© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g3668.t1 |
| Gene name | |
| Location | scaffold_021:42166..44714 |
| Strand | - |
| Gene length (bp) | 2548 |
| Transcript length (bp) | 1500 |
| Coding sequence length (bp) | 1500 |
| Protein length (aa) | 500 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 1.4E-54 | 33 | 474 |
| PF00324 | AA_permease | Amino acid permease | 8.9E-18 | 47 | 483 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 51 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 33 | 55 | 22 |
| 2 | 65 | 87 | 22 |
| 3 | 99 | 121 | 22 |
| 4 | 125 | 147 | 22 |
| 5 | 159 | 181 | 22 |
| 6 | 185 | 207 | 22 |
| 7 | 228 | 250 | 22 |
| 8 | 265 | 287 | 22 |
| 9 | 314 | 336 | 22 |
| 10 | 364 | 386 | 22 |
| 11 | 391 | 413 | 22 |
| 12 | 433 | 455 | 22 |
| 13 | 468 | 485 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g3668.t1 MEEMKVARDGPEDDVQLAEMGHKPELQRNFSTLSMLGLAFAVLNSWTALSASLSLSLPSGGSTSVVWGLVTAGFC NLCIAVSLAEFLSAYPTAGGQYHWVAVISWPKWVPILSWVTGWINVAGWVALVATNALLSCELIAGIVSSVYPDF VWQRWQEFLIYVGYTLLAFVINAFMNSVLPIIYRGAFTWSIGGFVLICITVLACASPDYNSAYFVFCDFVNQTGW PDGVAWLLGLLQGGLGVTAFDAVAHMIEEIPQPSIKGPKIMVVCVGIGTFTGAVFLIVLLFVAGNMDEVVNSSAG PLLEILIHATNNRVGGICLLMLPLVCLLFATLSVMTTSSRMIFAFARDGGLPASKFFARVHPRLGLPLNALMLTA FVVIIFGCIYLGSSSAFNAIISASVVALDLSYAMPIAVNCLRGRRTLPDRKWKVPNAIGWVIDTISLSYIALTTV LFLFPPDRPVTGSSMNYCIVAFAIIVIVSVIQWVVDGRKNFTGPRVDLS* |
| Coding | >Ani_SJS72_1|g3668.t1 ATGGAAGAAATGAAAGTCGCCCGCGATGGGCCCGAGGATGATGTCCAACTGGCCGAAATGGGTCATAAACCCGAG CTGCAACGGAACTTTTCGACCTTGTCTATGCTTGGACTGGCCTTTGCGGTGCTTAATTCTTGGACGGCTCTATCC GCGAGCTTATCCCTCAGCTTACCCTCAGGGGGAAGTACTAGTGTCGTCTGGGGTTTGGTCACGGCCGGATTCTGC AACCTCTGTATTGCAGTGTCGCTAGCTGAGTTCTTGTCCGCATATCCAACGGCGGGGGGCCAGTATCATTGGGTA GCCGTTATATCCTGGCCAAAATGGGTGCCTATCCTATCCTGGGTAACCGGATGGATTAATGTGGCGGGATGGGTT GCCCTTGTCGCCACCAATGCGCTTCTTTCCTGCGAATTGATCGCTGGGATAGTGTCATCTGTGTACCCGGACTTT GTTTGGCAGCGCTGGCAAGAGTTCCTGATCTATGTGGGATACACATTGCTTGCATTCGTCATCAATGCGTTCATG AATTCAGTCCTGCCTATCATTTATCGTGGAGCATTCACCTGGTCCATCGGTGGTTTTGTCCTTATCTGCATCACG GTGCTGGCTTGTGCATCCCCGGATTACAATTCTGCTTACTTTGTATTCTGCGACTTTGTCAATCAAACTGGCTGG CCCGATGGAGTGGCTTGGTTACTGGGGCTGCTTCAAGGGGGACTTGGAGTTACCGCATTTGACGCGGTGGCTCAT ATGATCGAAGAGATCCCCCAACCCTCAATCAAAGGACCCAAGATCATGGTCGTCTGCGTCGGCATTGGCACATTC ACCGGGGCCGTCTTCCTTATTGTTCTGCTCTTCGTCGCGGGCAACATGGACGAGGTAGTCAATTCCAGCGCGGGC CCTCTCCTGGAAATTCTCATCCATGCTACCAACAACCGCGTGGGCGGCATCTGTCTGCTCATGCTCCCCCTCGTG TGTCTTTTATTTGCAACCCTCAGCGTCATGACAACAAGTAGTCGAATGATCTTTGCATTCGCCAGAGATGGCGGC CTCCCCGCCTCCAAGTTCTTCGCACGCGTGCACCCCAGACTCGGCCTTCCCTTGAACGCGCTAATGTTGACTGCC TTTGTGGTGATTATTTTCGGCTGCATTTACCTCGGATCGAGCAGTGCCTTCAACGCAATCATCTCCGCCTCCGTC GTCGCGCTGGATCTCTCCTACGCTATGCCGATCGCAGTCAATTGTCTGCGCGGACGGAGAACGCTCCCTGATCGC AAGTGGAAGGTTCCTAATGCTATTGGATGGGTGATTGATACTATCTCGCTATCGTATATTGCACTTACGACGGTG CTGTTCCTATTCCCGCCTGATAGGCCGGTTACGGGGAGTAGTATGAATTACTGCATTGTTGCTTTCGCCATTATC GTCATCGTTTCAGTGATACAGTGGGTGGTTGACGGGAGGAAGAATTTTACGGGGCCGAGGGTGGATTTATCTTGA |
| Transcript | >Ani_SJS72_1|g3668.t1 ATGGAAGAAATGAAAGTCGCCCGCGATGGGCCCGAGGATGATGTCCAACTGGCCGAAATGGGTCATAAACCCGAG CTGCAACGGAACTTTTCGACCTTGTCTATGCTTGGACTGGCCTTTGCGGTGCTTAATTCTTGGACGGCTCTATCC GCGAGCTTATCCCTCAGCTTACCCTCAGGGGGAAGTACTAGTGTCGTCTGGGGTTTGGTCACGGCCGGATTCTGC AACCTCTGTATTGCAGTGTCGCTAGCTGAGTTCTTGTCCGCATATCCAACGGCGGGGGGCCAGTATCATTGGGTA GCCGTTATATCCTGGCCAAAATGGGTGCCTATCCTATCCTGGGTAACCGGATGGATTAATGTGGCGGGATGGGTT GCCCTTGTCGCCACCAATGCGCTTCTTTCCTGCGAATTGATCGCTGGGATAGTGTCATCTGTGTACCCGGACTTT GTTTGGCAGCGCTGGCAAGAGTTCCTGATCTATGTGGGATACACATTGCTTGCATTCGTCATCAATGCGTTCATG AATTCAGTCCTGCCTATCATTTATCGTGGAGCATTCACCTGGTCCATCGGTGGTTTTGTCCTTATCTGCATCACG GTGCTGGCTTGTGCATCCCCGGATTACAATTCTGCTTACTTTGTATTCTGCGACTTTGTCAATCAAACTGGCTGG CCCGATGGAGTGGCTTGGTTACTGGGGCTGCTTCAAGGGGGACTTGGAGTTACCGCATTTGACGCGGTGGCTCAT ATGATCGAAGAGATCCCCCAACCCTCAATCAAAGGACCCAAGATCATGGTCGTCTGCGTCGGCATTGGCACATTC ACCGGGGCCGTCTTCCTTATTGTTCTGCTCTTCGTCGCGGGCAACATGGACGAGGTAGTCAATTCCAGCGCGGGC CCTCTCCTGGAAATTCTCATCCATGCTACCAACAACCGCGTGGGCGGCATCTGTCTGCTCATGCTCCCCCTCGTG TGTCTTTTATTTGCAACCCTCAGCGTCATGACAACAAGTAGTCGAATGATCTTTGCATTCGCCAGAGATGGCGGC CTCCCCGCCTCCAAGTTCTTCGCACGCGTGCACCCCAGACTCGGCCTTCCCTTGAACGCGCTAATGTTGACTGCC TTTGTGGTGATTATTTTCGGCTGCATTTACCTCGGATCGAGCAGTGCCTTCAACGCAATCATCTCCGCCTCCGTC GTCGCGCTGGATCTCTCCTACGCTATGCCGATCGCAGTCAATTGTCTGCGCGGACGGAGAACGCTCCCTGATCGC AAGTGGAAGGTTCCTAATGCTATTGGATGGGTGATTGATACTATCTCGCTATCGTATATTGCACTTACGACGGTG CTGTTCCTATTCCCGCCTGATAGGCCGGTTACGGGGAGTAGTATGAATTACTGCATTGTTGCTTTCGCCATTATC GTCATCGTTTCAGTGATACAGTGGGTGGTTGACGGGAGGAAGAATTTTACGGGGCCGAGGGTGGATTTATCTTGA |
| Gene | >Ani_SJS72_1|g3668.t1 ATGGAAGAAATGAAAGTCGCCCGCGATGGGCCCGAGGATGATGTCCAACTGGCCGAAATGGGTCATAAACCCGAG CTGCAACGGAACTTTTCGACCTTGTGTGTACTACCTAATCCTAGATGACCCGGGCGAAGGAACCCTATTGACCCG AGATTAGGTCTATGCTTGGACTGGCCTTTGCGGTGCTTAATGTGCGTCTTCTGCTGTGCCAACGGGCCGATCACA CGTGCTGATAATCTGCCGATTAGTCTTGGACGGCTCTATCCGCGAGCTTATCCCTCAGCTTACCCTCAGGGGGAA GTACTAGTGTCGTCTGGGGTGGGTATGCCAATGGAACTAGCTGCCTGTTTAGGTTTGCTAACCCCCAGTCACAGG TTTGGTCACGGCCGGATTCTGCAACCTCTGTATTGCAGTGTCGCTAGCTGAGTTCTTGTCCGCATATCCAACGTA AGTTCCATCAGAATAGCTTGGTTTGCTAGTGGGTGAGTGACTGACGAGGATGTATCAGGGCGGGGGGCCAGTATC ATTGGGTAGCCGGTATGTTTTCCCGCAGTAACTGCTCAGGTGCTATACTAATGTCCACTCACAGTTAGTACGTAG AATTATCCCAGCCTCGTTCGTATCTACTAACATGTCCCAGTATCCTGGCCAAAATGGGTGCCTATCCTATCCTGG GTAACCGGATGGATTAATGTGGCGGGATGGGTATGTCTCCGAAGAAATGGCTCGATTATCGCTGACCCGCCAGGT TGCCCTTGTCGCCACCAATGCGCTTCTTTCCTGCGAATTGATCGCTGGGATAGTGTCATCTGTGTACCCGGTAAG CCCCCAATACCTTACTACAATAATCTTTGATGTTGATGCAATGCTGCTAGGACTTTGTTTGGCAGCGCTGGCAAG AGTTCCTGATCTATGTGGGATACACATTGCTTGCATTCGTCATCAATGCGTTCATGAATTCAGTCCTGCCTATCA TTTATCGTGGAGCATGTAAGTTACTGTGCGGCAGCCATCTCACTCCGATCGGGTCATTAATTGAGACAGTCACCT GGTCCATCGGTGGTTTTGTCCTTATCTGCATCACGGTGCTGGCTTGTGCATCCCCGGATTACAATTCTGCTTAGT ATGTCTGCCTCTGTGTCTTGGCTACACACCATGCTGACCATGCATATAGCTTTGTATTCTGCGACTTTGTCAATC AAACTGGCTGTAAGTTGACTGGTGGAAACCTGTGGATATCGCAAGTCAAGCTAACAAGCGACAGGGCCCGATGGA GTGGCTTGGTTACTGGGGGTTAGCCACATCTCTTATACCGAAGTCTATCACGACGCTAACAGACGCAGCTGCTTC AAGGGGGACTTGGAGTTACCGCATTTGTAAGAATCCAGAATGCCAGTACTGATCCCAGTCTAACATGAATAGGAC GCGGTGGCTCATATGATCGAAGGTATCTTCTCTAGTATGCAGCCTAAATAGTACATTACTAAACTCTCGAACAGA GATCCCCCAACCCTCAATCAAAGGACCCAAGATCATGGTCGTCTGCGTCGGCATTGGCACATTCACCGGGGCCGT CTTCCTTATTGTTCTGCTCTTCGTCGCGGGCAACATGGACGAGGTAGTCAATTCCAGCGCGGGCCCTCTCCTGGA AATTCTCATCCATGCTACCAACAACCGCGTGGGCGGCATCTGTCTGCTCATGTATATTCCACCCCCTCTATTCCA TGGGACCAGCACTAACGATGCAATACAGGCTCCCCCTCGTGTGTCTTTTATTTGCAACCCTCAGCGTCATGACAA CAAGTAGTCGAATGATCTTTGCATTCGCCAGGCATCTCACCCCCTCCCCCAAGTTCAGAAAGGCACGAAGACTAA CATCAAACAGAGATGGCGGCCTCCCCGCCTCCAAGTTCTTCGCACGCGTGCACCCCAGACTCGGCCTTCCCTTGA ACGCGCTAATGTTGACTGCCTTTGTGGTGATTATTTTCGGCTGCATTTACCTCGGATCGAGCAGGTACTGCGTTT CCCCCAGCATCATTCCACGTTAAAAAGATACACACATAACTAAGATAAATCAGTGCCTTCAACGCAATCATCTCC GCCTCCGTCGTCGCGCTGGATCTCTCCTACGCTATGCCGATCGCAGTCAATTGTCTGCGCGGACGGAGAACGCTC CCTGATCGCAAGTGGAAGGTTCCTAATGCTATTGGATGGGTGATTGATACTGTATGTCATGTGACCCATGAATTG GGACAATATGGAGGGGATAGGTGATGTGCTGACCGAGTATATCTAGATCTCGCTATCGTATATTGCACTTACGAC GGTGCTGTTCCTATTCCCGCCTGATAGGCCGGTTACGGGGAGTAGTATGAGTAAGTCTACCCTTTCTACAGGAAG GTTGACTGGGAGAGGTTGTGTTCATTGCTGATATCCGCTGTTAGATTACTGCATTGTTGCTTTCGCCATTATCGT CATCGTTTCAGTGATACAGTGGGTGGTTGACGGGAGGAAGAATTTTACGGGGCCGAGGGTGGATTTATCTTGA |