© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g3832.t1 |
| Gene name | |
| Location | scaffold_022:169810..171482 |
| Strand | + |
| Gene length (bp) | 1672 |
| Transcript length (bp) | 1473 |
| Coding sequence length (bp) | 1473 |
| Protein length (aa) | 491 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 7.8E-40 | 57 | 422 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 49 | 66 | 17 |
| 2 | 120 | 139 | 19 |
| 3 | 144 | 166 | 22 |
| 4 | 179 | 201 | 22 |
| 5 | 211 | 233 | 22 |
| 6 | 282 | 304 | 22 |
| 7 | 319 | 338 | 19 |
| 8 | 345 | 364 | 19 |
| 9 | 374 | 396 | 22 |
| 10 | 432 | 454 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g3832.t1 MTIDQMDPVVERKSLEKPIEQASPEETAIGDIDDVVLDPAKEKKLLMKLDMAFVPIIMLTYLSCFLDRSNIGNVK VAGMPEDIHASDSEYSTAVSIFYATYVLLEAPWAVAMKKLTPRNILTGLCIIWSITTVFTGFIHNVASLYATRLI LGGCEAGLFPCLNLYLTMVYRREEQAKRVSYLMSCAAISGAVGGLLAYALLHMDGVGGKAGWRWVYIIEGLFSLV CAILIWFGLPNDPSNAYFLTAEEKYMMRVRNEQRRKYMGSEHFSWEEMRIALRDPKLMFSALTQFCQDILLYGFS TFLPTILGSLGYNSLMSNVLTVPVYIWAAIVFIAVAFCADRFGRFSIFILVTNIFGIVGYILLLTVSNDAVKYFA TYLCGVAVYTGVGLNVAWLNVNVAPQYRRALAIGLQQTVGNCAGIVAGQVYRTSPYVLGNAFSLGALVVSQVIVA LHAVYLRRENKVKEEILAGEKEDTRRVKTGDGEVEFRYHT* |
| Coding | >Ani_SJS72_1|g3832.t1 ATGACTATCGATCAGATGGATCCCGTAGTTGAGCGAAAATCGCTCGAGAAGCCAATTGAGCAGGCGTCTCCTGAA GAGACTGCCATTGGGGATATTGACGATGTCGTCCTCGACCCAGCCAAGGAGAAGAAGCTTCTCATGAAGCTCGAT ATGGCCTTTGTGCCCATTATCATGTTGACCTACCTGTCTTGCTTCCTCGACCGTAGTAACATCGGTAATGTCAAG GTAGCTGGCATGCCTGAAGACATCCACGCCTCCGACAGCGAGTATTCTACCGCCGTGTCCATCTTCTACGCTACC TACGTGCTATTAGAGGCACCTTGGGCCGTGGCAATGAAGAAGCTCACTCCGCGGAATATCCTCACCGGTCTATGC ATCATCTGGTCAATTACCACCGTGTTTACGGGCTTCATCCACAATGTCGCCTCGCTGTACGCAACACGGTTGATC CTCGGTGGCTGCGAAGCCGGACTCTTCCCGTGTCTAAACCTGTATTTGACCATGGTGTATCGTCGAGAAGAGCAA GCAAAGCGCGTCTCATACCTGATGAGCTGCGCCGCCATCTCCGGTGCCGTGGGAGGTCTACTCGCATATGCATTG TTGCACATGGACGGTGTAGGCGGCAAAGCCGGCTGGAGATGGGTCTACATCATCGAAGGACTCTTCAGTCTAGTG TGCGCCATCCTCATCTGGTTCGGTCTTCCCAACGACCCCAGCAACGCCTACTTCCTCACCGCCGAAGAGAAATAC ATGATGCGCGTGCGCAACGAACAACGCCGGAAGTACATGGGCAGTGAGCACTTCAGCTGGGAGGAGATGCGCATT GCTCTTCGTGATCCCAAGCTCATGTTCTCTGCCCTCACGCAGTTCTGTCAGGATATTCTCCTCTACGGATTCAGT ACTTTCCTTCCTACTATCTTGGGGAGTCTGGGGTATAATAGTCTCATGAGTAATGTGCTCACGGTACCGGTGTAT ATCTGGGCTGCGATCGTGTTTATTGCTGTCGCGTTTTGCGCGGATCGCTTTGGGAGGTTTTCTATCTTCATCCTA GTCACCAACATCTTCGGTATCGTCGGCTACATCCTCCTCCTGACTGTGTCCAACGACGCCGTCAAATACTTCGCT ACTTACCTCTGCGGTGTGGCTGTCTACACCGGCGTCGGACTGAACGTCGCCTGGTTGAACGTCAACGTGGCGCCT CAGTACCGTCGTGCACTTGCCATTGGTCTCCAGCAGACAGTGGGTAACTGCGCCGGTATTGTAGCGGGCCAGGTT TATCGCACGTCGCCGTATGTACTAGGGAATGCCTTCTCGTTGGGGGCATTGGTGGTGTCGCAGGTAATTGTCGCG CTTCATGCGGTGTATCTGAGACGGGAGAATAAGGTGAAAGAGGAGATTCTGGCGGGCGAAAAGGAGGATACGCGA AGAGTGAAGACAGGTGATGGCGAGGTGGAGTTCAGATACCATACTTAA |
| Transcript | >Ani_SJS72_1|g3832.t1 ATGACTATCGATCAGATGGATCCCGTAGTTGAGCGAAAATCGCTCGAGAAGCCAATTGAGCAGGCGTCTCCTGAA GAGACTGCCATTGGGGATATTGACGATGTCGTCCTCGACCCAGCCAAGGAGAAGAAGCTTCTCATGAAGCTCGAT ATGGCCTTTGTGCCCATTATCATGTTGACCTACCTGTCTTGCTTCCTCGACCGTAGTAACATCGGTAATGTCAAG GTAGCTGGCATGCCTGAAGACATCCACGCCTCCGACAGCGAGTATTCTACCGCCGTGTCCATCTTCTACGCTACC TACGTGCTATTAGAGGCACCTTGGGCCGTGGCAATGAAGAAGCTCACTCCGCGGAATATCCTCACCGGTCTATGC ATCATCTGGTCAATTACCACCGTGTTTACGGGCTTCATCCACAATGTCGCCTCGCTGTACGCAACACGGTTGATC CTCGGTGGCTGCGAAGCCGGACTCTTCCCGTGTCTAAACCTGTATTTGACCATGGTGTATCGTCGAGAAGAGCAA GCAAAGCGCGTCTCATACCTGATGAGCTGCGCCGCCATCTCCGGTGCCGTGGGAGGTCTACTCGCATATGCATTG TTGCACATGGACGGTGTAGGCGGCAAAGCCGGCTGGAGATGGGTCTACATCATCGAAGGACTCTTCAGTCTAGTG TGCGCCATCCTCATCTGGTTCGGTCTTCCCAACGACCCCAGCAACGCCTACTTCCTCACCGCCGAAGAGAAATAC ATGATGCGCGTGCGCAACGAACAACGCCGGAAGTACATGGGCAGTGAGCACTTCAGCTGGGAGGAGATGCGCATT GCTCTTCGTGATCCCAAGCTCATGTTCTCTGCCCTCACGCAGTTCTGTCAGGATATTCTCCTCTACGGATTCAGT ACTTTCCTTCCTACTATCTTGGGGAGTCTGGGGTATAATAGTCTCATGAGTAATGTGCTCACGGTACCGGTGTAT ATCTGGGCTGCGATCGTGTTTATTGCTGTCGCGTTTTGCGCGGATCGCTTTGGGAGGTTTTCTATCTTCATCCTA GTCACCAACATCTTCGGTATCGTCGGCTACATCCTCCTCCTGACTGTGTCCAACGACGCCGTCAAATACTTCGCT ACTTACCTCTGCGGTGTGGCTGTCTACACCGGCGTCGGACTGAACGTCGCCTGGTTGAACGTCAACGTGGCGCCT CAGTACCGTCGTGCACTTGCCATTGGTCTCCAGCAGACAGTGGGTAACTGCGCCGGTATTGTAGCGGGCCAGGTT TATCGCACGTCGCCGTATGTACTAGGGAATGCCTTCTCGTTGGGGGCATTGGTGGTGTCGCAGGTAATTGTCGCG CTTCATGCGGTGTATCTGAGACGGGAGAATAAGGTGAAAGAGGAGATTCTGGCGGGCGAAAAGGAGGATACGCGA AGAGTGAAGACAGGTGATGGCGAGGTGGAGTTCAGATACCATACTTAA |
| Gene | >Ani_SJS72_1|g3832.t1 ATGACTATCGATCAGATGGATCCCGTAGTTGAGCGAAAATCGCTCGAGAAGCCAATTGAGCAGGCGTCTCCTGAA GAGACTGCCATTGGGGATATTGACGATGTCGTCCTCGACCCAGCCAAGGAGAAGAAGCTTCTCATGAAGCTCGAT ATGGCCTTTGTGCCCATTATCATGTTGACCTACCTGTCTTGCTTCCTCGACCGTAGTAACATCGGTGAATATCCC CCAATGCACGTTCCCCACGAGGATGGATATCGCTAATGATTTTTATTTCAGGTAATGTCAAGGTAGCTGGCATGC CTGAAGACATCCACGCCTCCGACAGCGAGTATTCTACCGCCGTGTCCATCTTCTACGCTACCTACGTGCTATTAG AGGCACCTTGGGCCGTGGCAATGAAGAAGCTCACTCCGCGGAATATCCTCACCGGTCTATGCATCATCTGGTCAA TTACCACCGTGTTTACGGGCTTCATCCACAATGTCGCCTCGCTGTACGCAACACGGTTGATCCTCGGTGGCTGCG AAGCCGGACTCTTCCCGTGTCTAAACCTGTATTTGACCATGGTGTATCGTCGAGAAGAGCAAGCAAAGCGCGTCT CATACCTGATGAGCTGCGCCGCCATCTCCGGTGCCGTGGGAGGTCTACTCGCATATGCATTGTTGCACATGGACG GTGTAGGCGGCAAAGCCGGCTGGAGGTAAGCTACCCGTGTACCCCTCCCTATCACCCCATCAACACTTTCTAACA AAAACCACAAAGATGGGTCTACATCATCGAAGGACTCTTCAGTCTAGTGTGCGCCATCCTCATCTGGTTCGGTCT TCCCAACGACCCCAGCAACGCCTACTTCCTCACCGCCGAAGAGAAATACATGATGCGCGTGCGCAACGAACAACG CCGGAAGTACATGGGCAGTGAGCACTTCAGCTGGGAGGAGATGCGCATTGCTCTTCGTGATCCCAAGCTCATGTT CTCTGCCCTCACGCAGTTCTGTCAGGATATTCTCCTCTACGGATTCAGTACTTTCCTTCCTACTATCTTGGGGAG TCTGGGGTATAATAGTCTCATGAGTAATGTGCTCACGGTACCGGTGTATATCTGGGCTGCGATCGTGTTTATTGC TGTCGCGTTTTGCGCGGATCGCTTTGGGAGGTTTTCTATCGTAAGTTTTCCCCTTAAACCCTACCAACTTCTGAC TATGTGGTGACGGATGTGGGGGTGCTAACAATGGGAACAGTTCATCCTAGTCACCAACATCTTCGGTATCGTCGG CTACATCCTCCTCCTGACTGTGTCCAACGACGCCGTCAAATACTTCGCTACTTACCTCTGCGGTGTGGCTGTCTA CACCGGCGTCGGACTGAACGTCGCCTGGTTGAACGTCAACGTGGCGCCTCAGTACCGTCGTGCACTTGCCATTGG TCTCCAGCAGACAGTGGGTAACTGCGCCGGTATTGTAGCGGGCCAGGTTTATCGCACGTCGCCGTATGTACTAGG GAATGCCTTCTCGTTGGGGGCATTGGTGGTGTCGCAGGTAATTGTCGCGCTTCATGCGGTGTATCTGAGACGGGA GAATAAGGTGAAAGAGGAGATTCTGGCGGGCGAAAAGGAGGATACGCGAAGAGTGAAGACAGGTGATGGCGAGGT GGAGTTCAGATACCATACTTAA |