© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g3836.t1 |
| Gene name | |
| Location | scaffold_022:178999..180763 |
| Strand | + |
| Gene length (bp) | 1764 |
| Transcript length (bp) | 1587 |
| Coding sequence length (bp) | 1587 |
| Protein length (aa) | 529 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 7.9E-30 | 90 | 463 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.5E-10 | 77 | 263 |
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 2.9E-06 | 97 | 252 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 69 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 79 | 101 | 22 |
| 2 | 111 | 133 | 22 |
| 3 | 145 | 162 | 17 |
| 4 | 166 | 188 | 22 |
| 5 | 201 | 223 | 22 |
| 6 | 233 | 252 | 19 |
| 7 | 305 | 327 | 22 |
| 8 | 342 | 364 | 22 |
| 9 | 385 | 407 | 22 |
| 10 | 412 | 429 | 17 |
| 11 | 436 | 458 | 22 |
| 12 | 481 | 503 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g3836.t1 MAPIENELHIVPCDYKSANGGGTTAGSSKANHVNRTQDMDEYLLKNDLEFTPDGQYVRWAKGNKNHPRNWSATRK VYDIGLIFLLDLFVTATSTAGTSAASEAQSEYNIGNTLCTFCFVTLFLMGQVVGAIVFPPWSECFGRKKLYFISS TGSAVCCLIIGLVHSLVAVVICRIVGGFLSAIPYTVGSGSNEDMFNSRSRIWTTFLWTIASNVGLLIGPIISILV VEILHWRWVFYIYTIILAVMSAFFLLIRESRPALLLAKEVSRIRHETGHDSLQPLNHDHSPDLRTFVKVSLFRPL QLFFGELLIFTMAMMIAFSFALVYIFTEALQPIYESMGFTPSAAALPFLAVGVGVCFSTLTRILDFRIIDAKHAA SEPVKPEDKLTGLAIGAPAFAIGLWWFAWTIPPQAENIHWIVPTLSLVFIGYALNEFDTVLYGYLADSYLSYSAS GTAAVQLVRAGMSGAFPLFTRQMFDGLGANVAASLLAALATVFCSVPLLFVFYGERIRAKSQFAKHSLEVQEQFV KQG* |
| Coding | >Ani_SJS72_1|g3836.t1 ATGGCCCCCATTGAGAACGAACTACATATAGTCCCCTGTGACTATAAATCGGCAAACGGAGGGGGTACTACAGCA GGTTCATCAAAAGCGAACCACGTCAATCGGACTCAGGACATGGATGAGTACCTGCTGAAAAATGACCTGGAGTTC ACGCCAGATGGACAATATGTCCGGTGGGCAAAGGGCAACAAGAATCATCCCCGCAACTGGAGCGCAACCCGCAAG GTGTACGACATTGGGTTGATCTTTCTGCTGGATCTCTTTGTGACCGCTACGAGTACTGCTGGGACATCGGCGGCT TCAGAGGCCCAAAGTGAATACAATATTGGAAATACTTTGTGCACCTTTTGCTTTGTGACATTATTTCTCATGGGG CAGGTTGTCGGCGCGATTGTCTTCCCTCCGTGGTCCGAGTGCTTTGGACGCAAAAAGCTATATTTTATCAGCAGC ACCGGTAGTGCGGTGTGTTGCCTAATAATTGGGCTTGTTCATTCATTAGTCGCCGTGGTCATCTGTCGCATCGTC GGTGGCTTCTTGAGTGCTATTCCATACACTGTTGGCAGCGGCAGCAATGAGGACATGTTCAACTCGCGATCTCGC ATCTGGACCACTTTCCTCTGGACCATTGCCTCGAACGTCGGTCTTCTAATCGGTCCAATCATCAGCATCCTTGTT GTTGAAATCCTACACTGGCGCTGGGTGTTTTACATATATACGATCATCCTGGCTGTCATGAGCGCGTTCTTCCTG CTCATCCGGGAATCACGGCCCGCCCTGCTCCTGGCCAAAGAGGTCTCACGCATTCGCCACGAAACGGGCCACGAC AGCCTACAGCCTCTTAATCACGATCACTCCCCTGACCTCCGCACCTTCGTCAAGGTCTCGCTCTTCCGACCCCTG CAGCTCTTCTTCGGTGAGCTTCTCATCTTCACGATGGCCATGATGATCGCGTTCTCCTTCGCGTTGGTCTATATC TTCACCGAGGCACTCCAGCCCATCTACGAGAGCATGGGTTTCACTCCATCAGCTGCAGCTCTTCCTTTCCTCGCC GTGGGTGTTGGTGTTTGTTTCAGCACTCTCACTCGCATCCTCGACTTTCGAATCATCGACGCCAAACACGCAGCC TCCGAGCCCGTCAAACCAGAAGATAAACTGACCGGACTGGCCATTGGGGCTCCTGCCTTTGCGATTGGGCTCTGG TGGTTCGCATGGACGATTCCCCCGCAGGCAGAAAATATCCACTGGATTGTCCCTACGCTTTCCCTGGTGTTCATT GGATATGCGTTGAATGAATTCGACACCGTTCTATATGGCTATCTGGCCGATAGTTATCTGAGCTATTCAGCGAGT GGCACAGCGGCGGTGCAGTTGGTTCGAGCAGGGATGTCGGGGGCATTTCCGCTCTTCACGCGGCAGATGTTTGAC GGGCTGGGAGCGAATGTCGCAGCTTCATTGTTGGCGGCATTGGCAACAGTGTTCTGTAGTGTGCCGTTATTGTTT GTGTTTTATGGGGAGCGGATCCGCGCGAAGAGTCAGTTCGCGAAGCATAGTTTGGAGGTTCAGGAGCAATTTGTC AAGCAGGGTTGA |
| Transcript | >Ani_SJS72_1|g3836.t1 ATGGCCCCCATTGAGAACGAACTACATATAGTCCCCTGTGACTATAAATCGGCAAACGGAGGGGGTACTACAGCA GGTTCATCAAAAGCGAACCACGTCAATCGGACTCAGGACATGGATGAGTACCTGCTGAAAAATGACCTGGAGTTC ACGCCAGATGGACAATATGTCCGGTGGGCAAAGGGCAACAAGAATCATCCCCGCAACTGGAGCGCAACCCGCAAG GTGTACGACATTGGGTTGATCTTTCTGCTGGATCTCTTTGTGACCGCTACGAGTACTGCTGGGACATCGGCGGCT TCAGAGGCCCAAAGTGAATACAATATTGGAAATACTTTGTGCACCTTTTGCTTTGTGACATTATTTCTCATGGGG CAGGTTGTCGGCGCGATTGTCTTCCCTCCGTGGTCCGAGTGCTTTGGACGCAAAAAGCTATATTTTATCAGCAGC ACCGGTAGTGCGGTGTGTTGCCTAATAATTGGGCTTGTTCATTCATTAGTCGCCGTGGTCATCTGTCGCATCGTC GGTGGCTTCTTGAGTGCTATTCCATACACTGTTGGCAGCGGCAGCAATGAGGACATGTTCAACTCGCGATCTCGC ATCTGGACCACTTTCCTCTGGACCATTGCCTCGAACGTCGGTCTTCTAATCGGTCCAATCATCAGCATCCTTGTT GTTGAAATCCTACACTGGCGCTGGGTGTTTTACATATATACGATCATCCTGGCTGTCATGAGCGCGTTCTTCCTG CTCATCCGGGAATCACGGCCCGCCCTGCTCCTGGCCAAAGAGGTCTCACGCATTCGCCACGAAACGGGCCACGAC AGCCTACAGCCTCTTAATCACGATCACTCCCCTGACCTCCGCACCTTCGTCAAGGTCTCGCTCTTCCGACCCCTG CAGCTCTTCTTCGGTGAGCTTCTCATCTTCACGATGGCCATGATGATCGCGTTCTCCTTCGCGTTGGTCTATATC TTCACCGAGGCACTCCAGCCCATCTACGAGAGCATGGGTTTCACTCCATCAGCTGCAGCTCTTCCTTTCCTCGCC GTGGGTGTTGGTGTTTGTTTCAGCACTCTCACTCGCATCCTCGACTTTCGAATCATCGACGCCAAACACGCAGCC TCCGAGCCCGTCAAACCAGAAGATAAACTGACCGGACTGGCCATTGGGGCTCCTGCCTTTGCGATTGGGCTCTGG TGGTTCGCATGGACGATTCCCCCGCAGGCAGAAAATATCCACTGGATTGTCCCTACGCTTTCCCTGGTGTTCATT GGATATGCGTTGAATGAATTCGACACCGTTCTATATGGCTATCTGGCCGATAGTTATCTGAGCTATTCAGCGAGT GGCACAGCGGCGGTGCAGTTGGTTCGAGCAGGGATGTCGGGGGCATTTCCGCTCTTCACGCGGCAGATGTTTGAC GGGCTGGGAGCGAATGTCGCAGCTTCATTGTTGGCGGCATTGGCAACAGTGTTCTGTAGTGTGCCGTTATTGTTT GTGTTTTATGGGGAGCGGATCCGCGCGAAGAGTCAGTTCGCGAAGCATAGTTTGGAGGTTCAGGAGCAATTTGTC AAGCAGGGTTGA |
| Gene | >Ani_SJS72_1|g3836.t1 ATGGCCCCCATTGAGAACGAACTACATATAGTCCCCTGTGACTATAAATCGGCAAACGGAGGGGGTACTACAGCA GGTTCATCAAAAGCGAACCACGTCAATCGGACTCAGGACATGGATGAGTACCTGCTGAAAAATGACCTGGAGTTC ACGCCAGATGGACAATATGTCCGGTGGGCAAAGGGCAACAAGAATCATCCCCGCAACTGGAGCGCAACCCGCAAG GTGTACGACATTGGGTTGATCTTTCTGCTGGATCTCTTTGTGTATGTGTTGACACCTCAATGTTGATGCACTGCT AACAGACATAGGACCGCTACGAGTACTGCTGGGGTATGTTCCTCATCCAACAGTGTGGCCTTTCTAATGACCATA GACATCGGCGGCTTCAGAGGCCCAAAGTGAATACAATATTGGAAATACTTTGTGCACCTTTTGCTTTGTGACATT GTACGTTCTTCCAGACTTCTGATAGTACCTGACTGACCTCATAGATTTCTCATGGGGCAGGTTGTCGGCGCGATT GTCTTCCCTCCGTGGTCCGAGTGCTTTGGACGCAAAAAGCTATATTTTATCAGCAGCACCGGTAGTGCGGTGTGT TGCCTAATAATTGGGCTTGTTCATTCATTAGTCGCCGTGGTCATCTGTCGCATCGTCGGTGGCTTCTTGAGTGCT ATTCCATACACTGTTGGCAGCGGCAGCAATGAGGACATGTTCAACTCGCGATCTCGCATCTGGACCACTTTCCTC TGGACCATTGCCTCGAACGTCGGTCTTCTAATCGGTCCAATCATCAGCATCCTTGTTGTTGAAATCCTACACTGG TACGTCTTCTGATCCGTTTCGCGAGACAAGCTCTGACTGAGTAGGCGCTGGGTGTTTTACATATATACGATCATC CTGGCTGTCATGAGCGCGTTCTTCCTGCTCATCCGGGAATCACGGCCCGCCCTGCTCCTGGCCAAAGAGGTCTCA CGCATTCGCCACGAAACGGGCCACGACAGCCTACAGCCTCTTAATCACGATCACTCCCCTGACCTCCGCACCTTC GTCAAGGTCTCGCTCTTCCGACCCCTGCAGCTCTTCTTCGGTGAGCTTCTCATCTTCACGATGGCCATGATGATC GCGTTCTCCTTCGCGTTGGTCTATATCTTCACCGAGGCACTCCAGCCCATCTACGAGAGCATGGGTTTCACTCCA TCAGCTGCAGCTCTTCCTTTCCTCGCCGTGGGTGTTGGTGTTTGTTTCAGCACTCTCACTCGCATCCTCGACTTT CGAATCATCGACGCCAAACACGCAGCCTCCGAGCCCGTCAAACCAGAAGATAAACTGACCGGACTGGCCATTGGG GCTCCTGCCTTTGCGATTGGGCTCTGGTGGTTCGCATGGACGATTCCCCCGCAGGCAGAAAATATCCACTGGATT GTCCCTACGCTTTCCCTGGTGTTCATTGGATATGCGTTGAATGAATTCGACACCGTTCTATATGGCTATCTGGCC GATAGTTATCTGAGCTATTCAGCGAGTGGCACAGCGGCGGTGCAGTTGGTTCGAGCAGGGATGTCGGGGGCATTT CCGCTCTTCACGCGGCAGATGTTTGACGGGCTGGGAGCGAATGTCGCAGCTTCATTGTTGGCGGCATTGGCAACA GTGTTCTGTAGTGTGCCGTTATTGTTTGTGTTTTATGGGGAGCGGATCCGCGCGAAGAGTCAGTTCGCGAAGCAT AGTTTGGAGGTTCAGGAGCAATTTGTCAAGCAGGGTTGA |