTCCATCGCTGAATGAGAACGTCGAAACGGATGTCTGCATTGTCGGCGCAGGCATTGCAGGT ATCTCCATTGCCTATGAACTGGTCAATCGCGGGAAGCGAGTTACCATGATCGAGGCCCGCAATGTCCTGTCCGGA GAAAGTGGCCGGACTAGTGGCCATTTGTCCAATGCCTTGGATGATGGATATGTTGAGATCCAGAAGAAGCATGGT ACGCAGGGTGCTAAAGCAGCCGCCGAGAGTCATACCTGGGCGCTCAAGCGAGTCGGGGAGATTTCCAGATCGCTT GGAATCGAGTGCGAGTACCGTACACTTCCGGGCTACGAAATCTCCCAGTACCCCCGCGGCGACGCAAACCATGAA AAGGAGGTCGCTAGCCTGAAGAAGGAAGCGGAGCTGGCGAAGCAGCTTGGTCTTCCTGCCTCCTACCGCGATGGG CTCACCGTCAAGGGATGGGACGGCAGCATCGACCAGCGGGACGGTGCCATTTTTGCAGACCAGGCCACATTCCAT CCGACCAAGTATTTTGTCGGGGTACTCGACTGGCTGCAGAAGCAGCCAAACTTTCAATGCTATGCGCACACGCGC ATGATGTCATCCAGCGAGAGCGGCCTGGTGCAAGTGACAACCGCAGATGGCTACACCATTACGGCCAAAGATATG GTTGAGGCGACATGTGTGCCGCTCCAGAAATTGAGTGTCATTGCCGAGATGGAGTTCATGCGAACGTACTGCATT GCCATTCGTGTTCCTAAGGGCTCGATCGAGGACTGCCTACTCTATGACGAGGCAGAAGCGTACAAGTACGTCCGA TTCACCGAGTGCGACGAGAAGGACGACTACCTGGTAGTCGGAGGATGTGATCATAAGGTCGGCCAGGAGCACACT AGTGGTCGCTTCGAGGAACTCGAGACCTGGGTCCGTGAACGCTTCACCAAGGCTGGGACAGTCGACTATAAATGG AGCGGACAGATTTTTGAGCCTGTCGATTACATGGCATTCATCGGAAAGAACCAGGGCTTGAACCATACCTATATT GTCACAGGAGACAGTGGCAATGGTCTCACACACGGCGTACTTGCTGGCAGACTCATTGCGGACGAGATTACGGGC ATTGACAATCCATGGGCCAGCCTGTATAACCCCCATCGATTGTCCAGCATCGTCAAATCACTACCCAGTATGCTG CAGCATGATGTTCAGATTAACGCCCAGTACAAGCGCTGGATGAAGTCCGACATTAAGGATATCGAGGATCTGGCC GTCGGCTCCGGAGGCGTCATCAAGGAGGGTCTGACGAACCCCGTGGCCGTGTACAAAGACGAGCAAGGTAAGGCG CATAAGTTCAGCGCTGTCTGTCCGCATATGAAGGGGGTGTTGAACTGGAACGACACCGAGAAGAGCTGGGATTGT CCCGTACATGGTAGTCGGTTCAGCTGCGATGGGGTTTGCGTGGAGGGACCGTCCAAGGCGAACTTGAAGCCCATG GACTCGTTCGCTCAGAAGGAGCAGCGGGCGCAGCAAGCCATTTAG |