Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g3705.t1
Gene name
Location	scaffold_021:168125..168834
Strand	-
Gene length (bp)	709
Transcript length (bp)	645
Coding sequence length (bp)	645
Protein length (aa)	215

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF14342	DUF4396	Domain of unknown function (DUF4396)	9.2E-47	76	211

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 34	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	79	101	22
2	111	133	22
3	140	162	22
4	182	204	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g3705.t1 MTLKTIHRTSSILRINPPTRLFSILSPAQACRSTQTPSCHKPTSDTGNTTSCSTTTGPPQSQNHLTFKFWTTKSA WKRASINTLRCLVGCTLGDFSALWILQTYYPHLGMGLIMGASMASGITTSIILETVLLRRGADQLSWPAAARTAM GMSMVSMLAMETAENLVDYHLTGGMVNIADPMFWTAAATSMAAGYLAPLPYNYFRLRKFGKACH*
Coding	>Ani_SJS72_1\|g3705.t1 ATGACTCTCAAAACGATTCATAGAACGAGTTCGATCCTTCGAATAAATCCTCCCACTCGCCTCTTCTCCATCCTC TCCCCAGCACAAGCCTGCCGATCCACCCAGACCCCAAGCTGTCACAAACCAACCTCAGACACCGGAAATACTACA TCATGTTCAACAACCACAGGACCACCACAGTCCCAAAATCATCTCACCTTCAAGTTCTGGACGACCAAGTCTGCC TGGAAGCGCGCCAGCATCAACACCCTCCGCTGCCTCGTCGGCTGCACACTGGGTGATTTCTCCGCTTTATGGATC CTCCAAACCTACTATCCCCATCTAGGAATGGGCCTCATAATGGGTGCCTCAATGGCCTCAGGAATAACCACCTCC ATCATCCTTGAGACCGTCCTTCTCCGCCGAGGCGCGGACCAACTCTCTTGGCCAGCGGCTGCCCGCACCGCCATG GGAATGAGCATGGTGTCGATGCTGGCCATGGAGACGGCGGAGAATCTGGTCGATTATCATCTCACGGGAGGAATG GTGAATATCGCTGACCCAATGTTTTGGACTGCTGCGGCTACGTCCATGGCGGCGGGTTATTTGGCGCCGTTGCCG TATAATTATTTTCGGCTGAGGAAGTTTGGGAAGGCTTGTCATTGA
Transcript	>Ani_SJS72_1\|g3705.t1 ATGACTCTCAAAACGATTCATAGAACGAGTTCGATCCTTCGAATAAATCCTCCCACTCGCCTCTTCTCCATCCTC TCCCCAGCACAAGCCTGCCGATCCACCCAGACCCCAAGCTGTCACAAACCAACCTCAGACACCGGAAATACTACA TCATGTTCAACAACCACAGGACCACCACAGTCCCAAAATCATCTCACCTTCAAGTTCTGGACGACCAAGTCTGCC TGGAAGCGCGCCAGCATCAACACCCTCCGCTGCCTCGTCGGCTGCACACTGGGTGATTTCTCCGCTTTATGGATC CTCCAAACCTACTATCCCCATCTAGGAATGGGCCTCATAATGGGTGCCTCAATGGCCTCAGGAATAACCACCTCC ATCATCCTTGAGACCGTCCTTCTCCGCCGAGGCGCGGACCAACTCTCTTGGCCAGCGGCTGCCCGCACCGCCATG GGAATGAGCATGGTGTCGATGCTGGCCATGGAGACGGCGGAGAATCTGGTCGATTATCATCTCACGGGAGGAATG GTGAATATCGCTGACCCAATGTTTTGGACTGCTGCGGCTACGTCCATGGCGGCGGGTTATTTGGCGCCGTTGCCG TATAATTATTTTCGGCTGAGGAAGTTTGGGAAGGCTTGTCATTGA
Gene	>Ani_SJS72_1\|g3705.t1 ATGACTCTCAAAACGATTCATAGAACGAGTTCGATCCTTCGAATAAATCCTCCCACTCGCCTCTTCTCCATCCTC TCCCCAGCACAAGCCTGCCGATCCACCCAGACCCCAAGCTGTCACAAACCAACCTCAGACACCGGAAATACTACA TCATGTTCAACAACCACAGGACCACCACAGTCCCAAAATCATCTCACCTTCAAGTTCTGGACGACCAAGTCTGCC TGGAAGCGCGCCAGCATCAACACCCTCCGCTGCCTCGTCGGCTGCACACTGGGTGATTTCTCCGCTTTATGGATC CTCCAAACCTACTATCCCCATCTAGGAATGGGCCTCATAATGGGTGCCTCAAGTACGTTCTCAAATCTCCTTCTA CAACTCAACCCTTCAGAACGTCTTTTTGACCAAGAGCACAGTGGCCTCAGGAATAACCACCTCCATCATCCTTGA GACCGTCCTTCTCCGCCGAGGCGCGGACCAACTCTCTTGGCCAGCGGCTGCCCGCACCGCCATGGGAATGAGCAT GGTGTCGATGCTGGCCATGGAGACGGCGGAGAATCTGGTCGATTATCATCTCACGGGAGGAATGGTGAATATCGC TGACCCAATGTTTTGGACTGCTGCGGCTACGTCCATGGCGGCGGGTTATTTGGCGCCGTTGCCGTATAATTATTT TCGGCTGAGGAAGTTTGGGAAGGCTTGTCATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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