Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g3528.t1
Gene name
Location	scaffold_020:42339..43004
Strand	-
Gene length (bp)	665
Transcript length (bp)	360
Coding sequence length (bp)	360
Protein length (aa)	120

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00957	Synaptobrevin	Synaptobrevin	4.2E-32	30	114

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 40	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	94	116	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g3528.t1 MSEQPYDPYIPSGANGAGAGASAAQNGDPRTREIDKKIQETVDTMRSNIFKVSERGERLDSLQDKTDNLATSAQG FRRGANRVRKQMWWKDMKMRVCLIVCIIILLIVIIVPAVVATKH*
Coding	>Ani_SJS72_1\|g3528.t1 ATGTCCGAGCAGCCCTATGATCCCTACATCCCCTCTGGCGCCAATGGGGCTGGCGCCGGCGCCAGCGCTGCGCAA AATGGCGACCCCAGGACACGGGAAATCGACAAAAAAATCCAAGAAACCGTTGACACAATGCGCTCCAACATCTTT AAAGTTTCAGAACGTGGTGAACGTCTAGATTCCCTCCAGGACAAGACGGACAATTTGGCAACATCAGCGCAGGGA TTCCGCAGAGGTGCCAACCGCGTGAGGAAGCAAATGTGGTGGAAGGATATGAAGATGCGCGTGTGCCTAATCGTT TGTATCATTATTCTGCTCATTGTGATTATCGTCCCTGCAGTTGTCGCCACCAAACATTAA
Transcript	>Ani_SJS72_1\|g3528.t1 ATGTCCGAGCAGCCCTATGATCCCTACATCCCCTCTGGCGCCAATGGGGCTGGCGCCGGCGCCAGCGCTGCGCAA AATGGCGACCCCAGGACACGGGAAATCGACAAAAAAATCCAAGAAACCGTTGACACAATGCGCTCCAACATCTTT AAAGTTTCAGAACGTGGTGAACGTCTAGATTCCCTCCAGGACAAGACGGACAATTTGGCAACATCAGCGCAGGGA TTCCGCAGAGGTGCCAACCGCGTGAGGAAGCAAATGTGGTGGAAGGATATGAAGATGCGCGTGTGCCTAATCGTT TGTATCATTATTCTGCTCATTGTGATTATCGTCCCTGCAGTTGTCGCCACCAAACATTAA
Gene	>Ani_SJS72_1\|g3528.t1 ATGTCCGAGCAGCCCTATGATCCCTACATCCCCTCTGGCGCCAATGGGGCTGGCGCCGGCGCCAGCGCTGCGCAA AATGGCGACCCCAGGACACGGGAAATCGACAAAGTAAGTTGCCGAAACGCCTCGCGGTCAACTTTTATCGTTCCA CAAGGATATGTCGCCCAGGTTGAATAGGATGTGATGGCTTTCCAGTTTTCATTTGGACTTCCATCTGAGTTCAAC TGGACTTGGAGGCCACCGGGTCTTTTTGAATCTTATTAAGCTTGTGTCTATTATGGCATTTGTCGCAAAGTATTT ACTAACGCTGTGTTTCTTCTCTGTCTAGAAAATCCAAGAAACCGTTGACACAATGCGCTCCAACATCTTTAAAGT TTCAGAACGTGGTGAACGTCTAGATTCCCTCCAGGACAAGACGGACAATTTGGCAACATCAGCGCAGGGATTCCG CAGAGGTGCCAACCGCGTGAGGAAGCAAATGTGGTGGAAGGATATGAAGATGCGCGTGTGCCTAATCGTTTGTAT CATTATTCTGCTCATTGTGATTATCGTCCCTGCAGGTAAGATCAGCGCTATCCTCCAGCACTCCACCAAGCTGGA CTCGGAAAAACATCCCGGAATGCGCTAACAGCTCTCTCCTTTCAGTTGTCGCCACCAAACATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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