Protein ID | Ani_SJS72_1|g3722.t1 |
Gene name | |
Location | scaffold_021:232016..233735 |
Strand | - |
Gene length (bp) | 1719 |
Transcript length (bp) | 1491 |
Coding sequence length (bp) | 1491 |
Protein length (aa) | 497 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00295 | Glyco_hydro_28 | Glycosyl hydrolases family 28 | 4.0E-100 | 170 | 493 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005975 | carbohydrate metabolic process | Yes |
GO:0004650 | polygalacturonase activity | Yes |
GO:0003824 | catalytic activity | No |
GO:0008152 | metabolic process | No |
GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
GO:0003674 | molecular_function | No |
GO:0071704 | organic substance metabolic process | No |
GO:0044238 | primary metabolic process | No |
GO:0016787 | hydrolase activity | No |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | No |
GO:0008150 | biological_process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 18 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g3722.t1 MMKRSALLASFLPLALGCDSAETHSCASAFSVSSAAAASFCATFTASTVTATTGVPDVFLSNCDYKTKHLSSACS CLGTADGSAPASTPAAPAVSSSSKVGKAPAVAATRTSAIPTTFHTTAVRVPLSTSAAAAVTSQAVLPAQSSVAGN GGTTCTVTEYASISSAVASCSNILLSNINAPASSTIDLTGLQTGAAVIFAGETTFGDTYDSDFDPIVISGTDVTI TGEEGHVINGNGEAYWDGEGSNGGQDKPDHFIVVKDMYNSKIENLNILNWPVHCFEIENTEYLTISGLILNNTAG DAANSKSDGDPAAHNTDGFDIKQSDFLTLSNSWVHNQDDCVAVTSGSSIVVDNLYCYGGHGLSIGSIGGKSNNTV DGVTFSNSQVINSENGCRIKSNADTTGEVYNVKYENITLSGISDYGIDIQQDYENGGATGDPTNGVKIENISFVN VKGTMSDGKDYYILCGDGSCSNFVFTDVDITGGSDDSCNYPSSGCP* |
Coding | >Ani_SJS72_1|g3722.t1 ATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGCCCTGGGGTGCGACAGCGCTGAGACTCACTCC TGTGCCTCTGCCTTTTCCGTCTCCTCTGCGGCCGCCGCTAGCTTCTGCGCCACCTTCACGGCGAGCACCGTGACT GCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTACAAGACCAAGCACCTCTCCAGTGCCTGCAGC TGCCTGGGCACCGCCGATGGATCTGCTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGCAAGGTA GGCAAGGCACCTGCTGTTGCAGCCACTCGCACCTCGGCGATCCCGACCACTTTCCACACCACTGCCGTTCGTGTG CCCCTGTCCACCTCGGCAGCGGCGGCTGTGACCTCCCAGGCTGTCCTCCCGGCGCAGAGCTCCGTGGCAGGCAAC GGAGGCACTACCTGCACAGTGACTGAGTACGCTTCGATCTCCTCTGCCGTCGCATCCTGCTCCAACATCCTCCTG TCCAACATCAACGCCCCTGCATCGAGCACCATCGATCTCACGGGTCTGCAGACCGGTGCGGCTGTCATCTTTGCT GGTGAAACCACCTTCGGTGACACCTACGACAGCGACTTCGACCCCATTGTCATCTCCGGTACCGACGTGACCATC ACCGGTGAGGAGGGACATGTCATCAACGGTAACGGTGAAGCCTACTGGGACGGCGAGGGATCCAACGGCGGACAG GACAAGCCCGACCACTTCATTGTCGTCAAGGACATGTACAACTCCAAGATCGAGAACCTCAACATCCTGAACTGG CCCGTCCACTGCTTCGAGATCGAGAACACCGAGTACCTGACCATCTCCGGCCTGATCCTCAACAACACCGCCGGT GACGCCGCCAACAGCAAGAGTGACGGCGACCCGGCCGCCCACAACACCGACGGCTTCGACATCAAGCAGAGCGAC TTCCTGACCCTCTCCAACTCCTGGGTGCACAACCAGGACGACTGTGTTGCCGTTACCAGCGGTAGCTCGATCGTC GTCGACAACCTCTACTGCTACGGTGGTCACGGTCTCTCCATCGGCTCCATCGGCGGCAAGAGCAACAACACCGTC GACGGCGTCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGAACGGCTGCCGCATCAAGTCTAATGCTGATACC ACTGGCGAGGTCTACAACGTCAAGTACGAAAACATCACTCTGTCCGGCATCAGCGACTACGGCATCGACATCCAG CAGGACTACGAGAACGGTGGTGCTACCGGTGACCCGACCAACGGCGTCAAGATCGAGAACATCTCTTTCGTCAAT GTCAAGGGTACTATGAGCGACGGCAAGGATTACTACATCCTCTGTGGTGATGGCAGCTGCTCTAACTTTGTCTTC ACTGATGTCGACATCACCGGTGGTAGCGATGATAGCTGCAACTACCCCTCTTCGGGATGCCCTTAA |
Transcript | >Ani_SJS72_1|g3722.t1 ATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGCCCTGGGGTGCGACAGCGCTGAGACTCACTCC TGTGCCTCTGCCTTTTCCGTCTCCTCTGCGGCCGCCGCTAGCTTCTGCGCCACCTTCACGGCGAGCACCGTGACT GCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTACAAGACCAAGCACCTCTCCAGTGCCTGCAGC TGCCTGGGCACCGCCGATGGATCTGCTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGCAAGGTA GGCAAGGCACCTGCTGTTGCAGCCACTCGCACCTCGGCGATCCCGACCACTTTCCACACCACTGCCGTTCGTGTG CCCCTGTCCACCTCGGCAGCGGCGGCTGTGACCTCCCAGGCTGTCCTCCCGGCGCAGAGCTCCGTGGCAGGCAAC GGAGGCACTACCTGCACAGTGACTGAGTACGCTTCGATCTCCTCTGCCGTCGCATCCTGCTCCAACATCCTCCTG TCCAACATCAACGCCCCTGCATCGAGCACCATCGATCTCACGGGTCTGCAGACCGGTGCGGCTGTCATCTTTGCT GGTGAAACCACCTTCGGTGACACCTACGACAGCGACTTCGACCCCATTGTCATCTCCGGTACCGACGTGACCATC ACCGGTGAGGAGGGACATGTCATCAACGGTAACGGTGAAGCCTACTGGGACGGCGAGGGATCCAACGGCGGACAG GACAAGCCCGACCACTTCATTGTCGTCAAGGACATGTACAACTCCAAGATCGAGAACCTCAACATCCTGAACTGG CCCGTCCACTGCTTCGAGATCGAGAACACCGAGTACCTGACCATCTCCGGCCTGATCCTCAACAACACCGCCGGT GACGCCGCCAACAGCAAGAGTGACGGCGACCCGGCCGCCCACAACACCGACGGCTTCGACATCAAGCAGAGCGAC TTCCTGACCCTCTCCAACTCCTGGGTGCACAACCAGGACGACTGTGTTGCCGTTACCAGCGGTAGCTCGATCGTC GTCGACAACCTCTACTGCTACGGTGGTCACGGTCTCTCCATCGGCTCCATCGGCGGCAAGAGCAACAACACCGTC GACGGCGTCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGAACGGCTGCCGCATCAAGTCTAATGCTGATACC ACTGGCGAGGTCTACAACGTCAAGTACGAAAACATCACTCTGTCCGGCATCAGCGACTACGGCATCGACATCCAG CAGGACTACGAGAACGGTGGTGCTACCGGTGACCCGACCAACGGCGTCAAGATCGAGAACATCTCTTTCGTCAAT GTCAAGGGTACTATGAGCGACGGCAAGGATTACTACATCCTCTGTGGTGATGGCAGCTGCTCTAACTTTGTCTTC ACTGATGTCGACATCACCGGTGGTAGCGATGATAGCTGCAACTACCCCTCTTCGGGATGCCCTTAA |
Gene | >Ani_SJS72_1|g3722.t1 ATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGCCCTGGGGTGCGACAGCGCTGAGACTCACTCC TGTGCCTCTGCCTTTTCCGTCTCCTCTGCGGCCGCCGCTAGCTTCTGCGCCACCTTCACGGCGAGCACCGTGACT GCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTACAAGACCAAGCACCTCTCCAGTGCCTGCAGC TGCCTGGGCACCGCCGATGGATCTGCTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGCAAGGTA GTGAGTTTACCATTTAGATGCATCATCACGCTTTGATTACTGATTCAGTCTAGGGCAAGGCACCTGCTGTTGCAG CCACTCGCACCTCGGCGATCCCGACCACTTTCCACACCACTGCCGTTCGTGTGCCCCTGTCCACCTCGGCAGCGG CGGCTGTGACCTCCCAGGCTGTCCTCCCGGCGCAGAGCTCCGTGGCAGGCAACGGAGGCACTACCTGCACAGTGA CTGAGTACGCTTCGATCTCCTCTGCCGTCGCATCCTGCTCCAACATCCTCCTGTCCAACATCAACGCCCCTGCAT CGAGCACCATCGATCTCACGGGTCTGCAGACCGGTGCGGCTGTCATCTTTGCTGGTGAAACCGTAAGTCATATCC TTCCTATATTAGGGCCAACCGCCATACTAACGGAGAGTCCGACAGACCTTCGGTGACACCTACGACAGCGACTTC GACCCCATTGTCATCTCCGGTACCGACGTGACCATCACCGGTGAGGAGGGACATGTCATCAACGGTAACGGTGAA GCCTACTGGGACGGCGAGGGATCCAACGGCGGACAGGACAAGTACGAGCCTACCACCACAGCCCTTTCATGAAGA ACCCTACTCATAGCTCCTACCAGGCCCGACCACTTCATTGTCGTCAAGGACATGTACAACTCCAAGATCGAGAAC CTCAACATCCTGAACTGGCCCGTCCACTGCTTCGAGATCGAGAACACCGAGTACCTGACCATCTCCGGCCTGATC CTCAACAACACCGCCGGTGACGCCGCCAACAGCAAGAGTGACGGCGACCCGGCCGCCCACAACACCGACGGCTTC GACATCAAGCAGAGCGACTTCCTGACCCTCTCCAACTCCTGGGTGCACAACCAGGACGACTGTGTTGCCGTTACC AGCGGTAGCTCGATCGTCGTCGACAACCTCTACTGCTACGGTGGTCACGGTCTCTCCATCGGCTCCATCGGCGGC AAGAGCAACAACACCGTCGACGGCGTCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGAACGGCTGCCGCATC AAGTCTAATGCTGATACCACTGGCGAGGTTAGTCCATCCTATCTTAACCATCAACATCTTATTATTCTAACCACC GAGCAAATACAGGTCTACAACGTCAAGTACGAAAACATCACTCTGTCCGGCATCAGCGACTACGGCATCGACATC CAGCAGGACTACGAGAACGGTGGTGCTACCGGTGACCCGACCAACGGCGTCAAGATCGAGAACATCTCTTTCGTC AATGTCAAGGGTACTATGAGCGACGGCAAGGATTACTACATCCTCTGTGGTGATGGCAGCTGCTCTAACTTTGTC TTCACTGATGTCGACATCACCGGTGGTAGCGATGATAGCTGCAACTACCCCTCTTCGGGATGCCCTTAA |