Protein ID | Ani_SJS72_1|g3649.t1 |
Gene name | |
Location | scaffold_021:2399..3692 |
Strand | + |
Gene length (bp) | 1293 |
Transcript length (bp) | 1158 |
Coding sequence length (bp) | 1158 |
Protein length (aa) | 386 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 31 | 53 | 22 |
2 | 66 | 88 | 22 |
3 | 114 | 136 | 22 |
4 | 149 | 171 | 22 |
5 | 204 | 226 | 22 |
6 | 233 | 255 | 22 |
7 | 275 | 297 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g3649.t1 MSATMSSSPSARSSTLTPAELAEWSQSLKPVVLGPSITMVVLGNLGVMLRIWAQRRIHKRPVQEDYWLIMAVLFS NVGSIAVLVAVHFGLGYHQFRVNAEDPSLRSLQWIFLCMWLTATFNGPSMLATKIALLLYYRRLFIVQQIWLRIF WWTNVVYVVLWGIGSTITYMLSCVPASYYWERFNPESTMHGSCRNTTNADGVPLILDLISDVAILALPIATIATL QMPLARKAGLIIVFSVGFLAIVSAVARVVVLYKATSLHTDFPYAAAPFEMLVVIQLNMAIVCATAVPIASGFRVA FSKKRRRDKSWMAKGVSGNTSSSHASAAARAARLRLEEEASSSTEQLHMGHFTTSCASKGPEDRARGEEPVTGNG IMVKMDVDIR* |
Coding | >Ani_SJS72_1|g3649.t1 ATGTCGGCGACAATGTCCTCATCGCCCTCCGCCCGCTCTTCGACGCTAACTCCGGCGGAGCTGGCCGAGTGGTCG CAGTCCCTCAAGCCGGTGGTGTTGGGTCCCAGTATCACCATGGTGGTACTTGGCAATCTGGGTGTGATGCTGCGT ATCTGGGCCCAACGGCGCATTCACAAACGTCCCGTGCAGGAGGACTATTGGCTGATCATGGCCGTTCTCTTTTCC AACGTGGGCTCGATCGCCGTCCTAGTTGCGGTGCATTTTGGATTGGGGTACCATCAGTTCCGCGTCAACGCTGAG GATCCATCGCTGCGTTCCCTGCAGTGGATCTTCTTGTGCATGTGGCTCACGGCTACCTTCAACGGGCCCTCCATG CTGGCCACCAAGATTGCCCTGCTCCTCTACTACCGCCGGCTGTTCATCGTGCAGCAGATCTGGCTGCGTATCTTT TGGTGGACCAATGTTGTGTACGTGGTGCTCTGGGGCATCGGCTCGACCATCACATATATGCTCTCGTGCGTGCCA GCCAGCTACTACTGGGAGCGTTTCAACCCGGAGTCGACGATGCACGGCAGCTGCCGCAACACCACCAACGCCGAC GGCGTGCCGCTCATTCTGGACCTGATCTCCGACGTCGCGATCCTGGCGCTGCCCATTGCTACCATCGCCACCCTG CAGATGCCGCTAGCCCGCAAAGCTGGGCTCATCATCGTGTTCTCGGTCGGATTCCTTGCCATTGTATCCGCGGTC GCCCGCGTCGTCGTGCTCTACAAGGCCACGAGCCTGCACACGGACTTCCCCTACGCAGCTGCCCCCTTCGAGATG CTGGTCGTGATCCAGCTCAACATGGCTATCGTGTGCGCAACCGCGGTGCCCATCGCCTCGGGCTTCCGGGTGGCC TTCAGCAAGAAGCGCCGCCGCGACAAGAGCTGGATGGCAAAAGGCGTGAGCGGGAATACGTCCAGCAGCCACGCC TCGGCGGCGGCGCGGGCCGCACGCCTGCGGCTCGAGGAAGAGGCCAGCAGCAGCACCGAACAGCTGCATATGGGG CACTTCACCACCAGCTGTGCCTCCAAGGGGCCGGAAGATCGGGCGCGGGGAGAAGAGCCCGTGACAGGGAATGGG ATTATGGTGAAGATGGATGTGGATATTCGATAG |
Transcript | >Ani_SJS72_1|g3649.t1 ATGTCGGCGACAATGTCCTCATCGCCCTCCGCCCGCTCTTCGACGCTAACTCCGGCGGAGCTGGCCGAGTGGTCG CAGTCCCTCAAGCCGGTGGTGTTGGGTCCCAGTATCACCATGGTGGTACTTGGCAATCTGGGTGTGATGCTGCGT ATCTGGGCCCAACGGCGCATTCACAAACGTCCCGTGCAGGAGGACTATTGGCTGATCATGGCCGTTCTCTTTTCC AACGTGGGCTCGATCGCCGTCCTAGTTGCGGTGCATTTTGGATTGGGGTACCATCAGTTCCGCGTCAACGCTGAG GATCCATCGCTGCGTTCCCTGCAGTGGATCTTCTTGTGCATGTGGCTCACGGCTACCTTCAACGGGCCCTCCATG CTGGCCACCAAGATTGCCCTGCTCCTCTACTACCGCCGGCTGTTCATCGTGCAGCAGATCTGGCTGCGTATCTTT TGGTGGACCAATGTTGTGTACGTGGTGCTCTGGGGCATCGGCTCGACCATCACATATATGCTCTCGTGCGTGCCA GCCAGCTACTACTGGGAGCGTTTCAACCCGGAGTCGACGATGCACGGCAGCTGCCGCAACACCACCAACGCCGAC GGCGTGCCGCTCATTCTGGACCTGATCTCCGACGTCGCGATCCTGGCGCTGCCCATTGCTACCATCGCCACCCTG CAGATGCCGCTAGCCCGCAAAGCTGGGCTCATCATCGTGTTCTCGGTCGGATTCCTTGCCATTGTATCCGCGGTC GCCCGCGTCGTCGTGCTCTACAAGGCCACGAGCCTGCACACGGACTTCCCCTACGCAGCTGCCCCCTTCGAGATG CTGGTCGTGATCCAGCTCAACATGGCTATCGTGTGCGCAACCGCGGTGCCCATCGCCTCGGGCTTCCGGGTGGCC TTCAGCAAGAAGCGCCGCCGCGACAAGAGCTGGATGGCAAAAGGCGTGAGCGGGAATACGTCCAGCAGCCACGCC TCGGCGGCGGCGCGGGCCGCACGCCTGCGGCTCGAGGAAGAGGCCAGCAGCAGCACCGAACAGCTGCATATGGGG CACTTCACCACCAGCTGTGCCTCCAAGGGGCCGGAAGATCGGGCGCGGGGAGAAGAGCCCGTGACAGGGAATGGG ATTATGGTGAAGATGGATGTGGATATTCGATAG |
Gene | >Ani_SJS72_1|g3649.t1 ATGTCGGCGACAATGTCCTCATCGCCCTCCGCCCGCTCTTCGACGCTAACTCCGGCGGAGCTGGCCGAGTGGTCG CAGTCCCTCAAGCCGGTGGTGTTGGGTCCCAGTATCACCATGGTGGTACTTGGCAATCTGGGTGTGATGCTGCGT ATCTGGGCCCAACGGCGCATTCACAAACGTCCCGTGCAGGAGGACTATTGGCTGATCATGGCCGTTGTATGTTAT CTTTCTTTCGCCGCTCTGTCGACCCATCTCAATCAACTCGGTCAATAACCCCTCATATCTGTCTCTAGCTCTTTT CCAACGTGGGCTCGATCGCCGTCCTAGTTGCGGTGCATTTTGGATTGGGGTACCATCAGTTCCGCGTCAACGCTG AGGATCCATCGCTGCGTTCCCTGCAGTGGATCTTCTTGTGCATGTGGCTCACGGCTACCTTCAACGGGCCCTCCA TGCTGGCCACCAAGATTGCCCTGCTCCTCTACTACCGCCGGCTGTTCATCGTGCAGCAGATCTGGCTGCGTATCT TTTGGTGGACCAATGTTGTGTACGTGGTGCTCTGGGGCATCGGCTCGACCATCACATATATGCTCTCGTGCGTGC CAGCCAGCTACTACTGGGAGCGTTTCAACCCGGAGTCGACGATGCACGGCAGCTGCCGCAACACCACCAACGCCG ACGGCGTGCCGCTCATTCTGGACCTGATCTCCGACGTCGCGATCCTGGCGCTGCCCATTGCTACCATCGCCACCC TGCAGATGCCGCTAGCCCGCAAAGCTGGGCTCATCATCGTGTTCTCGGTCGGATTCCTGTACGTTCCCCTGAATG AGATTCCCTGTTATGTATAGCTAGCTTAACTCACTCCGCAGTGCCATTGTATCCGCGGTCGCCCGCGTCGTCGTG CTCTACAAGGCCACGAGCCTGCACACGGACTTCCCCTACGCAGCTGCCCCCTTCGAGATGCTGGTCGTGATCCAG CTCAACATGGCTATCGTGTGCGCAACCGCGGTGCCCATCGCCTCGGGCTTCCGGGTGGCCTTCAGCAAGAAGCGC CGCCGCGACAAGAGCTGGATGGCAAAAGGCGTGAGCGGGAATACGTCCAGCAGCCACGCCTCGGCGGCGGCGCGG GCCGCACGCCTGCGGCTCGAGGAAGAGGCCAGCAGCAGCACCGAACAGCTGCATATGGGGCACTTCACCACCAGC TGTGCCTCCAAGGGGCCGGAAGATCGGGCGCGGGGAGAAGAGCCCGTGACAGGGAATGGGATTATGGTGAAGATG GATGTGGATATTCGATAG |