Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g3529.t1
Gene name
Locationscaffold_020:45161..45654
Strand-
Gene length (bp)493
Transcript length (bp)351
Coding sequence length (bp)351
Protein length (aa) 117

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07960 CBP4 CBP4 2.2E-32 6 112

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g3529.t1
MSRAGTWMKMLGVGIVICVGGPAFVQYIRPTDEELFKRYNPDLQKRSLEEGDRRAREFDEYVTRLKQWSKSDKSI
WYAAQEQQEQKRVEAEVQRNQARDDAKVQREEMRKELLGEK*
Coding >Ani_SJS72_1|g3529.t1
ATGTCTCGGGCAGGAACTTGGATGAAGATGCTCGGCGTCGGCATCGTCATCTGTGTCGGCGGTCCGGCATTCGTC
CAATACATCCGTCCTACTGATGAAGAATTGTTCAAGCGTTACAACCCCGATCTTCAGAAGCGGAGTCTGGAGGAA
GGTGATCGCCGAGCTCGGGAATTCGATGAATATGTTACCCGGTTGAAGCAATGGTCCAAGTCCGATAAGTCGATT
TGGTACGCGGCTCAGGAACAACAGGAACAGAAGCGCGTGGAGGCTGAGGTACAACGGAACCAGGCCAGGGACGAT
GCTAAGGTACAACGTGAGGAGATGAGAAAGGAACTGCTGGGTGAGAAATAA
Transcript >Ani_SJS72_1|g3529.t1
ATGTCTCGGGCAGGAACTTGGATGAAGATGCTCGGCGTCGGCATCGTCATCTGTGTCGGCGGTCCGGCATTCGTC
CAATACATCCGTCCTACTGATGAAGAATTGTTCAAGCGTTACAACCCCGATCTTCAGAAGCGGAGTCTGGAGGAA
GGTGATCGCCGAGCTCGGGAATTCGATGAATATGTTACCCGGTTGAAGCAATGGTCCAAGTCCGATAAGTCGATT
TGGTACGCGGCTCAGGAACAACAGGAACAGAAGCGCGTGGAGGCTGAGGTACAACGGAACCAGGCCAGGGACGAT
GCTAAGGTACAACGTGAGGAGATGAGAAAGGAACTGCTGGGTGAGAAATAA
Gene >Ani_SJS72_1|g3529.t1
ATGTCTCGGGCAGGAACTTGGATGAAGATGCTCGGCGTGTAAGGCGCATCCACTCCCACCTCTTCCGTGCTTGCC
GCGCGATTTCTAACGGATAATTAGCGGCATCGTCATCTGTGTCGGCGGTCCGGCATTCGTCCAATACATCCGTCC
TACTGATGAAGAATTGTTCAAGCGTTACAACCCCGATCTTCAGAAGCGGAGTCTGGAGGAAGGTGATCGCCGAGC
TCGGGAATTCGATGAATATGTTACCCGGTTGAAGCAATGGTCCAAGTCCGATAAGTCGAGTGCGTTATGGCCTCT
TCCTGTCTTCCACCTCATGTCTTGGATGTTTGTGAGCAGTTATACTGATGTCATGGTTTGATTAGTTTGGTACGC
GGCTCAGGAACAACAGGAACAGAAGCGCGTGGAGGCTGAGGTACAACGGAACCAGGCCAGGGACGATGCTAAGGT
ACAACGTGAGGAGATGAGAAAGGAACTGCTGGGTGAGAAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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