© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g3634.t1 |
| Gene name | |
| Location | scaffold_020:363947..365406 |
| Strand | - |
| Gene length (bp) | 1459 |
| Transcript length (bp) | 1356 |
| Coding sequence length (bp) | 1356 |
| Protein length (aa) | 452 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05730 | CFEM | CFEM domain | 1.1E-04 | 34 | 98 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 235 | 254 | 19 |
| Orthofinder run ID | 3 |
| Orthogroup | 2211 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g3634.t1 MNLQQAIQHFFSINTQQADSDDAISRSHLVAHKLGEIPRCSLNCLYPLILSTCSHTDYTCLCTNLPTVAATAQFQ SCFHECPINPDQRLTPNSLLSLCNVFDIHPTLPEYMAPNINLNRRGEYINEVRTIYSIVTTIYASTQSTSEPTST EDPLATATAGVVSSIDSDDTSSSTIAPTTSSDDDTATTTSQQPNVVTVTETRLVSTMYMTSVATQTSSSDHKDAA GLSTGAKAGIGVAVPIAVAIIALLIFAWFQRRRKRKQQMGGINSSEESGQASAIQHAGGKNQSMTQNTTNLLPEI DGAPLNESDSRPVHSSADRPVFELSTGSVRKPRRGDPEIGSGVGGISGVDAKQGASGGEVASSASATLGEVPAEL SSDGVRDGESIASVVAYERMSSSELQEELARVARSRERLQYLQTLEEREDMIRRVLAGHGEDAVSRAESREDGGG G* |
| Coding | >Ani_SJS72_1|g3634.t1 ATGAACCTGCAACAAGCTATACAGCATTTCTTCTCAATCAACACACAACAAGCAGATTCTGACGATGCTATCTCT CGAAGTCATCTCGTCGCTCACAAGCTCGGCGAAATCCCCCGCTGCTCATTAAACTGCCTCTATCCTCTTATCCTC TCCACCTGCTCCCATACCGACTACACATGTCTGTGCACCAACTTACCAACAGTAGCAGCGACTGCACAATTTCAA TCATGTTTCCACGAATGTCCCATCAACCCCGACCAGCGATTAACACCCAACTCCCTTCTCTCCCTCTGCAACGTC TTCGACATCCATCCAACCCTCCCAGAATACATGGCGCCAAATATTAATCTCAACCGGCGAGGCGAGTACATCAAC GAGGTGCGGACCATCTATTCCATCGTGACAACAATCTACGCATCCACACAATCAACATCCGAACCAACATCAACC GAAGACCCATTAGCAACAGCCACCGCGGGAGTGGTCTCGAGCATCGACTCGGACGATACATCCTCCTCTACCATC GCTCCCACGACATCCTCAGATGACGACACCGCCACAACAACATCCCAACAACCCAACGTCGTCACAGTAACAGAG ACTCGTCTCGTCTCCACAATGTATATGACCTCAGTAGCAACGCAAACATCTTCCTCCGATCATAAAGATGCAGCT GGTCTATCCACCGGCGCAAAGGCCGGAATAGGAGTCGCGGTGCCCATCGCTGTTGCCATCATCGCGCTTCTAATA TTTGCCTGGTTTCAGCGGCGCAGGAAGAGGAAGCAGCAGATGGGAGGTATTAATAGTAGCGAAGAGAGCGGACAG GCTTCAGCGATACAGCATGCAGGGGGGAAGAATCAAAGTATGACTCAGAACACTACGAATTTGCTCCCTGAGATC GACGGTGCGCCACTCAACGAATCCGATAGTCGGCCCGTACATAGCTCGGCTGATCGGCCTGTGTTTGAGCTGAGT ACTGGGTCGGTTCGCAAGCCGAGGCGGGGTGATCCGGAGATTGGATCTGGGGTTGGTGGGATAAGTGGAGTGGAT GCTAAGCAGGGTGCTAGTGGAGGTGAAGTAGCTTCATCAGCCTCGGCTACATTGGGCGAAGTACCGGCTGAACTA TCGTCTGATGGCGTTAGGGACGGGGAATCGATAGCGTCAGTGGTGGCATATGAAAGGATGAGTTCGTCTGAGTTG CAGGAGGAATTGGCTAGGGTGGCGAGGAGTAGAGAGCGATTGCAGTATTTACAGACGTTGGAGGAGAGGGAGGAT ATGATTCGGAGGGTGCTTGCGGGGCATGGGGAGGATGCGGTGTCAAGGGCTGAGAGTCGGGAAGACGGCGGTGGT GGGTGA |
| Transcript | >Ani_SJS72_1|g3634.t1 ATGAACCTGCAACAAGCTATACAGCATTTCTTCTCAATCAACACACAACAAGCAGATTCTGACGATGCTATCTCT CGAAGTCATCTCGTCGCTCACAAGCTCGGCGAAATCCCCCGCTGCTCATTAAACTGCCTCTATCCTCTTATCCTC TCCACCTGCTCCCATACCGACTACACATGTCTGTGCACCAACTTACCAACAGTAGCAGCGACTGCACAATTTCAA TCATGTTTCCACGAATGTCCCATCAACCCCGACCAGCGATTAACACCCAACTCCCTTCTCTCCCTCTGCAACGTC TTCGACATCCATCCAACCCTCCCAGAATACATGGCGCCAAATATTAATCTCAACCGGCGAGGCGAGTACATCAAC GAGGTGCGGACCATCTATTCCATCGTGACAACAATCTACGCATCCACACAATCAACATCCGAACCAACATCAACC GAAGACCCATTAGCAACAGCCACCGCGGGAGTGGTCTCGAGCATCGACTCGGACGATACATCCTCCTCTACCATC GCTCCCACGACATCCTCAGATGACGACACCGCCACAACAACATCCCAACAACCCAACGTCGTCACAGTAACAGAG ACTCGTCTCGTCTCCACAATGTATATGACCTCAGTAGCAACGCAAACATCTTCCTCCGATCATAAAGATGCAGCT GGTCTATCCACCGGCGCAAAGGCCGGAATAGGAGTCGCGGTGCCCATCGCTGTTGCCATCATCGCGCTTCTAATA TTTGCCTGGTTTCAGCGGCGCAGGAAGAGGAAGCAGCAGATGGGAGGTATTAATAGTAGCGAAGAGAGCGGACAG GCTTCAGCGATACAGCATGCAGGGGGGAAGAATCAAAGTATGACTCAGAACACTACGAATTTGCTCCCTGAGATC GACGGTGCGCCACTCAACGAATCCGATAGTCGGCCCGTACATAGCTCGGCTGATCGGCCTGTGTTTGAGCTGAGT ACTGGGTCGGTTCGCAAGCCGAGGCGGGGTGATCCGGAGATTGGATCTGGGGTTGGTGGGATAAGTGGAGTGGAT GCTAAGCAGGGTGCTAGTGGAGGTGAAGTAGCTTCATCAGCCTCGGCTACATTGGGCGAAGTACCGGCTGAACTA TCGTCTGATGGCGTTAGGGACGGGGAATCGATAGCGTCAGTGGTGGCATATGAAAGGATGAGTTCGTCTGAGTTG CAGGAGGAATTGGCTAGGGTGGCGAGGAGTAGAGAGCGATTGCAGTATTTACAGACGTTGGAGGAGAGGGAGGAT ATGATTCGGAGGGTGCTTGCGGGGCATGGGGAGGATGCGGTGTCAAGGGCTGAGAGTCGGGAAGACGGCGGTGGT GGGTGA |
| Gene | >Ani_SJS72_1|g3634.t1 ATGAACCTGCAACAAGCTATACAGCATTTCTTCTCAATCAACACACAACAAGCAGATTCTGACGATGCTATCTCT CGAAGTCATCTCGTCGCTCACAAGCTCGGCGAAATCCCCCGCTGCTCAGTACTGGCCCCGGTCTACCACCTAACC TCCTACTAACCTCTTGCACATAGTTAAACTGCCTCTATCCTCTTATCCTCTCCACCTGCTCCCATACCGACTACA CATGTCTGTGCACCAACTTACCAACAGTAGCAGCGACTGCACAATTTCAATCATGTTTCCACGAATGTCCCATCA ACCCCGACCAGCGATGTCAGTACATCCCTCTCCCTACCTAACCGACGCCCTAACTCACAAGTAAACAGTAACACC CAACTCCCTTCTCTCCCTCTGCAACGTCTTCGACATCCATCCAACCCTCCCAGAATACATGGCGCCAAATATTAA TCTCAACCGGCGAGGCGAGTACATCAACGAGGTGCGGACCATCTATTCCATCGTGACAACAATCTACGCATCCAC ACAATCAACATCCGAACCAACATCAACCGAAGACCCATTAGCAACAGCCACCGCGGGAGTGGTCTCGAGCATCGA CTCGGACGATACATCCTCCTCTACCATCGCTCCCACGACATCCTCAGATGACGACACCGCCACAACAACATCCCA ACAACCCAACGTCGTCACAGTAACAGAGACTCGTCTCGTCTCCACAATGTATATGACCTCAGTAGCAACGCAAAC ATCTTCCTCCGATCATAAAGATGCAGCTGGTCTATCCACCGGCGCAAAGGCCGGAATAGGAGTCGCGGTGCCCAT CGCTGTTGCCATCATCGCGCTTCTAATATTTGCCTGGTTTCAGCGGCGCAGGAAGAGGAAGCAGCAGATGGGAGG TATTAATAGTAGCGAAGAGAGCGGACAGGCTTCAGCGATACAGCATGCAGGGGGGAAGAATCAAAGTATGACTCA GAACACTACGAATTTGCTCCCTGAGATCGACGGTGCGCCACTCAACGAATCCGATAGTCGGCCCGTACATAGCTC GGCTGATCGGCCTGTGTTTGAGCTGAGTACTGGGTCGGTTCGCAAGCCGAGGCGGGGTGATCCGGAGATTGGATC TGGGGTTGGTGGGATAAGTGGAGTGGATGCTAAGCAGGGTGCTAGTGGAGGTGAAGTAGCTTCATCAGCCTCGGC TACATTGGGCGAAGTACCGGCTGAACTATCGTCTGATGGCGTTAGGGACGGGGAATCGATAGCGTCAGTGGTGGC ATATGAAAGGATGAGTTCGTCTGAGTTGCAGGAGGAATTGGCTAGGGTGGCGAGGAGTAGAGAGCGATTGCAGTA TTTACAGACGTTGGAGGAGAGGGAGGATATGATTCGGAGGGTGCTTGCGGGGCATGGGGAGGATGCGGTGTCAAG GGCTGAGAGTCGGGAAGACGGCGGTGGTGGGTGA |