© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g3688.t1 |
| Gene name | |
| Location | scaffold_021:114367..115275 |
| Strand | + |
| Gene length (bp) | 908 |
| Transcript length (bp) | 819 |
| Coding sequence length (bp) | 819 |
| Protein length (aa) | 273 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02656 | DUF202 | Domain of unknown function (DUF202) | 1.5E-22 | 129 | 230 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 45 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 139 | 161 | 22 |
| 2 | 205 | 222 | 17 |
| 3 | 243 | 265 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g3688.t1 MESSDLTAPYARQANVLSPTQRSSSHSSHREPHRMAAFETVTVPDQGQSQPVNEVTPIVSNSDTSRRNYHSTDGL RNRDSGSTNNNTVSRDPGQQNSQCDSEEPRGSWYSRLAEKYGSLELENKGSVARDHLALERTFLAWLRTSLAFAS IGIAVTQLFRLNSAGSNANSANMSAHMSPLLSSAAYDPTIGVTSASSRLRSIGKPLGTTFIGVAILILLVGFHRY FESQYWIIRGKFPASRGSVALTAFVAAALIVTAFVVILAISPGAVEV* |
| Coding | >Ani_SJS72_1|g3688.t1 ATGGAATCCTCTGATTTGACCGCGCCGTACGCCAGACAGGCCAACGTCTTATCTCCCACGCAACGATCTTCATCC CATTCGTCTCATCGTGAGCCACACCGCATGGCTGCCTTCGAAACGGTCACCGTGCCTGACCAGGGCCAATCGCAA CCAGTCAACGAGGTCACCCCCATCGTGAGCAACTCTGACACATCCCGGCGCAACTATCATTCGACCGACGGTCTA CGGAACAGGGACTCAGGATCAACAAACAACAACACGGTCTCACGGGATCCCGGTCAGCAGAACTCCCAGTGTGAT TCGGAAGAACCGCGCGGCTCGTGGTATAGCCGGCTGGCGGAGAAATATGGAAGTTTGGAATTAGAGAATAAAGGC AGCGTGGCCCGGGACCATCTTGCTTTGGAACGAACCTTTCTGGCATGGCTGCGGACATCGCTAGCCTTTGCGTCG ATTGGCATTGCGGTAACCCAATTATTCCGTCTGAATAGTGCTGGGTCCAACGCAAACAGCGCCAACATGTCGGCT CATATGTCTCCCCTTTTGTCATCCGCTGCGTATGATCCCACTATAGGGGTAACATCTGCCTCATCACGGCTTCGG AGCATCGGTAAGCCGTTAGGGACTACTTTCATTGGAGTTGCAATTTTGATCCTACTGGTTGGATTTCATCGCTAC TTTGAGAGTCAGTATTGGATAATCCGGGGCAAGTTTCCAGCTAGTCGTGGTAGTGTTGCTTTGACAGCATTTGTG GCTGCTGCTTTGATTGTTACTGCTTTTGTTGTGATCCTTGCTATTTCGCCCGGCGCGGTCGAAGTGTAA |
| Transcript | >Ani_SJS72_1|g3688.t1 ATGGAATCCTCTGATTTGACCGCGCCGTACGCCAGACAGGCCAACGTCTTATCTCCCACGCAACGATCTTCATCC CATTCGTCTCATCGTGAGCCACACCGCATGGCTGCCTTCGAAACGGTCACCGTGCCTGACCAGGGCCAATCGCAA CCAGTCAACGAGGTCACCCCCATCGTGAGCAACTCTGACACATCCCGGCGCAACTATCATTCGACCGACGGTCTA CGGAACAGGGACTCAGGATCAACAAACAACAACACGGTCTCACGGGATCCCGGTCAGCAGAACTCCCAGTGTGAT TCGGAAGAACCGCGCGGCTCGTGGTATAGCCGGCTGGCGGAGAAATATGGAAGTTTGGAATTAGAGAATAAAGGC AGCGTGGCCCGGGACCATCTTGCTTTGGAACGAACCTTTCTGGCATGGCTGCGGACATCGCTAGCCTTTGCGTCG ATTGGCATTGCGGTAACCCAATTATTCCGTCTGAATAGTGCTGGGTCCAACGCAAACAGCGCCAACATGTCGGCT CATATGTCTCCCCTTTTGTCATCCGCTGCGTATGATCCCACTATAGGGGTAACATCTGCCTCATCACGGCTTCGG AGCATCGGTAAGCCGTTAGGGACTACTTTCATTGGAGTTGCAATTTTGATCCTACTGGTTGGATTTCATCGCTAC TTTGAGAGTCAGTATTGGATAATCCGGGGCAAGTTTCCAGCTAGTCGTGGTAGTGTTGCTTTGACAGCATTTGTG GCTGCTGCTTTGATTGTTACTGCTTTTGTTGTGATCCTTGCTATTTCGCCCGGCGCGGTCGAAGTGTAA |
| Gene | >Ani_SJS72_1|g3688.t1 ATGGAATCCTCTGATTTGACCGCGCCGTACGCCAGACAGGCCAACGTCTTATCTCCCACGCAACGATCTTCATCC CATTCGTCTCATCGTGAGCCACACCGCATGGCTGCCTTCGAAACGGTCACCGTGCCTGACCAGGGCCAATCGCAA CCAGTCAACGAGGTCACCCCCATCGTGAGCAACTCTGACACATCCCGGCGCAACTATCATTCGACCGACGGTCTA CGGAACAGGGACTCAGGATCAACAAACAACAACACGGTCTCACGGGATCCCGGTCAGCAGAACTCCCAGTGTGAT TCGGAAGAACCGCGCGGCTCGTGGTATAGCCGGCTGGCGGAGAAATATGGAAGTTTGGAATTAGAGAATAAAGGC AGCGTGGCCCGGGACCATCTTGCTTTGGGTATGTTTCGCCTGCTGTTGCTTTTTTTGCTTTTTTCTTTTCTCGTC CGTATACGACCCAGCTAAACGGATCCCCTTGGATACCTCTAGAACGAACCTTTCTGGCATGGCTGCGGACATCGC TAGCCTTTGCGTCGATTGGCATTGCGGTAACCCAATTATTCCGTCTGAATAGTGCTGGGTCCAACGCAAACAGCG CCAACATGTCGGCTCATATGTCTCCCCTTTTGTCATCCGCTGCGTATGATCCCACTATAGGGGTAACATCTGCCT CATCACGGCTTCGGAGCATCGGTAAGCCGTTAGGGACTACTTTCATTGGAGTTGCAATTTTGATCCTACTGGTTG GATTTCATCGCTACTTTGAGAGTCAGTATTGGATAATCCGGGGCAAGTTTCCAGCTAGTCGTGGTAGTGTTGCTT TGACAGCATTTGTGGCTGCTGCTTTGATTGTTACTGCTTTTGTTGTGATCCTTGCTATTTCGCCCGGCGCGGTCG AAGTGTAA |