© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g3820.t1 |
| Gene name | |
| Location | scaffold_022:134984..136509 |
| Strand | + |
| Gene length (bp) | 1525 |
| Transcript length (bp) | 1227 |
| Coding sequence length (bp) | 1227 |
| Protein length (aa) | 409 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 24 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 37 | 59 | 22 |
| 2 | 72 | 91 | 19 |
| 3 | 120 | 142 | 22 |
| 4 | 149 | 171 | 22 |
| 5 | 191 | 213 | 22 |
| 6 | 225 | 247 | 22 |
| 7 | 262 | 284 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g3820.t1 MELFRRLPHIHYALNLREIGIRAIYPATQHAPDHVDEIAIATIYLMVIMILAVLIRLAFRLHMLRSLEWDDGTIS LALIFAVAQCAVILVGTEHGLGKRKLSLNDTEVQILEKVLYSSNILYVLALNLAKISVLLLLNRLAVNRWHKKIL FWTSVLVGIWTVPVFFTLAFQCGVPEPWDASNGHCIDIFAFWAGISPIDIITELVICILPIYIVKPVQVIFGKKV TVVVAFFIRIFVVITTIIRLIFMRYSKPYPSTDMNDAAFATTITTECVLCVSIMTACIPCLKPFLDAFDSGMLNV SLHKRIGGGSNSNSYGNTYALTSMTKGVKESATRSRYLEDEIEGLGTSAAAFAVTSPGQPLGRRDSTLVIQRTDQ WSVRCEYVGPKDGSVGDETEQSERNVARCEHSL* |
| Coding | >Ani_SJS72_1|g3820.t1 ATGGAACTTTTTCGACGGCTCCCGCACATTCATTATGCTCTTAACCTCCGAGAGATTGGGATACGCGCAATCTAC CCGGCGACGCAACATGCGCCGGACCATGTCGACGAAATAGCCATTGCCACTATCTACTTGATGGTAATAATGATA CTTGCTGTTCTGATACGACTCGCCTTCCGTCTTCATATGCTCCGCTCACTGGAGTGGGATGATGGAACAATATCG CTTGCACTGATCTTCGCTGTTGCACAATGTGCTGTCATTCTTGTTGGAACGGAGCACGGGTTGGGCAAACGAAAA TTGAGTCTTAATGACACGGAAGTCCAAATACTAGAGAAGGTTCTCTACTCGTCGAACATTCTATACGTTCTTGCT CTTAACTTGGCGAAGATCTCAGTACTGCTGCTTCTGAACAGATTGGCTGTGAATAGGTGGCATAAGAAAATCTTA TTCTGGACTTCTGTTCTGGTCGGTATCTGGACTGTGCCGGTGTTTTTCACTCTTGCATTCCAATGTGGAGTACCT GAACCTTGGGATGCTAGTAATGGTCATTGCATAGATATTTTCGCCTTCTGGGCCGGCATCTCCCCTATCGACATA ATAACGGAACTGGTCATCTGCATCCTACCCATCTACATCGTGAAGCCAGTCCAAGTCATCTTCGGGAAGAAAGTC ACCGTTGTGGTTGCATTCTTCATCCGCATCTTCGTTGTTATAACCACCATCATCCGCCTCATCTTTATGCGCTAC TCCAAGCCCTATCCCTCCACGGACATGAACGACGCTGCGTTCGCAACAACCATTACAACAGAATGCGTCCTCTGC GTCAGCATCATGACAGCCTGCATTCCATGCCTGAAGCCGTTTCTGGACGCCTTTGACAGCGGCATGCTGAATGTA TCCTTACATAAGCGCATAGGCGGAGGCAGCAATAGCAACTCATATGGCAACACCTATGCGTTGACGAGTATGACC AAGGGTGTTAAAGAATCAGCCACTAGGTCACGGTATTTGGAGGATGAGATCGAGGGCTTGGGCACTTCTGCTGCC GCGTTTGCTGTTACATCTCCGGGTCAGCCATTGGGTAGGAGGGACTCTACGTTGGTGATTCAAAGAACAGATCAG TGGAGCGTGAGGTGCGAGTACGTTGGTCCGAAGGATGGATCTGTTGGGGATGAGACCGAGCAGTCGGAGAGGAAT GTGGCTAGGTGTGAACATTCTTTGTAG |
| Transcript | >Ani_SJS72_1|g3820.t1 ATGGAACTTTTTCGACGGCTCCCGCACATTCATTATGCTCTTAACCTCCGAGAGATTGGGATACGCGCAATCTAC CCGGCGACGCAACATGCGCCGGACCATGTCGACGAAATAGCCATTGCCACTATCTACTTGATGGTAATAATGATA CTTGCTGTTCTGATACGACTCGCCTTCCGTCTTCATATGCTCCGCTCACTGGAGTGGGATGATGGAACAATATCG CTTGCACTGATCTTCGCTGTTGCACAATGTGCTGTCATTCTTGTTGGAACGGAGCACGGGTTGGGCAAACGAAAA TTGAGTCTTAATGACACGGAAGTCCAAATACTAGAGAAGGTTCTCTACTCGTCGAACATTCTATACGTTCTTGCT CTTAACTTGGCGAAGATCTCAGTACTGCTGCTTCTGAACAGATTGGCTGTGAATAGGTGGCATAAGAAAATCTTA TTCTGGACTTCTGTTCTGGTCGGTATCTGGACTGTGCCGGTGTTTTTCACTCTTGCATTCCAATGTGGAGTACCT GAACCTTGGGATGCTAGTAATGGTCATTGCATAGATATTTTCGCCTTCTGGGCCGGCATCTCCCCTATCGACATA ATAACGGAACTGGTCATCTGCATCCTACCCATCTACATCGTGAAGCCAGTCCAAGTCATCTTCGGGAAGAAAGTC ACCGTTGTGGTTGCATTCTTCATCCGCATCTTCGTTGTTATAACCACCATCATCCGCCTCATCTTTATGCGCTAC TCCAAGCCCTATCCCTCCACGGACATGAACGACGCTGCGTTCGCAACAACCATTACAACAGAATGCGTCCTCTGC GTCAGCATCATGACAGCCTGCATTCCATGCCTGAAGCCGTTTCTGGACGCCTTTGACAGCGGCATGCTGAATGTA TCCTTACATAAGCGCATAGGCGGAGGCAGCAATAGCAACTCATATGGCAACACCTATGCGTTGACGAGTATGACC AAGGGTGTTAAAGAATCAGCCACTAGGTCACGGTATTTGGAGGATGAGATCGAGGGCTTGGGCACTTCTGCTGCC GCGTTTGCTGTTACATCTCCGGGTCAGCCATTGGGTAGGAGGGACTCTACGTTGGTGATTCAAAGAACAGATCAG TGGAGCGTGAGGTGCGAGTACGTTGGTCCGAAGGATGGATCTGTTGGGGATGAGACCGAGCAGTCGGAGAGGAAT GTGGCTAGGTGTGAACATTCTTTGTAG |
| Gene | >Ani_SJS72_1|g3820.t1 ATGGAACTTTTTCGACGGCTCCCGCACATTCATTATGCTCTTAACCTCCGAGAGATTGGGATACGCGCAATCTAC CCGGCGACGCAACATGCGCCGGACCATGTCGACGAAATAGCCATTGCCACTATCTACTTGATGGTAATAATGATA CTTGCTGTTCTGATACGACTCGCCTTCCGTCTTCATATGCTCCGCTCACTGGAGTGGGATGATGGAACAATATCG CTTGCACTGGTATGTTTGCCGCTCCAGCGTTCTAAGACAATAGGTGTATTGATTCATTAATGCGGATCTTTCAAG ACAGCAGATCTTCGCTGTTGCACAATGTGCTGTCATTCTTGTTGGAACGGAGCACGGGTTGGGCAAACGAAAATT GAGTCTTAATGACACGGAAGTCCAAATACTAGAGAAGGTGAGTCTCAGCCAGTGGTTGATGGCACAGGCTTACTG ATATCACGATGTCAATCAGGTTCTCTACTCGTCGAACATTCTATACGTTCTTGCTCTTAACTTGGCGAAGATCTC AGTACTGCTGCTTCTGAACAGATTGGCTGTGAATAGGTGGCATAAGAAAATCTTATTCTGGACTTCTGTTCTGGT CGGTATCTGGACTGTGCCGGTGTTTTTCACTCTTGCATTCCAATGTGGAGTACCTGAACCTTGGGATGCTAGTAA TGGTCATTGCATAGATATTGTGAGTTAGCAGATCCTTCTCCCCATCACCCCAAATTTCACATACAGTCTTATGCA TTCGAGAGATTCATATACTTCCAGTTCTCTACAACAACACTGACAGATACTGACGCAGTTCGCCTTCTGGGCCGG CATCTCCCCTATCGACATAATAACGGAACTGGTCATCTGCATCCTACCCATCTACATCGTGAAGCCAGTCCAAGT CATCTTCGGGAAGAAAGTCACCGTTGTGGTTGCATTCTTCATCCGCATCTTGTAGGTCCAATTTGGGCTTCATAA TAGACATTCGACTAACATGAGATTGGCCAGCGTTGTTATAACCACCATCATCCGCCTCATCTTTATGCGCTACTC CAAGCCCTATCCCTCCACGGACATGAACGACGCTGCGTTCGCAACAACCATTACAACAGAATGCGTCCTCTGCGT CAGCATCATGACAGCCTGCATTCCATGCCTGAAGCCGTTTCTGGACGCCTTTGACAGCGGCATGCTGAATGTATC CTTACATAAGCGCATAGGCGGAGGCAGCAATAGCAACTCATATGGCAACACCTATGCGTTGACGAGTATGACCAA GGGTGTTAAAGAATCAGCCACTAGGTCACGGTATTTGGAGGATGAGATCGAGGGCTTGGGCACTTCTGCTGCCGC GTTTGCTGTTACATCTCCGGGTCAGCCATTGGGTAGGAGGGACTCTACGTTGGTGATTCAAAGAACAGATCAGTG GAGCGTGAGGTGCGAGTACGTTGGTCCGAAGGATGGATCTGTTGGGGATGAGACCGAGCAGTCGGAGAGGAATGT GGCTAGGTGTGAACATTCTTTGTAG |