Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g3716.t1
Gene name
Locationscaffold_021:214128..215214
Strand+
Gene length (bp)1086
Transcript length (bp)897
Coding sequence length (bp)897
Protein length (aa) 299

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 69 0.5

Transmembrane Domains

Domain # Start End Length
1 39 61 22
2 68 90 22
3 114 136 22
4 149 171 22
5 181 203 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g3716.t1
MKLTSLTPTVTRYGYGKHIATIHSSEKLEMFLKLDFVSMIAYLLALGTVKVSFCLLYLQIFPGKGFRIACWTLLG
LLVAETIEETFVVIFQCSPIHKAWDASGNVKGQCLSLTAFYYISFGIRLATDLALFALPLPKVMRLNMTLGKRAG
LVMMFGLGVLVSITSIIRATYISNFSDDHTWTLVNTLNWSSVEVAVAIFIACIPSFKSLISFRFPALQRLLGLSS
KGDSTGRSKIYGTSTRRTNNGRSLMGHQSIKLNTVTGQSRADVEASRNGSEERIIGAHEGIHVTTDVSVNESD*
Coding >Ani_SJS72_1|g3716.t1
ATGAAGTTAACAAGTCTCACTCCCACAGTGACCCGATATGGCTACGGAAAGCACATTGCGACTATACATAGCTCG
GAGAAGCTGGAGATGTTTCTCAAGCTCGACTTTGTCAGCATGATTGCGTATCTTCTCGCCCTCGGCACCGTCAAG
GTTTCCTTCTGCCTCTTATACCTGCAGATCTTCCCTGGAAAGGGGTTTCGCATCGCTTGCTGGACTCTCCTGGGC
CTACTTGTCGCCGAAACAATCGAAGAAACATTCGTCGTGATCTTCCAATGCTCACCGATTCACAAGGCATGGGAT
GCCAGTGGCAACGTCAAAGGCCAGTGTCTGTCTCTTACGGCCTTCTACTACATCTCCTTCGGGATCCGCTTGGCT
ACTGATCTGGCGCTCTTCGCTCTCCCTCTTCCGAAAGTGATGCGATTAAATATGACGCTAGGCAAACGAGCCGGA
CTAGTGATGATGTTTGGATTGGGTGTTCTGGTCTCCATCACGAGTATAATTCGAGCGACGTATATAAGCAACTTC
TCTGACGACCACACCTGGACACTTGTTAACACTCTCAATTGGTCCAGTGTTGAAGTGGCTGTGGCCATCTTCATC
GCCTGCATCCCTTCTTTCAAATCGCTCATTAGCTTCCGATTCCCTGCTTTACAACGGCTACTCGGGCTTTCCAGC
AAGGGAGACTCGACCGGACGGTCGAAGATATATGGAACATCGACGCGTCGGACCAATAACGGGCGATCTCTCATG
GGTCACCAGAGTATCAAGCTTAATACTGTGACGGGGCAGAGCCGGGCCGATGTTGAGGCTAGTCGCAATGGCTCG
GAGGAGCGTATCATCGGGGCTCATGAAGGCATTCACGTTACCACCGATGTGAGTGTTAACGAAAGTGATTGA
Transcript >Ani_SJS72_1|g3716.t1
ATGAAGTTAACAAGTCTCACTCCCACAGTGACCCGATATGGCTACGGAAAGCACATTGCGACTATACATAGCTCG
GAGAAGCTGGAGATGTTTCTCAAGCTCGACTTTGTCAGCATGATTGCGTATCTTCTCGCCCTCGGCACCGTCAAG
GTTTCCTTCTGCCTCTTATACCTGCAGATCTTCCCTGGAAAGGGGTTTCGCATCGCTTGCTGGACTCTCCTGGGC
CTACTTGTCGCCGAAACAATCGAAGAAACATTCGTCGTGATCTTCCAATGCTCACCGATTCACAAGGCATGGGAT
GCCAGTGGCAACGTCAAAGGCCAGTGTCTGTCTCTTACGGCCTTCTACTACATCTCCTTCGGGATCCGCTTGGCT
ACTGATCTGGCGCTCTTCGCTCTCCCTCTTCCGAAAGTGATGCGATTAAATATGACGCTAGGCAAACGAGCCGGA
CTAGTGATGATGTTTGGATTGGGTGTTCTGGTCTCCATCACGAGTATAATTCGAGCGACGTATATAAGCAACTTC
TCTGACGACCACACCTGGACACTTGTTAACACTCTCAATTGGTCCAGTGTTGAAGTGGCTGTGGCCATCTTCATC
GCCTGCATCCCTTCTTTCAAATCGCTCATTAGCTTCCGATTCCCTGCTTTACAACGGCTACTCGGGCTTTCCAGC
AAGGGAGACTCGACCGGACGGTCGAAGATATATGGAACATCGACGCGTCGGACCAATAACGGGCGATCTCTCATG
GGTCACCAGAGTATCAAGCTTAATACTGTGACGGGGCAGAGCCGGGCCGATGTTGAGGCTAGTCGCAATGGCTCG
GAGGAGCGTATCATCGGGGCTCATGAAGGCATTCACGTTACCACCGATGTGAGTGTTAACGAAAGTGATTGA
Gene >Ani_SJS72_1|g3716.t1
ATGAAGTTAACAAGTCTCACTCCCACAGTGACCCGATATGGCTACGGAAAGCACATTGCGACTATACATAGCTCG
GAGAAGCTGGAGATGTTTCTCAAGGTTTGGGATATACTAATGAATGAGTCTGTCTATATGCTCATTCAATTCCAT
TGATTTACAGCTCGACTTTGTCAGCATGATTGCGTATCTTCTCGCCCTCGGCACCGTCAAGGTTTCCTTCTGCCT
CTTATACCTGCAGATCTTCCCTGGAAAGGGGTTTCGCATCGCTTGCTGGACTCTCCTGGGCCTACTTGTCGCCGA
AACAATCGAAGAAACATTCGTCGTGATCTTCCAATGCTCACCGATTCACAAGGCATGGGATGCCAGTGGCAACGT
CAAAGGCCAGTGTCTGTCTCTTACGGCCTTCTACTACATCTCCTTCGGGATCCGCTTGGCTACTGATCTGGCGCT
CTTCGCTCTCCCTCTTCCGAAAGTGATGCGATTAAATATGACGCTAGGCAAACGAGCCGGACTAGTGATGATGTT
TGGATTGGGTGTTCTGTACGCTGGTTCCCTCTTAGCTGAAGTTCACCTGAGAGCTACGAATAACCGCGAGTTCTA
GGGTCTCCATCACGAGTATAATTCGAGCGACGTATATAAGCAACTTCTCTGACGACCACACCTGTATGTTGCCTC
TCCCTTTGAACCCTTACGTGTGCTACGGCTAATAGGTCACCTACTACTTGAACAGGGACACTTGTTAACACTCTC
AATTGGTCCAGTGTTGAAGTGGCTGTGGCCATCTTCATCGCCTGCATCCCTTCTTTCAAATCGCTCATTAGCTTC
CGATTCCCTGCTTTACAACGGCTACTCGGGCTTTCCAGCAAGGGAGACTCGACCGGACGGTCGAAGATATATGGA
ACATCGACGCGTCGGACCAATAACGGGCGATCTCTCATGGGTCACCAGAGTATCAAGCTTAATACTGTGACGGGG
CAGAGCCGGGCCGATGTTGAGGCTAGTCGCAATGGCTCGGAGGAGCGTATCATCGGGGCTCATGAAGGCATTCAC
GTTACCACCGATGTGAGTGTTAACGAAAGTGATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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