Fungal Genomics

Agaricus bisporus var bisporus H39 Agaricus bisporus var bisporus H97 Agaricus bisporus var burnettii H119p4 Aspergillus niger CBS 112.32 Aspergillus niger CBS 113.50 Aspergillus niger CBS 115988 Aspergillus niger CBS 115989 Aspergillus niger CBS 118.52 Aspergillus niger CBS 124.48 Aspergillus niger CBS 131.52 Aspergillus niger CBS 133816 Aspergillus niger CBS 147320 Aspergillus niger CBS 147321 Aspergillus niger CBS 147322 Aspergillus niger CBS 147323 Aspergillus niger CBS 147324 Aspergillus niger CBS 147343 Aspergillus niger CBS 147344 Aspergillus niger CBS 147345 Aspergillus niger CBS 147346 Aspergillus niger CBS 147347 Aspergillus niger CBS 147352 Aspergillus niger CBS 147353 Aspergillus niger CBS 147371 Aspergillus niger CBS 147482 Aspergillus niger CBS 630.78 Aspergillus niger CBS 769.97 Niveomyces coronatus CBS 149186 Ophiocordyceps australis 1348a (Ghana) Ophiocordyceps australis map64 (Brazil) Ophiocordyceps camponoti-floridani Ophiocordyceps camponoti-rufipedis Ophiocordyceps kimflemingae Ophiocordyceps subramaniannii Penicillium roqueforti DTO002I6 Penicillium roqueforti DTO003C3 Penicillium roqueforti DTO003H1 (CBS 147308) Penicillium roqueforti DTO006G1 Penicillium roqueforti DTO006G7 Penicillium roqueforti DTO012A1 Penicillium roqueforti DTO012A2 (CBS 147309) Penicillium roqueforti DTO012A6 (CBS 147310) Penicillium roqueforti DTO012A7 Penicillium roqueforti DTO012A8 Penicillium roqueforti DTO012A9 Penicillium roqueforti DTO013E5 Penicillium roqueforti DTO013F2 Penicillium roqueforti DTO013F5 (CBS 147311) Penicillium roqueforti DTO027I6 Penicillium roqueforti DTO032C6 Penicillium roqueforti DTO039G3 Penicillium roqueforti DTO046C5 Penicillium roqueforti DTO070G2 (CBS 147317) Penicillium roqueforti DTO081F9 (CBS 147318) Penicillium roqueforti DTO101D6 (CBS 147325) Penicillium roqueforti DTO102I9 (CBS 147326) Penicillium roqueforti DTO126G2 (CBS 147330) Penicillium roqueforti DTO127F7 (CBS 147331) Penicillium roqueforti DTO127F9 (CBS 147332) Penicillium roqueforti DTO130C1 (CBS 147333) Penicillium roqueforti DTO163C3 (CBS 147337) Penicillium roqueforti DTO163F5 (CBS 147338) Penicillium roqueforti DTO163G4 (CBS 147339) Penicillium roqueforti DTO265D5 (CBS 147372) Penicillium roqueforti DTO369A1 (CBS 147354) Penicillium roqueforti DTO375B1 (CBS 147355) Penicillium roqueforti DTO377G2 (LCP 96.3914a) Penicillium roqueforti LCP96 04111 Rhodonia placenta FPRL280 Torrubiellomyces zombiae CBS 149187

General Properties

Protein ID	Ani_SJS72_1|g3479.t1
Gene name
Location	scaffold_019:309766..313038
Strand	+
Gene length (bp)	3272
Transcript length (bp)	1725
Coding sequence length (bp)	1725
Protein length (aa)	575

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03878	YIF1	YIF1	2.2E-99	71	334
PF01929	Ribosomal_L14e	Ribosomal protein L14	1.8E-27	482	557
PF00467	KOW	KOW motif	4.6E-06	441	471

GO

GO Term	Description	Terminal node
GO:0003735	structural constituent of ribosome	Yes
GO:0005840	ribosome	Yes
GO:0006412	translation	Yes
GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	Yes
GO:0005789	endoplasmic reticulum membrane	Yes
GO:0110165	cellular anatomical entity	No
GO:0071704	organic substance metabolic process	No
GO:0043603	cellular amide metabolic process	No
GO:0043232	intracellular non-membrane-bounded organelle	No
GO:0003674	molecular_function	No
GO:0019538	protein metabolic process	No
GO:0009058	biosynthetic process	No
GO:0034645	cellular macromolecule biosynthetic process	No
GO:0009059	macromolecule biosynthetic process	No
GO:0051649	establishment of localization in cell	No
GO:0031090	organelle membrane	No
GO:1901566	organonitrogen compound biosynthetic process	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0044271	cellular nitrogen compound biosynthetic process	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0008152	metabolic process	No
GO:0008150	biological_process	No
GO:0051234	establishment of localization	No
GO:0051179	localization	No
GO:0043229	intracellular organelle	No
GO:0051641	cellular localization	No
GO:0048193	Golgi vesicle transport	No
GO:0005575	cellular_component	No
GO:0044237	cellular metabolic process	No
GO:0006807	nitrogen compound metabolic process	No
GO:0043228	non-membrane-bounded organelle	No
GO:0043226	organelle	No
GO:0043170	macromolecule metabolic process	No
GO:0044249	cellular biosynthetic process	No
GO:0044238	primary metabolic process	No
GO:0046907	intracellular transport	No
GO:0005198	structural molecule activity	No
GO:0006810	transport	No
GO:0006518	peptide metabolic process	No
GO:0016020	membrane	No
GO:0043604	amide biosynthetic process	No
GO:1901564	organonitrogen compound metabolic process	No
GO:0043043	peptide biosynthetic process	No
GO:0016192	vesicle-mediated transport	No
GO:1901576	organic substance biosynthetic process	No
GO:0009987	cellular process	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	173	192	19
2	202	224	22
3	237	259	22
4	263	285	22
5	321	340	19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1|g3479.t1 MYRQSFAPPPAQSPPLHHPVPQHVSTVPMMRSPPPPASQQPQTSGYGNPYQPAPAQGGSGTYAPGFGGFINDPTA QMGFQVGKTAMAAGQEYMEQNFNRYVSIPALKHYFNVSNSYVLNKLSLVLFPWRHKPWSRQQARLTTASTGPNGQ ISQQQYSSMFLPPRDDLNSPDMYIPVMALVTYILLSAMLAGFRGNFHPELLGSITTTAIAVILFEIMCLKLAMYI LSINNESQLLDLVAYSGYKFVGIIVTLLTSEILTPGRGTGGWVGWVVFIYTFLANAFFLLRSLKYVLLPDSTSDA SMRTGSMHTVARSQRNRRTQFLFIYSYVIQFVFINPGEGFTDTGSIANYRIISLVELTLGRTQTPLGGLLLAAKR DSCGRRAAAPKFAIQQTRATCAFRTTSTTRHFDNKLSTPSSRSLSTEAFAMADIDVQVAQWKLVEVGRVVLIRSG PYTGKLAAIVEIVDHKRVLVDGPSTEEQKIVPRHVLPLSHATLTHFVIPRLPRAAGTGPVKKLWQKEEIDGKWAK SNFAQKTERAERRKNLSDFERFKVLRLRKQARYEVQKAHAKLRAAAPKS*
Coding	>Ani_SJS72_1|g3479.t1 ATGTACCGCCAGTCGTTCGCTCCACCCCCAGCGCAGTCCCCTCCCCTTCACCATCCTGTGCCTCAGCATGTCTCG ACCGTCCCCATGATGCGCTCGCCGCCGCCTCCGGCATCACAACAGCCTCAGACTTCTGGCTATGGCAACCCATAC CAGCCCGCCCCTGCGCAGGGTGGCAGCGGAACCTATGCTCCTGGCTTCGGGGGGTTCATCAATGATCCCACCGCG CAGATGGGATTCCAGGTCGGAAAGACCGCCATGGCAGCTGGACAGGAATATATGGAGCAGAACTTCAATCGCTAT GTCTCTATACCAGCTCTAAAGCACTATTTCAACGTCTCGAATTCTTACGTCCTGAACAAATTGTCCCTCGTTCTC TTCCCTTGGCGGCACAAACCCTGGTCCCGTCAACAGGCGCGTCTTACAACAGCTTCAACTGGTCCCAATGGCCAG ATATCCCAGCAGCAGTACTCTTCCATGTTCCTCCCTCCGCGCGATGATCTCAACTCTCCAGACATGTATATCCCC GTCATGGCACTTGTCACATACATCCTTCTCTCAGCGATGTTGGCCGGATTCCGCGGTAACTTCCATCCGGAGCTG CTTGGTTCAATTACTACTACTGCTATCGCTGTCATACTGTTCGAGATAATGTGCTTGAAGCTGGCCATGTACATC CTCAGCATCAACAACGAGTCACAGCTGCTGGATTTGGTAGCATATTCGGGATACAAGTTTGTCGGCATCATCGTC ACTTTGTTGACATCTGAGATCCTCACTCCGGGCCGAGGAACCGGCGGCTGGGTTGGCTGGGTCGTCTTCATTTAC ACCTTCCTTGCTAATGCCTTCTTTCTGCTCCGTTCTCTGAAATACGTTCTGCTCCCGGACTCCACAAGTGATGCA TCCATGCGCACTGGTTCTATGCACACGGTTGCTCGCTCGCAGCGTAACCGTCGCACCCAGTTCCTGTTCATCTAC TCGTACGTTATCCAGTTCGTGTTCATAAACCCCGGCGAGGGCTTCACAGACACTGGGTCAATCGCAAATTACCGC ATCATCTCCCTGGTGGAGTTAACCCTAGGCCGCACGCAAACGCCCCTGGGTGGGCTGCTACTGGCTGCTAAGCGA GACTCTTGTGGGCGAAGGGCCGCAGCACCGAAATTCGCTATCCAGCAGACCAGAGCGACTTGTGCGTTTCGGACG ACTTCGACAACCCGACATTTCGACAACAAATTATCAACACCGTCCTCCCGGAGTCTGTCGACCGAAGCCTTCGCC ATGGCCGATATCGATGTTCAGGTTGCTCAATGGAAGCTGGTTGAGGTTGGCCGCGTTGTGCTGATCCGCAGCGGT CCTTACACCGGCAAGCTCGCTGCCATTGTTGAGATTGTCGACCACAAGCGTGTCTTGGTCGACGGTCCCTCCACC GAGGAGCAGAAGATCGTTCCCCGCCACGTCCTTCCTCTCTCCCACGCCACCCTCACTCACTTTGTCATCCCCCGT TTGCCCCGTGCTGCCGGTACTGGCCCCGTGAAGAAGCTTTGGCAGAAGGAGGAGATCGATGGCAAGTGGGCCAAG TCCAACTTCGCCCAGAAGACCGAGCGCGCTGAGCGCAGGAAGAACCTGTCCGACTTCGAGCGCTTCAAGGTCCTC CGCCTCCGGAAGCAGGCTCGCTACGAGGTCCAGAAGGCTCACGCTAAGCTCAGGGCGGCTGCTCCTAAGTCATAG
Transcript	>Ani_SJS72_1|g3479.t1 ATGTACCGCCAGTCGTTCGCTCCACCCCCAGCGCAGTCCCCTCCCCTTCACCATCCTGTGCCTCAGCATGTCTCG ACCGTCCCCATGATGCGCTCGCCGCCGCCTCCGGCATCACAACAGCCTCAGACTTCTGGCTATGGCAACCCATAC CAGCCCGCCCCTGCGCAGGGTGGCAGCGGAACCTATGCTCCTGGCTTCGGGGGGTTCATCAATGATCCCACCGCG CAGATGGGATTCCAGGTCGGAAAGACCGCCATGGCAGCTGGACAGGAATATATGGAGCAGAACTTCAATCGCTAT GTCTCTATACCAGCTCTAAAGCACTATTTCAACGTCTCGAATTCTTACGTCCTGAACAAATTGTCCCTCGTTCTC TTCCCTTGGCGGCACAAACCCTGGTCCCGTCAACAGGCGCGTCTTACAACAGCTTCAACTGGTCCCAATGGCCAG ATATCCCAGCAGCAGTACTCTTCCATGTTCCTCCCTCCGCGCGATGATCTCAACTCTCCAGACATGTATATCCCC GTCATGGCACTTGTCACATACATCCTTCTCTCAGCGATGTTGGCCGGATTCCGCGGTAACTTCCATCCGGAGCTG CTTGGTTCAATTACTACTACTGCTATCGCTGTCATACTGTTCGAGATAATGTGCTTGAAGCTGGCCATGTACATC CTCAGCATCAACAACGAGTCACAGCTGCTGGATTTGGTAGCATATTCGGGATACAAGTTTGTCGGCATCATCGTC ACTTTGTTGACATCTGAGATCCTCACTCCGGGCCGAGGAACCGGCGGCTGGGTTGGCTGGGTCGTCTTCATTTAC ACCTTCCTTGCTAATGCCTTCTTTCTGCTCCGTTCTCTGAAATACGTTCTGCTCCCGGACTCCACAAGTGATGCA TCCATGCGCACTGGTTCTATGCACACGGTTGCTCGCTCGCAGCGTAACCGTCGCACCCAGTTCCTGTTCATCTAC TCGTACGTTATCCAGTTCGTGTTCATAAACCCCGGCGAGGGCTTCACAGACACTGGGTCAATCGCAAATTACCGC ATCATCTCCCTGGTGGAGTTAACCCTAGGCCGCACGCAAACGCCCCTGGGTGGGCTGCTACTGGCTGCTAAGCGA GACTCTTGTGGGCGAAGGGCCGCAGCACCGAAATTCGCTATCCAGCAGACCAGAGCGACTTGTGCGTTTCGGACG ACTTCGACAACCCGACATTTCGACAACAAATTATCAACACCGTCCTCCCGGAGTCTGTCGACCGAAGCCTTCGCC ATGGCCGATATCGATGTTCAGGTTGCTCAATGGAAGCTGGTTGAGGTTGGCCGCGTTGTGCTGATCCGCAGCGGT CCTTACACCGGCAAGCTCGCTGCCATTGTTGAGATTGTCGACCACAAGCGTGTCTTGGTCGACGGTCCCTCCACC GAGGAGCAGAAGATCGTTCCCCGCCACGTCCTTCCTCTCTCCCACGCCACCCTCACTCACTTTGTCATCCCCCGT TTGCCCCGTGCTGCCGGTACTGGCCCCGTGAAGAAGCTTTGGCAGAAGGAGGAGATCGATGGCAAGTGGGCCAAG TCCAACTTCGCCCAGAAGACCGAGCGCGCTGAGCGCAGGAAGAACCTGTCCGACTTCGAGCGCTTCAAGGTCCTC CGCCTCCGGAAGCAGGCTCGCTACGAGGTCCAGAAGGCTCACGCTAAGCTCAGGGCGGCTGCTCCTAAGTCATAG
Gene	>Ani_SJS72_1|g3479.t1 ATGTACCGCCAGTCGTTCGCTCCACCCCCAGCGCAGTCCCCTCCCCTTCACCATCCTGTGCCTCAGCATGTCTCG ACCGTCCCCATGATGCGCTCGCCGCCGCCTCCGGCATCACAACAGCCTCAGACTTCTGGCTATGGCAACCCATAC CAGCCCGCCCCTGCGCAGGGTGGCAGCGGAACCTATGCTCCTGGCTTCGGGGGGTTCATCAATGATCCCACCGCG CAGATGGGATTCCAGGTCGGAAAGACCGCCATGGCAGCTGGACAGGAATATATGGAGCAGAACGTAAGCAGCAGC TTCAAGGATGTCTCTAAGATGAAAGATGCTAACCAGGCATGAAGTTCAATCGCTATGTCTCTATACCAGCTCTAA AGCACTATTTCAACGTCTCGAATTCTTACGTCCTGAACAAATTGTCCCTCGTTCTCTTCCCTTGGCGGCACAAAC CCTGGTCCCGTCAACAGGCGCGTCTTACAACAGCTTCAACTGGTCCCAATGGCCAGATATCCCAGCAGCAGTACT CTTCCATGTTCCTCCCTCCGCGCGATGATCTCAACTCTCCAGACATGTATATCCCCGTCATGGCACTTGTCACAT ACATCCTTCTCTCAGCGATGTTGGCCGGATTCCGCGGTAACTTCCATCCGGAGCTGCTTGGTTCAATTACTACTA CTGCTATCGCTGTCATACTGTTCGAGATAATGTGCTTGAAGCTGGCCATGTACATCCTCAGCATCAACAACGAGT CACAGCTGCTGGATTTGGTAGCATATTCGGGATACAAGTTTGTCGGCATCATCGTCACTTTGTTGACATCTGAGA TCCTCACTCCGGGCCGAGGAACCGGCGGCTGGGTTGGCTGGGTCGTCTTCATTTACACCTTCCTTGCTAATGCCT TCTTTCTGGTACGTTCATGGCCATGTGCTTTTTTGATGACTGTACTAATGGTGCCTCATAGCTCCGTTCTCTGAA ATACGTTCTGCTCCCGGACTCCACAAGTGATGCATCCATGCGCACTGGTTCTATGCACACGGTTGCTCGCTCGCA GCGTAACCGTCGCACCCAGTTCCTGTTCATCTACTCGTACGTTATCCAGTTCGTGTTCATGTGGGTTTTGAGTCG GGAGGGGCCGATGTCTATGGCTTCTAGTGGTGGAGCAACTGGTTCAGCATAGGGTCATGTCGGTACCGGGTTGCA CATAATGATATAGACGGACCTCATGAAAGGGAATAGGGATATTAGTTCATATTCATGTACGCTTTGTGGAGAGCA GTATAATTGATTTAGATTACAATTTTCTTAGATCAGGGATGTAATTGGTCACGTCGTGCTCCTGCATTATGCTAG GACATGAAGTCATACCGGATGGACGATAGCTACTGGTGAGACACGGTCACACCAGAACGGTGCGGGGCTATGCGG TGTTCCAGCAAGTCTACTTTTGTTTACAAGCACTACAAATTTCTAGAAACAGTCACAGATGATTGATCACAGAAC ATATATTAAATTTCAATATATCTCTAGCTAATGCCTTTATAGCGGCGCAATCGGAAGTCCTATAATCCCACGTTA GCATTTAGTCAAACAGGTAATGAGTGACAAAATTGCAGGATGAGATGCTCCTCAGAGATCTTGGTGATGAAGGAA ATTTCATTGCCAAAGGCATCAACTACTATCTAGGCGTGATAAAGTTTTTTAATCACTGGAGGGGGTGTGCAATCA AGGAAATGCAATCGCAACGTACCGAAAGAGCGCGCTGTTGGCAAGGGGAGTCGAGTGGCATGAAAGCGCAAACCT GCTTGATCTTCGACATGTTAGCGATGAGACTCCATGAGGAAGTATAGTGTCAAGATAACAAGGTAGAAATGAGAA TATCAGAATATGTAAGAAATTGAATATCATGCGTCAGTGCTGTATAGAAACCCCGGCGAGGGCTTCACAGACACT GGGTCAATCGCAAATTACCGCATCATGTGAGGGGGGTATATATTAAACAAGGTAAAAGGAAGGAGTAAAGAGCTT ACCAGTTAACGTGTGGAGAGTCAAGCTCCCTGGTGGAGTTAAGTTAGTAAACAAGATGGCGGAGTAGTTCTGGAC AGAACGACATTTTGTTCTGATGCAAGATGGCGAAAGGTCGACAGAGTCTGGACCTTTACAGTTCTGCAAGATAGC AAGAGGAACAAGCAAAGCAGATCGGGTTGAAAACTTGAAGCTTAAAAGCAACTCCATCGGAGCGGATAATATCCG ACCTCCGATGGAGCGCGCTAAGGCCGGGAGGCAGCCCTAGGCCGCACGCAAACGCCCCTGGGTGGGCTGCTACTG GCTGCTAAGCGAGACTCTTGTGGGCGAAGGGCCGCAGCACCGAAATTCGCTATCCAGCAGACCAGAGCGACTTGT GCGTTTCGGACGACTTCGACAACCCGACATTTCGACAACAAATTATCAACACCGTCCTCCCGGAGTCTGTCGACC GTGAGTTGCTGTCCGCCCTTACCGTGATCCCCGCAAGACTTCAACTAAGACGTCCCTTTTTGCTATTTTTCTAGG AAGCCTTCGCCATGGCCGATATCGATGTTCAGGTTGCTCAATGGAAGCTGGTTGAGGTTGGCCGCGTTGTGCTGA TCCGCAGCGGTCCTTACACCGGCAAGCTCGCTGCCATTGTTGAGATTGTCGACCACAAGCGTGTACGTTTTTGCG CATATACCGGAGTTGCTACGAGCGCGAAGGAATGGGATTTCTATTAGGAGGAAATGCGATATTGACAAAGAGTTC CACCGATTAGGTCTTGGTCGACGGTCCCTCCACCGAGGAGCAGAAGATCGTTCCCCGCCACGTCCTTCCTCTCTC CCACGCCACCCTCACTCACTTTGTCATCCCCCGTTTGCCCCGTGCTGCCGGTACTGGCCCCGTGAAGAAGCTTTG GCAGAAGGAGGAGATCGATGGCAAGTGGGCCAAGTCCAACTTCGCCCAGAAGACCGAGCGCGCTGAGCGCAGGAA GAACCTGTCCGACTTCGAGCGCTTCAAGGTCCTCCGCCTCCGGAAGCAGGTACGTTTGCGAATCGCGATGATGTG ACATGCACGGAAGATTGGGTTATATGGAGAAATCATATGAAAGTGGTCGGGACTATTGGTCGATTACTGGAAAAG AGCCGGGGACACTATGTGCATGGAGATTGCAGGAATAGGTGCTGACATTTTGGATTCAACAGGCTCGCTACGAGG TCCAGAAGGCTCACGCTAAGCTCAGGGCGGCTGCTCCTAAGTCATAG