© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g3533.t1 |
| Gene name | |
| Location | scaffold_020:54431..55220 |
| Strand | + |
| Gene length (bp) | 789 |
| Transcript length (bp) | 531 |
| Coding sequence length (bp) | 531 |
| Protein length (aa) | 177 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03650 | MPC | Mitochondrial pyruvate carriers | 4.2E-50 | 49 | 155 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005743 | mitochondrial inner membrane | Yes |
| GO:0006850 | mitochondrial pyruvate transmembrane transport | Yes |
| GO:0051179 | localization | No |
| GO:0006811 | ion transport | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0046942 | carboxylic acid transport | No |
| GO:1905039 | carboxylic acid transmembrane transport | No |
| GO:0031090 | organelle membrane | No |
| GO:1990542 | mitochondrial transmembrane transport | No |
| GO:1903825 | organic acid transmembrane transport | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:1901475 | pyruvate transmembrane transport | No |
| GO:0098656 | anion transmembrane transport | No |
| GO:0009987 | cellular process | No |
| GO:0034220 | ion transmembrane transport | No |
| GO:0071702 | organic substance transport | No |
| GO:0015718 | monocarboxylic acid transport | No |
| GO:0016020 | membrane | No |
| GO:0015711 | organic anion transport | No |
| GO:0006848 | pyruvate transport | No |
| GO:0006820 | anion transport | No |
| GO:0015849 | organic acid transport | No |
| GO:0006810 | transport | No |
| GO:0031966 | mitochondrial membrane | No |
| GO:0019866 | organelle inner membrane | No |
| GO:0005575 | cellular_component | No |
| GO:0055085 | transmembrane transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 33 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 114 | 136 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g3533.t1 MSSSRVGLRFFQNTRAAFRNAYGPFRRPGAQGFRFQSSDAAAAEQQSTFQRLWNSPVGVKTVHFWAPVMKWALVI AGISDFSRPAEKLSLTQNGALMATGCIWTRWCMIITPKNYLLAAVNFFLGCVGVVQVGRIINYRRSVDGSTTAAV KDLEQEVADDAKAVATQAKAAVEKST* |
| Coding | >Ani_SJS72_1|g3533.t1 ATGTCGTCCTCCCGTGTTGGTCTTCGTTTCTTCCAGAACACCAGAGCTGCTTTCCGTAACGCATATGGCCCTTTC CGTCGGCCTGGTGCCCAGGGCTTCCGCTTCCAGAGCTCCGATGCTGCGGCCGCTGAGCAACAGAGCACTTTCCAG CGTCTATGGAACAGCCCGGTCGGTGTGAAGACGGTGCATTTCTGGGCCCCCGTTATGAAGTGGGCTCTTGTCATT GCCGGTATCTCCGACTTTAGCCGCCCTGCCGAGAAGCTGTCCCTTACTCAAAACGGTGCCTTGATGGCCACTGGT TGCATCTGGACTCGCTGGTGCATGATCATCACCCCCAAGAACTACCTGCTCGCTGCTGTCAACTTCTTCCTCGGA TGTGTCGGTGTTGTCCAGGTTGGCCGCATCATCAACTACCGCCGTAGCGTTGATGGCTCGACCACCGCCGCCGTG AAGGATCTGGAACAGGAGGTTGCCGACGACGCCAAGGCCGTTGCTACTCAGGCGAAGGCTGCAGTCGAGAAGTCT ACCTAA |
| Transcript | >Ani_SJS72_1|g3533.t1 ATGTCGTCCTCCCGTGTTGGTCTTCGTTTCTTCCAGAACACCAGAGCTGCTTTCCGTAACGCATATGGCCCTTTC CGTCGGCCTGGTGCCCAGGGCTTCCGCTTCCAGAGCTCCGATGCTGCGGCCGCTGAGCAACAGAGCACTTTCCAG CGTCTATGGAACAGCCCGGTCGGTGTGAAGACGGTGCATTTCTGGGCCCCCGTTATGAAGTGGGCTCTTGTCATT GCCGGTATCTCCGACTTTAGCCGCCCTGCCGAGAAGCTGTCCCTTACTCAAAACGGTGCCTTGATGGCCACTGGT TGCATCTGGACTCGCTGGTGCATGATCATCACCCCCAAGAACTACCTGCTCGCTGCTGTCAACTTCTTCCTCGGA TGTGTCGGTGTTGTCCAGGTTGGCCGCATCATCAACTACCGCCGTAGCGTTGATGGCTCGACCACCGCCGCCGTG AAGGATCTGGAACAGGAGGTTGCCGACGACGCCAAGGCCGTTGCTACTCAGGCGAAGGCTGCAGTCGAGAAGTCT ACCTAA |
| Gene | >Ani_SJS72_1|g3533.t1 ATGTCGTCCTCCCGTGTTGGTCTTCGTTTCTTCCAGAACACCAGAGCTGCTTTCCGTAACGCATATGGCCCTTTC CGTCGGCCTGGTGCCCAGGGCTTCCGCTTCCAGAGCTCCGATGCTGCGGCCGCTGAGCAACAGAGCACTTTCCAG CGTCTATGGAACAGCCCGGTCGGTGTGAAGACGGTGCATTTCTGGTGAGTCTAGACTCGGATATTATGCTATTGC ATTTGCTTTTTTCTTCTATCATGTGAACGTTTGCGTTGTACTGTATTTTAACATTGATGTGTCATAGGGCCCCCG TTATGAAGGTACGAAACCATGCACCGTGCTGAAACCCGTTCCTCGATCCAACTTCTTTGATTCGCGATAATCGTC CTACTATATCTTTGTGCTGTTCGACTGACTCAATCAGTGGGCTCTTGTCATTGCCGGTATCTCCGACTTTAGCCG CCCTGCCGAGAAGCTGTCCCTTACTCAAAACGGTGCCTTGATGGCCACTGGTTGCATCTGGACTCGCTGGTGCAT GATCATCACCCCCAAGAACTACCTGTACGCACACCAACCCCGATCTATGAATATTGTGGGAAAGAATACTGACTG GCTAGGCTCGCTGCTGTCAACTTCTTCCTCGGATGTGTCGGTGTTGTCCAGGTTGGCCGCATCATCAACTACCGC CGTAGCGTTGATGGCTCGACCACCGCCGCCGTGAAGGATCTGGAACAGGAGGTTGCCGACGACGCCAAGGCCGTT GCTACTCAGGCGAAGGCTGCAGTCGAGAAGTCTACCTAA |