Protein ID | Ani_SJS72_1|g3514.t1 |
Gene name | |
Location | scaffold_020:204..974 |
Strand | - |
Gene length (bp) | 770 |
Transcript length (bp) | 702 |
Coding sequence length (bp) | 702 |
Protein length (aa) | 234 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04145 | Ctr | Ctr copper transporter family | 7.2E-37 | 67 | 221 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005375 | copper ion transmembrane transporter activity | Yes |
GO:0016021 | integral component of membrane | Yes |
GO:0035434 | copper ion transmembrane transport | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0015075 | ion transmembrane transporter activity | No |
GO:0051179 | localization | No |
GO:0051234 | establishment of localization | No |
GO:0008150 | biological_process | No |
GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
GO:0022890 | inorganic cation transmembrane transporter activity | No |
GO:0031224 | intrinsic component of membrane | No |
GO:0098662 | inorganic cation transmembrane transport | No |
GO:0003674 | molecular_function | No |
GO:0006825 | copper ion transport | No |
GO:0098655 | cation transmembrane transport | No |
GO:0006812 | cation transport | No |
GO:0005215 | transporter activity | No |
GO:0008324 | cation transmembrane transporter activity | No |
GO:0046915 | transition metal ion transmembrane transporter activity | No |
GO:0046873 | metal ion transmembrane transporter activity | No |
GO:0034220 | ion transmembrane transport | No |
GO:0006810 | transport | No |
GO:0022857 | transmembrane transporter activity | No |
GO:0098660 | inorganic ion transmembrane transport | No |
GO:0000041 | transition metal ion transport | No |
GO:0030001 | metal ion transport | No |
GO:0005575 | cellular_component | No |
GO:0055085 | transmembrane transport | No |
GO:0006811 | ion transport | No |
GO:0009987 | cellular process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 32 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 87 | 109 | 22 |
2 | 184 | 206 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g3514.t1 MDMSSMTGMDMGTTSTTMSGMSMATTTAASASSTMDMSMGSSTSTSMSMPMSTSSSSSSSMSMSMSMVFMNAHDT PLFSNQWTPSSSGTYAGTCIFLIVLAIISRCLAAFKALMERRWLDAHVNRRYIAVAGKSTEAGRIDSDPESKEAS LITAQGVEEKVKVIRKAAREPLPWRFSTDLPRALLFLVITGVSYLLMLAVMTMNIGYFCSVLAGAFLGELAVGRF IQWNEHEH* |
Coding | >Ani_SJS72_1|g3514.t1 ATGGACATGAGCTCTATGACCGGTATGGACATGGGGACCACCTCCACTACCATGTCCGGCATGTCAATGGCTACC ACCACCGCTGCCTCCGCATCGTCCACTATGGACATGTCTATGGGCTCCTCCACCTCCACCTCTATGTCCATGCCC ATGTCCACCTCTTCCTCCTCTTCTTCTTCTATGTCTATGTCAATGTCAATGGTCTTCATGAACGCCCACGACACC CCCCTCTTCTCCAACCAATGGACCCCCTCGTCCAGCGGTACCTATGCCGGTACCTGCATCTTCCTCATCGTCCTC GCCATCATCTCCCGCTGTCTGGCCGCCTTCAAAGCCCTTATGGAACGCCGCTGGCTTGACGCCCACGTCAACCGT CGCTACATCGCCGTCGCAGGGAAATCCACCGAAGCGGGTCGCATTGACTCGGATCCTGAATCCAAAGAAGCCAGT CTCATCACAGCCCAAGGTGTCGAGGAGAAAGTCAAGGTCATCCGCAAAGCGGCGCGCGAACCACTCCCTTGGCGC TTCAGTACGGATCTTCCTCGCGCGCTGCTCTTTCTTGTCATCACGGGTGTCTCTTACCTACTGATGTTGGCCGTC ATGACCATGAACATCGGATACTTCTGCTCTGTCCTCGCCGGTGCCTTCCTGGGCGAGCTTGCCGTGGGACGCTTC ATTCAGTGGAACGAGCATGAACATTAG |
Transcript | >Ani_SJS72_1|g3514.t1 ATGGACATGAGCTCTATGACCGGTATGGACATGGGGACCACCTCCACTACCATGTCCGGCATGTCAATGGCTACC ACCACCGCTGCCTCCGCATCGTCCACTATGGACATGTCTATGGGCTCCTCCACCTCCACCTCTATGTCCATGCCC ATGTCCACCTCTTCCTCCTCTTCTTCTTCTATGTCTATGTCAATGTCAATGGTCTTCATGAACGCCCACGACACC CCCCTCTTCTCCAACCAATGGACCCCCTCGTCCAGCGGTACCTATGCCGGTACCTGCATCTTCCTCATCGTCCTC GCCATCATCTCCCGCTGTCTGGCCGCCTTCAAAGCCCTTATGGAACGCCGCTGGCTTGACGCCCACGTCAACCGT CGCTACATCGCCGTCGCAGGGAAATCCACCGAAGCGGGTCGCATTGACTCGGATCCTGAATCCAAAGAAGCCAGT CTCATCACAGCCCAAGGTGTCGAGGAGAAAGTCAAGGTCATCCGCAAAGCGGCGCGCGAACCACTCCCTTGGCGC TTCAGTACGGATCTTCCTCGCGCGCTGCTCTTTCTTGTCATCACGGGTGTCTCTTACCTACTGATGTTGGCCGTC ATGACCATGAACATCGGATACTTCTGCTCTGTCCTCGCCGGTGCCTTCCTGGGCGAGCTTGCCGTGGGACGCTTC ATTCAGTGGAACGAGCATGAACATTAG |
Gene | >Ani_SJS72_1|g3514.t1 ATGGACATGAGCTCTATGACCGGTATGGACATGGGGACCACCTCCACTACCATGTCCGGCATGTCAATGGCTACC ACCACCGCTGCCTCCGCATCGTCCACTATGGACATGTCTATGGGCTCCTCCACCTCCACCTCTATGTCCATGCCC ATGTCCACCTCTTCCTCCTCTTCTTCTTCTATGTCTATGTCAATGTCAATGGTCTTCATGAACGCCCACGACACC CCCCTCTTCTCCAACCAATGGACCCCCTCGTCCAGCGGTACCTATGCCGGTACCTGCATCTTCCTCATCGTCCTC GCCATCATCTCCCGCTGTCTGGCCGCCTTCAAAGCCCTTATGGAACGCCGCTGGCTTGACGCCCACGTCAACCGT CGCTACATCGCCGTCGCAGGGAAATCCACCGAAGCGGGTCGCATTGACTCGGATCCTGAATCCAAAGAAGCCAGT CTCATCACAGCCCAAGGTGTCGAGGAGAAAGTCAAGGTCATCCGCAAAGCGGCGCGCGAACCACTCCCTTGGCGC TTCAGTACGGATCTTCCTCGCGCGCTGCTCTTTCTTGTCATCACGGGTGTCTCTTACCTACTGTATGTTCCCATA CCCTCTACATCTAATAGATAGAAGAAAACCACATACTAATACAATTCAAACGCAGGATGTTGGCCGTCATGACCA TGAACATCGGATACTTCTGCTCTGTCCTCGCCGGTGCCTTCCTGGGCGAGCTTGCCGTGGGACGCTTCATTCAGT GGAACGAGCATGAACATTAG |