Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g3808.t1
Gene name
Location	scaffold_022:102361..103564
Strand	+
Gene length (bp)	1203
Transcript length (bp)	1056
Coding sequence length (bp)	1056
Protein length (aa)	352

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 43	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	15	34	19
2	85	107	22
3	127	149	22
4	206	228	22
5	243	265	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g3808.t1 MAVSPLDVPNRGPEFVKVTAVLTCIAFVLVVCRLTWKGYVQGRFAVDDGIIAFSMGMQIVNTVMGDLACHYAFGR HKADIVRTGGNVVLALKYFWLFQIFYKLVLCLNKLSFLTFYLRVFPNRIFRIICWITIALVLASTFGFVIATIFQ CLPVRASWYKHIPKKCVQNAPFRWSWAGYNTAMDIWVCLMPLPVLAQLQLDRIRKIGVILVFCMGLFVCVTSIIR MWAMEKSTTTTDPTWGSFDALLWSAIEASTGIICACLPFLKHPIQKVLPGLFGSLSTGSRKSRSRTRPSYRMSRL GSRSGNGTRDVDADIGGDGDDTESIGSQGPIAKNQIIVKTGISMHSEAAYP*
Coding	>Ani_SJS72_1\|g3808.t1 ATGGCGGTTAGTCCGCTGGATGTTCCGAATAGAGGCCCCGAATTCGTCAAAGTAACCGCCGTCTTGACATGCATT GCGTTCGTCCTGGTGGTCTGTCGCCTGACATGGAAGGGCTATGTCCAAGGCCGATTCGCCGTAGACGATGGGATC ATTGCATTCTCAATGGGTATGCAGATCGTCAACACCGTTATGGGTGATTTAGCCTGCCACTACGCCTTTGGCCGA CACAAAGCCGATATCGTCAGAACGGGCGGTAACGTCGTCCTTGCTCTGAAGTATTTCTGGCTCTTCCAGATCTTC TACAAACTCGTCCTATGCCTCAACAAACTTTCCTTTCTCACCTTCTACCTCCGGGTCTTTCCCAACCGCATCTTC CGCATAATCTGTTGGATTACCATCGCTCTCGTTCTCGCTAGCACCTTTGGCTTCGTCATAGCCACCATCTTCCAA TGCCTCCCCGTTCGCGCCAGCTGGTATAAGCACATACCCAAGAAGTGTGTTCAAAATGCCCCATTTCGTTGGTCC TGGGCGGGCTATAATACTGCAATGGACATTTGGGTGTGTCTGATGCCACTGCCGGTGTTGGCGCAGCTACAGCTT GATCGGATCAGGAAAATCGGAGTCATACTGGTATTCTGTATGGGGTTGTTTGTCTGTGTGACGAGTATCATTCGC ATGTGGGCGATGGAGAAAAGTACGACCACTACGGATCCGACTTGGGGATCGTTTGATGCGTTGTTGTGGAGTGCC ATTGAGGCCAGTACGGGAATCATTTGTGCTTGCTTGCCGTTCCTAAAACACCCCATTCAGAAGGTCTTGCCTGGC CTGTTTGGGTCATTGTCGACTGGGTCCAGGAAGAGTCGGAGTCGGACGAGGCCGAGTTATCGGATGAGTCGATTG GGGTCGCGGTCGGGGAACGGCACGCGGGATGTTGACGCTGATATTGGCGGAGATGGAGATGATACAGAGAGCATT GGAAGCCAGGGTCCTATTGCGAAGAACCAGATTATCGTGAAGACGGGCATTTCCATGCACAGTGAAGCGGCATAT CCATGA
Transcript	>Ani_SJS72_1\|g3808.t1 ATGGCGGTTAGTCCGCTGGATGTTCCGAATAGAGGCCCCGAATTCGTCAAAGTAACCGCCGTCTTGACATGCATT GCGTTCGTCCTGGTGGTCTGTCGCCTGACATGGAAGGGCTATGTCCAAGGCCGATTCGCCGTAGACGATGGGATC ATTGCATTCTCAATGGGTATGCAGATCGTCAACACCGTTATGGGTGATTTAGCCTGCCACTACGCCTTTGGCCGA CACAAAGCCGATATCGTCAGAACGGGCGGTAACGTCGTCCTTGCTCTGAAGTATTTCTGGCTCTTCCAGATCTTC TACAAACTCGTCCTATGCCTCAACAAACTTTCCTTTCTCACCTTCTACCTCCGGGTCTTTCCCAACCGCATCTTC CGCATAATCTGTTGGATTACCATCGCTCTCGTTCTCGCTAGCACCTTTGGCTTCGTCATAGCCACCATCTTCCAA TGCCTCCCCGTTCGCGCCAGCTGGTATAAGCACATACCCAAGAAGTGTGTTCAAAATGCCCCATTTCGTTGGTCC TGGGCGGGCTATAATACTGCAATGGACATTTGGGTGTGTCTGATGCCACTGCCGGTGTTGGCGCAGCTACAGCTT GATCGGATCAGGAAAATCGGAGTCATACTGGTATTCTGTATGGGGTTGTTTGTCTGTGTGACGAGTATCATTCGC ATGTGGGCGATGGAGAAAAGTACGACCACTACGGATCCGACTTGGGGATCGTTTGATGCGTTGTTGTGGAGTGCC ATTGAGGCCAGTACGGGAATCATTTGTGCTTGCTTGCCGTTCCTAAAACACCCCATTCAGAAGGTCTTGCCTGGC CTGTTTGGGTCATTGTCGACTGGGTCCAGGAAGAGTCGGAGTCGGACGAGGCCGAGTTATCGGATGAGTCGATTG GGGTCGCGGTCGGGGAACGGCACGCGGGATGTTGACGCTGATATTGGCGGAGATGGAGATGATACAGAGAGCATT GGAAGCCAGGGTCCTATTGCGAAGAACCAGATTATCGTGAAGACGGGCATTTCCATGCACAGTGAAGCGGCATAT CCATGA
Gene	>Ani_SJS72_1\|g3808.t1 ATGGCGGTTAGTCCGCTGGATGTTCCGAATAGAGGCCCCGAATTCGTCAAAGTAACCGCCGTCTTGACATGCATT GCGTTCGTCCTGGTGGTCTGTCGCCTGACATGGAAGGGCTATGTCCAAGGCCGATTCGCCGTAGACGATGGGATC ATTGCATTCTCAATGGTAGGCTATCCTGAGTCCCAATACTAAACGTTTACTCACCCACAGCCAGGGTATGCAGAT CGTCAACACCGTTATGGGTGATTTAGGTATGATTTTCCAGAATGTAGACGCCATCAATACTAAACTCTGTCCAGC CTGCCACTACGCCTTTGGCCGACACAAAGCCGATATCGTCAGAACGGGCGGTAACGTCGTCCTTGCTCTGAAGGT GCGAGATGTGTTCACTGAATCCATCACACTTAGCTAACTTGCGGCAAGTATTTCTGGCTCTTCCAGATCTTCTAC AAACTCGTCCTATGCCTCAACAAACTTTCCTTTCTCACCTTCTACCTCCGGGTCTTTCCCAACCGCATCTTCCGC ATAATCTGTTGGATTACCATCGCTCTCGTTCTCGCTAGCACCTTTGGCTTCGTCATAGCCACCATCTTCCAATGC CTCCCCGTTCGCGCCAGCTGGTATAAGCACATACCCAAGAAGTGTGTTCAAAATGCCCCATTTCGTTGGTCCTGG GCGGGCTATAATACTGCAATGGACATTTGGGTGTGTCTGATGCCACTGCCGGTGTTGGCGCAGCTACAGCTTGAT CGGATCAGGAAAATCGGAGTCATACTGGTATTCTGTATGGGGTTGTTTGTCTGTGTGACGAGTATCATTCGCATG TGGGCGATGGAGAAAAGTACGACCACTACGGATCCGACTTGGGGATCGTTTGATGCGTTGTTGTGGAGTGCCATT GAGGCCAGTACGGGAATCATTTGTGCTTGCTTGCCGTTCCTAAAACACCCCATTCAGAAGGTCTTGCCTGGCCTG TTTGGGTCATTGTCGACTGGGTCCAGGAAGAGTCGGAGTCGGACGAGGCCGAGTTATCGGATGAGTCGATTGGGG TCGCGGTCGGGGAACGGCACGCGGGATGTTGACGCTGATATTGGCGGAGATGGAGATGATACAGAGAGCATTGGA AGCCAGGGTCCTATTGCGAAGAACCAGATTATCGTGAAGACGGGCATTTCCATGCACAGTGAAGCGGCATATCCA TGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail