Protein ID | Ani_SJS72_1|g3668.t1 |
Gene name | |
Location | scaffold_021:42166..44714 |
Strand | - |
Gene length (bp) | 2548 |
Transcript length (bp) | 1500 |
Coding sequence length (bp) | 1500 |
Protein length (aa) | 500 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13520 | AA_permease_2 | Amino acid permease | 1.4E-54 | 33 | 474 |
PF00324 | AA_permease | Amino acid permease | 8.9E-18 | 47 | 483 |
GO Term | Description | Terminal node |
---|---|---|
GO:0055085 | transmembrane transport | Yes |
GO:0016020 | membrane | Yes |
GO:0022857 | transmembrane transporter activity | Yes |
GO:0009987 | cellular process | No |
GO:0110165 | cellular anatomical entity | No |
GO:0005215 | transporter activity | No |
GO:0005575 | cellular_component | No |
GO:0003674 | molecular_function | No |
GO:0006810 | transport | No |
GO:0008150 | biological_process | No |
GO:0051234 | establishment of localization | No |
GO:0051179 | localization | No |
Domain # | Start | End | Length |
---|---|---|---|
1 | 33 | 55 | 22 |
2 | 65 | 87 | 22 |
3 | 99 | 121 | 22 |
4 | 125 | 147 | 22 |
5 | 159 | 181 | 22 |
6 | 185 | 207 | 22 |
7 | 228 | 250 | 22 |
8 | 265 | 287 | 22 |
9 | 314 | 336 | 22 |
10 | 364 | 386 | 22 |
11 | 391 | 413 | 22 |
12 | 433 | 455 | 22 |
13 | 468 | 485 | 17 |
Orthofinder run ID | 3 |
Orthogroup | 7944 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g3668.t1 MEEMKVARDGPEDDVQLAEMGHKPELQRNFSTLSMLGLAFAVLNSWTALSASLSLSLPSGGSTSVVWGLVTAGFC NLCIAVSLAEFLSAYPTAGGQYHWVAVISWPKWVPILSWVTGWINVAGWVALVATNALLSCELIAGIVSSVYPDF VWQRWQEFLIYVGYTLLAFVINAFMNSVLPIIYRGAFTWSIGGFVLICITVLACASPDYNSAYFVFCDFVNQTGW PDGVAWLLGLLQGGLGVTAFDAVAHMIEEIPQPSIKGPKIMVVCVGIGTFTGAVFLIVLLFVAGNMDEVVNSSAG PLLEILIHATNNRVGGICLLMLPLVCLLFATLSVMTTSSRMIFAFARDGGLPASKFFARVHPRLGLPLNALMLTA FVVIIFGCIYLGSSSAFNAIISASVVALDLSYAMPIAVNCLRGRRTLPDRKWKVPNAIGWVIDTISLSYIALTTV LFLFPPDRPVTGSSMNYCIVAFAIIVIVSVIQWVVDGRKNFTGPRVDLS* |
Coding | >Ani_SJS72_1|g3668.t1 ATGGAAGAAATGAAAGTCGCCCGCGATGGGCCCGAGGATGATGTCCAACTGGCCGAAATGGGTCATAAACCCGAG CTGCAACGGAACTTTTCGACCTTGTCTATGCTTGGACTGGCCTTTGCGGTGCTTAATTCTTGGACGGCTCTATCC GCGAGCTTATCCCTCAGCTTACCCTCAGGGGGAAGTACTAGTGTCGTCTGGGGTTTGGTCACGGCCGGATTCTGC AACCTCTGTATTGCAGTGTCGCTAGCTGAGTTCTTGTCCGCATATCCAACGGCGGGGGGCCAGTATCATTGGGTA GCCGTTATATCCTGGCCAAAATGGGTGCCTATCCTATCCTGGGTAACCGGATGGATTAATGTGGCGGGATGGGTT GCCCTTGTCGCCACCAATGCGCTTCTTTCCTGCGAATTGATCGCTGGGATAGTGTCATCTGTGTACCCGGACTTT GTTTGGCAGCGCTGGCAAGAGTTCCTGATCTATGTGGGATACACATTGCTTGCATTCGTCATCAATGCGTTCATG AATTCAGTCCTGCCTATCATTTATCGTGGAGCATTCACCTGGTCCATCGGTGGTTTTGTCCTTATCTGCATCACG GTGCTGGCTTGTGCATCCCCGGATTACAATTCTGCTTACTTTGTATTCTGCGACTTTGTCAATCAAACTGGCTGG CCCGATGGAGTGGCTTGGTTACTGGGGCTGCTTCAAGGGGGACTTGGAGTTACCGCATTTGACGCGGTGGCTCAT ATGATCGAAGAGATCCCCCAACCCTCAATCAAAGGACCCAAGATCATGGTCGTCTGCGTCGGCATTGGCACATTC ACCGGGGCCGTCTTCCTTATTGTTCTGCTCTTCGTCGCGGGCAACATGGACGAGGTAGTCAATTCCAGCGCGGGC CCTCTCCTGGAAATTCTCATCCATGCTACCAACAACCGCGTGGGCGGCATCTGTCTGCTCATGCTCCCCCTCGTG TGTCTTTTATTTGCAACCCTCAGCGTCATGACAACAAGTAGTCGAATGATCTTTGCATTCGCCAGAGATGGCGGC CTCCCCGCCTCCAAGTTCTTCGCACGCGTGCACCCCAGACTCGGCCTTCCCTTGAACGCGCTAATGTTGACTGCC TTTGTGGTGATTATTTTCGGCTGCATTTACCTCGGATCGAGCAGTGCCTTCAACGCAATCATCTCCGCCTCCGTC GTCGCGCTGGATCTCTCCTACGCTATGCCGATCGCAGTCAATTGTCTGCGCGGACGGAGAACGCTCCCTGATCGC AAGTGGAAGGTTCCTAATGCTATTGGATGGGTGATTGATACTATCTCGCTATCGTATATTGCACTTACGACGGTG CTGTTCCTATTCCCGCCTGATAGGCCGGTTACGGGGAGTAGTATGAATTACTGCATTGTTGCTTTCGCCATTATC GTCATCGTTTCAGTGATACAGTGGGTGGTTGACGGGAGGAAGAATTTTACGGGGCCGAGGGTGGATTTATCTTGA |
Transcript | >Ani_SJS72_1|g3668.t1 ATGGAAGAAATGAAAGTCGCCCGCGATGGGCCCGAGGATGATGTCCAACTGGCCGAAATGGGTCATAAACCCGAG CTGCAACGGAACTTTTCGACCTTGTCTATGCTTGGACTGGCCTTTGCGGTGCTTAATTCTTGGACGGCTCTATCC GCGAGCTTATCCCTCAGCTTACCCTCAGGGGGAAGTACTAGTGTCGTCTGGGGTTTGGTCACGGCCGGATTCTGC AACCTCTGTATTGCAGTGTCGCTAGCTGAGTTCTTGTCCGCATATCCAACGGCGGGGGGCCAGTATCATTGGGTA GCCGTTATATCCTGGCCAAAATGGGTGCCTATCCTATCCTGGGTAACCGGATGGATTAATGTGGCGGGATGGGTT GCCCTTGTCGCCACCAATGCGCTTCTTTCCTGCGAATTGATCGCTGGGATAGTGTCATCTGTGTACCCGGACTTT GTTTGGCAGCGCTGGCAAGAGTTCCTGATCTATGTGGGATACACATTGCTTGCATTCGTCATCAATGCGTTCATG AATTCAGTCCTGCCTATCATTTATCGTGGAGCATTCACCTGGTCCATCGGTGGTTTTGTCCTTATCTGCATCACG GTGCTGGCTTGTGCATCCCCGGATTACAATTCTGCTTACTTTGTATTCTGCGACTTTGTCAATCAAACTGGCTGG CCCGATGGAGTGGCTTGGTTACTGGGGCTGCTTCAAGGGGGACTTGGAGTTACCGCATTTGACGCGGTGGCTCAT ATGATCGAAGAGATCCCCCAACCCTCAATCAAAGGACCCAAGATCATGGTCGTCTGCGTCGGCATTGGCACATTC ACCGGGGCCGTCTTCCTTATTGTTCTGCTCTTCGTCGCGGGCAACATGGACGAGGTAGTCAATTCCAGCGCGGGC CCTCTCCTGGAAATTCTCATCCATGCTACCAACAACCGCGTGGGCGGCATCTGTCTGCTCATGCTCCCCCTCGTG TGTCTTTTATTTGCAACCCTCAGCGTCATGACAACAAGTAGTCGAATGATCTTTGCATTCGCCAGAGATGGCGGC CTCCCCGCCTCCAAGTTCTTCGCACGCGTGCACCCCAGACTCGGCCTTCCCTTGAACGCGCTAATGTTGACTGCC TTTGTGGTGATTATTTTCGGCTGCATTTACCTCGGATCGAGCAGTGCCTTCAACGCAATCATCTCCGCCTCCGTC GTCGCGCTGGATCTCTCCTACGCTATGCCGATCGCAGTCAATTGTCTGCGCGGACGGAGAACGCTCCCTGATCGC AAGTGGAAGGTTCCTAATGCTATTGGATGGGTGATTGATACTATCTCGCTATCGTATATTGCACTTACGACGGTG CTGTTCCTATTCCCGCCTGATAGGCCGGTTACGGGGAGTAGTATGAATTACTGCATTGTTGCTTTCGCCATTATC GTCATCGTTTCAGTGATACAGTGGGTGGTTGACGGGAGGAAGAATTTTACGGGGCCGAGGGTGGATTTATCTTGA |
Gene | >Ani_SJS72_1|g3668.t1 ATGGAAGAAATGAAAGTCGCCCGCGATGGGCCCGAGGATGATGTCCAACTGGCCGAAATGGGTCATAAACCCGAG CTGCAACGGAACTTTTCGACCTTGTGTGTACTACCTAATCCTAGATGACCCGGGCGAAGGAACCCTATTGACCCG AGATTAGGTCTATGCTTGGACTGGCCTTTGCGGTGCTTAATGTGCGTCTTCTGCTGTGCCAACGGGCCGATCACA CGTGCTGATAATCTGCCGATTAGTCTTGGACGGCTCTATCCGCGAGCTTATCCCTCAGCTTACCCTCAGGGGGAA GTACTAGTGTCGTCTGGGGTGGGTATGCCAATGGAACTAGCTGCCTGTTTAGGTTTGCTAACCCCCAGTCACAGG TTTGGTCACGGCCGGATTCTGCAACCTCTGTATTGCAGTGTCGCTAGCTGAGTTCTTGTCCGCATATCCAACGTA AGTTCCATCAGAATAGCTTGGTTTGCTAGTGGGTGAGTGACTGACGAGGATGTATCAGGGCGGGGGGCCAGTATC ATTGGGTAGCCGGTATGTTTTCCCGCAGTAACTGCTCAGGTGCTATACTAATGTCCACTCACAGTTAGTACGTAG AATTATCCCAGCCTCGTTCGTATCTACTAACATGTCCCAGTATCCTGGCCAAAATGGGTGCCTATCCTATCCTGG GTAACCGGATGGATTAATGTGGCGGGATGGGTATGTCTCCGAAGAAATGGCTCGATTATCGCTGACCCGCCAGGT TGCCCTTGTCGCCACCAATGCGCTTCTTTCCTGCGAATTGATCGCTGGGATAGTGTCATCTGTGTACCCGGTAAG CCCCCAATACCTTACTACAATAATCTTTGATGTTGATGCAATGCTGCTAGGACTTTGTTTGGCAGCGCTGGCAAG AGTTCCTGATCTATGTGGGATACACATTGCTTGCATTCGTCATCAATGCGTTCATGAATTCAGTCCTGCCTATCA TTTATCGTGGAGCATGTAAGTTACTGTGCGGCAGCCATCTCACTCCGATCGGGTCATTAATTGAGACAGTCACCT GGTCCATCGGTGGTTTTGTCCTTATCTGCATCACGGTGCTGGCTTGTGCATCCCCGGATTACAATTCTGCTTAGT ATGTCTGCCTCTGTGTCTTGGCTACACACCATGCTGACCATGCATATAGCTTTGTATTCTGCGACTTTGTCAATC AAACTGGCTGTAAGTTGACTGGTGGAAACCTGTGGATATCGCAAGTCAAGCTAACAAGCGACAGGGCCCGATGGA GTGGCTTGGTTACTGGGGGTTAGCCACATCTCTTATACCGAAGTCTATCACGACGCTAACAGACGCAGCTGCTTC AAGGGGGACTTGGAGTTACCGCATTTGTAAGAATCCAGAATGCCAGTACTGATCCCAGTCTAACATGAATAGGAC GCGGTGGCTCATATGATCGAAGGTATCTTCTCTAGTATGCAGCCTAAATAGTACATTACTAAACTCTCGAACAGA GATCCCCCAACCCTCAATCAAAGGACCCAAGATCATGGTCGTCTGCGTCGGCATTGGCACATTCACCGGGGCCGT CTTCCTTATTGTTCTGCTCTTCGTCGCGGGCAACATGGACGAGGTAGTCAATTCCAGCGCGGGCCCTCTCCTGGA AATTCTCATCCATGCTACCAACAACCGCGTGGGCGGCATCTGTCTGCTCATGTATATTCCACCCCCTCTATTCCA TGGGACCAGCACTAACGATGCAATACAGGCTCCCCCTCGTGTGTCTTTTATTTGCAACCCTCAGCGTCATGACAA CAAGTAGTCGAATGATCTTTGCATTCGCCAGGCATCTCACCCCCTCCCCCAAGTTCAGAAAGGCACGAAGACTAA CATCAAACAGAGATGGCGGCCTCCCCGCCTCCAAGTTCTTCGCACGCGTGCACCCCAGACTCGGCCTTCCCTTGA ACGCGCTAATGTTGACTGCCTTTGTGGTGATTATTTTCGGCTGCATTTACCTCGGATCGAGCAGGTACTGCGTTT CCCCCAGCATCATTCCACGTTAAAAAGATACACACATAACTAAGATAAATCAGTGCCTTCAACGCAATCATCTCC GCCTCCGTCGTCGCGCTGGATCTCTCCTACGCTATGCCGATCGCAGTCAATTGTCTGCGCGGACGGAGAACGCTC CCTGATCGCAAGTGGAAGGTTCCTAATGCTATTGGATGGGTGATTGATACTGTATGTCATGTGACCCATGAATTG GGACAATATGGAGGGGATAGGTGATGTGCTGACCGAGTATATCTAGATCTCGCTATCGTATATTGCACTTACGAC GGTGCTGTTCCTATTCCCGCCTGATAGGCCGGTTACGGGGAGTAGTATGAGTAAGTCTACCCTTTCTACAGGAAG GTTGACTGGGAGAGGTTGTGTTCATTGCTGATATCCGCTGTTAGATTACTGCATTGTTGCTTTCGCCATTATCGT CATCGTTTCAGTGATACAGTGGGTGGTTGACGGGAGGAAGAATTTTACGGGGCCGAGGGTGGATTTATCTTGA |