© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g3744.t1 |
| Gene name | |
| Location | scaffold_021:305705..307677 |
| Strand | + |
| Gene length (bp) | 1972 |
| Transcript length (bp) | 801 |
| Coding sequence length (bp) | 801 |
| Protein length (aa) | 267 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04828 | GFA | Glutathione-dependent formaldehyde-activating enzyme | 9.3E-25 | 28 | 116 |
| PF00285 | Citrate_synt | Citrate synthase, C-terminal domain | 2.6E-07 | 136 | 249 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0046912 | acyltransferase activity, acyl groups converted into alkyl on transfer | Yes |
| GO:0016846 | carbon-sulfur lyase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016746 | acyltransferase activity | No |
| GO:0016829 | lyase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016740 | transferase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 240 | 259 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g3744.t1 MPLSGHCLCKAVTYTVDIDAPLLVGYDHCDDCQRQSGSTYSLVAVVPKDKLTVNGPLKKWSGTGSSGNAVHRLFC SECGSPIAHDPDAAPEIIALKAGTLDTEIKKALKPDTEIWTVGKLPFCQEHLAKPFKHMPESLLLFGGHSLEQLS EIDLEDVLHRLVSGSYPTMPHMDGLSHKLTEAMLAVPDDVQRTVWTHPTSSPLPLIVAGISACLASHPDMITASH DANMFRKSPEDTDRVMIRTVAAYAVLIHLLFIIYDGRNQPT* |
| Coding | >Ani_SJS72_1|g3744.t1 ATGCCTTTGTCCGGCCACTGCCTGTGCAAGGCTGTCACTTACACCGTGGACATTGATGCACCCCTCCTCGTGGGG TACGATCATTGTGACGACTGCCAGCGTCAGAGCGGGTCAACCTACTCTCTAGTTGCTGTTGTCCCCAAGGACAAA CTGACTGTCAATGGACCTCTCAAGAAGTGGTCTGGAACGGGATCCTCCGGCAATGCGGTGCACCGTCTATTCTGT TCGGAATGTGGCTCTCCCATCGCGCACGATCCCGACGCGGCCCCAGAAATTATCGCTCTGAAAGCTGGTACTTTG GACACGGAGATCAAGAAAGCCCTCAAGCCAGACACCGAGATCTGGACCGTTGGCAAGCTTCCTTTCTGCCAGGAG CACCTGGCTAAGCCTTTCAAGCATATGCCTGAGAGCTTGCTTCTTTTCGGCGGCCACAGTTTGGAGCAACTCAGT GAAATCGACCTCGAGGACGTACTGCATCGCCTTGTTTCGGGGTCTTATCCGACGATGCCGCACATGGATGGTTTG AGCCACAAATTGACAGAAGCCATGCTAGCCGTGCCAGATGATGTGCAGAGAACGGTTTGGACCCATCCCACCTCG TCGCCGCTGCCGCTCATAGTTGCTGGCATTTCTGCTTGTCTAGCCAGCCACCCTGACATGATTACGGCATCGCAT GATGCTAATATGTTTCGAAAAAGTCCTGAAGATACCGACCGTGTAATGATCCGAACTGTGGCAGCCTATGCTGTG TTGATTCATCTCCTTTTCATCATCTATGATGGCAGGAACCAGCCCACATAA |
| Transcript | >Ani_SJS72_1|g3744.t1 ATGCCTTTGTCCGGCCACTGCCTGTGCAAGGCTGTCACTTACACCGTGGACATTGATGCACCCCTCCTCGTGGGG TACGATCATTGTGACGACTGCCAGCGTCAGAGCGGGTCAACCTACTCTCTAGTTGCTGTTGTCCCCAAGGACAAA CTGACTGTCAATGGACCTCTCAAGAAGTGGTCTGGAACGGGATCCTCCGGCAATGCGGTGCACCGTCTATTCTGT TCGGAATGTGGCTCTCCCATCGCGCACGATCCCGACGCGGCCCCAGAAATTATCGCTCTGAAAGCTGGTACTTTG GACACGGAGATCAAGAAAGCCCTCAAGCCAGACACCGAGATCTGGACCGTTGGCAAGCTTCCTTTCTGCCAGGAG CACCTGGCTAAGCCTTTCAAGCATATGCCTGAGAGCTTGCTTCTTTTCGGCGGCCACAGTTTGGAGCAACTCAGT GAAATCGACCTCGAGGACGTACTGCATCGCCTTGTTTCGGGGTCTTATCCGACGATGCCGCACATGGATGGTTTG AGCCACAAATTGACAGAAGCCATGCTAGCCGTGCCAGATGATGTGCAGAGAACGGTTTGGACCCATCCCACCTCG TCGCCGCTGCCGCTCATAGTTGCTGGCATTTCTGCTTGTCTAGCCAGCCACCCTGACATGATTACGGCATCGCAT GATGCTAATATGTTTCGAAAAAGTCCTGAAGATACCGACCGTGTAATGATCCGAACTGTGGCAGCCTATGCTGTG TTGATTCATCTCCTTTTCATCATCTATGATGGCAGGAACCAGCCCACATAA |
| Gene | >Ani_SJS72_1|g3744.t1 ATGCCTTTGTCCGGCCACTGCCTGTGCAAGGCTGTCACTTACACCGTGGACATTGATGCACCCCTCCTCGTGGGG TACGATCATTGTGACGACTGCCAGCGTCAGAGCGGGTCAACCTACTGTAGGTGCTCTCCTTGGCTTACCCCCACG GTTCGAACTAAGCATGGCCGTACCATGGTTATTAACCTTCCCAACAGCTCTAGTTGCTGTTGTCCCCAAGGACAA ACTGACTGTCAATGGACCTCTCAAGAAGTGGTCTGGAACGGGATCCTCCGGCAATGCGGTGCACCGTCTATTCTG TTCGGAATGTGGCTCTCCCATCGCGCACGATCCCGACGCGGCCCCAGAAATTATCGCTCTGAAAGCTGGTACTTT GGACACGGAGATCAAGAAAGCCCTCAAGCCAGTATGTGCTGCGATCCCGTGGAATAGGCCCCATGCTGATCTGAA TCCCTTCTAGGACACCGAGATCTGGACCGTTGGCAAGCTTCCTTTCTGCCAGGAGCACCTGGCTAAGCCTTTCAA GCATATGCCTGAGTAAGCAAACACCGAATGGAGGGTTCACAAGGCATGCTATGATATGACGAATATTATGCAATG TAGTTAATGATGTATTCACCTGAATCAACTATCGTTTCTTGGAATATTACTCATTTTGACCAATATTTTTTGATC GCCGAGAGGCATGTAGAGGGTCAGATATGGCTACCGATGTCAAGAGGCAGTGTTCAGCGGCGATTGGAAAAGACG TGCCACGGCGGATTGAACATGGTGACACCATAGCTAATTGCCATACACGCGAGAAATTTACTCCGCAAGAAGCCG AGTAAGCAGCACGAAATTTTGGGATTTTGCTGACGGTCGATACTTGGGAAGCAACATTGTCAAGCAACACAATCG AAAGTCTTGGAAATCCGAAACACTCTGCTACTGTGGACATCCGCTAATCACCGGGACATTATGCCGCAGTCTTAG GTGATCTTAAATTGAATGATGGTATCGCCTACATTGCGGTGCATCTATACAACAGAGCCCAACTAGCTAACCCGC TACGGAACATCGTCAATCCACTGTCCTCCGAGATACTTATGTCAAAGACACGCACACCGATGCGCAATATGAGAT CCCAATTCGAAGAAAGGCGGTCTCAGCCGTGGACTTCACGAAGATCAGAGCCACAGGAACGGGAACCGACCGCGC AGATCAGGTCGCGGGTGGCCTCAGGGTACATGACCTGGGGTGAGAAACACTACTGTTGTGGAGACGGCCATAAGT TTCTCGTGCGAGGTCCACTGCAGTGGCGGAACAATCTGACTATTCTAGGGATCTTGAAAGGAGCTTGCTTCTTTT CGGCGGCCACAGTTTGGAGCAACTCAGTGAAATCGACCTCGAGGACGTACTGCATCGCCTTGTTTCGGGGTCTTA TCCGACGATGCCGCACATGGATGGTTTGAGCCACAAATTGACAGAAGCCATGCTAGCCGTGCCAGATGATGTGCA GAGAACGGTTTGGACCCATCCGTAAGTAAATGTGATCTGCGCCTGCCATTGCTAACGGATTGGCTGTCTGGAAGC ACCTCGTCGCCGCTGCCGCTCATAGTTGCTGGCATTTCTGCTTGTCTAGCCAGCCACCCTGACATGATTACGGCA TCGCATGATGCTAATATGTTTCGAAAAAGTCCTGAAGATACCGACCGTGTAATGATCCGAACTGTGGCAGCCTAT GCTGTGGTATCTGGCCTCGCGAATAGTCACCGGAAGGGTCTACGGTTTACGCCGCCGACGAGGGGGAGATCATAC TATGAAAAGTCTTTTGTGAAGCAATTGTCTCGCAGTTGATTCATCTCCTTTTCATCATCTATGATGGCAGGGTAT GTTAAGAGTCCTGGATATGATACCTGATTAAGTTTAGGACAAGACTGGTCGAGGTGGATAACTACTAACTACCCG ACCGCAGAACCAGCCCACATAA |