Protein ID | Ani_SJS72_1|g346.t1 |
Gene name | |
Location | scaffold_002:27903..29418 |
Strand | + |
Gene length (bp) | 1515 |
Transcript length (bp) | 1380 |
Coding sequence length (bp) | 1380 |
Protein length (aa) | 460 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13692 | Glyco_trans_1_4 | Glycosyl transferases group 1 | 1.3E-07 | 308 | 423 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 18 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 4 | 23 | 19 |
2 | 111 | 133 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g346.t1 MIESLISVAFCLSTALTIGILLLPSRHESSSVTSQNAANEPKTTVQILVLGDIGRSPRMQYHALSVARNGGQVDM IGYHESDVHPEISSHPRISIVALPPHPSCLQTSNKLLFLLFGPLKVLFQIVCLFWILAYRTKPAKWLLVQNPPSI PTLAIASLVCFLRHTKLLIDWHNFGYTILALKLGNSHPLVRFSKLYEKIFCQYATAHLCVTNAMASVLKEEFALK APILPLHDRPADHFQPILDDRVRQDFLRSLSETETVRPIIGSDKLRVLVSSTSWTADEDFSLLIEALCRYSDLAE ASNPDLPSILAIITGKGPQREMYLKQIADLEKNGKLQKATIRTAWLSMEDYARLLASASLGVSLHTSSSGVDLPM KVVDMFGAGLPVVGWNCFEAWPELVTEGRNGRGFGSSDELVEHLVELFGNQEALEELRTGAREESSRRWDDEWNP VAGKLLGLV* |
Coding | >Ani_SJS72_1|g346.t1 ATGATCGAGTCGCTCATTAGCGTCGCGTTCTGTCTCTCTACGGCGCTTACTATCGGCATTCTCTTGCTGCCTTCG CGGCATGAGTCCAGCTCTGTCACTAGCCAAAATGCGGCAAATGAACCCAAGACGACTGTTCAGATTCTCGTGTTA GGGGATATTGGCCGTAGTCCGCGCATGCAGTACCATGCCCTTAGTGTTGCCAGAAATGGTGGTCAGGTGGACATG ATCGGCTATCATGAATCCGACGTGCATCCCGAGATTTCCTCCCATCCGAGAATATCCATTGTCGCCCTGCCTCCG CATCCATCCTGCCTTCAGACAAGCAACAAGCTCCTCTTCCTGTTGTTCGGTCCGCTGAAAGTTCTTTTTCAAATC GTCTGCTTGTTCTGGATCTTGGCATATCGTACAAAACCAGCCAAATGGCTTCTCGTACAGAATCCGCCTTCGATT CCCACGCTAGCGATCGCATCCCTCGTTTGCTTCTTGCGTCACACAAAGCTCCTCATTGATTGGCATAACTTCGGA TACACCATCCTGGCACTCAAACTCGGAAACTCCCATCCGCTGGTCAGATTCTCCAAATTATACGAGAAGATATTC TGCCAGTACGCGACGGCACACTTGTGTGTAACCAATGCAATGGCATCTGTTCTGAAAGAGGAGTTTGCCCTGAAG GCGCCCATTCTCCCGCTGCATGACCGACCAGCCGATCATTTTCAGCCCATCCTAGACGATCGCGTACGCCAGGAC TTCCTGCGCTCGTTGTCGGAGACGGAAACTGTCCGGCCCATTATTGGGTCTGACAAGCTTCGAGTTCTGGTTAGT TCGACCTCTTGGACAGCGGATGAGGACTTCTCGCTTCTCATAGAAGCTCTGTGTCGGTATTCGGACTTGGCCGAG GCATCAAACCCCGACCTACCTTCGATTCTGGCCATCATAACGGGAAAGGGGCCCCAGCGCGAGATGTATCTGAAA CAAATTGCCGATCTGGAGAAGAACGGTAAACTTCAAAAGGCCACCATTCGTACCGCTTGGCTAAGCATGGAAGAC TATGCACGATTGCTGGCATCCGCCTCGCTGGGTGTCAGTCTGCACACCAGCAGTAGCGGGGTAGATTTGCCCATG AAAGTCGTCGACATGTTCGGCGCTGGACTGCCCGTCGTTGGCTGGAATTGCTTCGAGGCGTGGCCGGAGCTGGTC ACTGAAGGTCGTAATGGACGAGGTTTTGGAAGCTCCGATGAACTTGTGGAACACCTTGTCGAACTCTTTGGAAAC CAGGAAGCACTCGAAGAACTTCGTACTGGGGCACGAGAGGAAAGTTCTCGTCGGTGGGATGACGAGTGGAACCCC GTAGCCGGAAAGCTGCTAGGCCTGGTATGA |
Transcript | >Ani_SJS72_1|g346.t1 ATGATCGAGTCGCTCATTAGCGTCGCGTTCTGTCTCTCTACGGCGCTTACTATCGGCATTCTCTTGCTGCCTTCG CGGCATGAGTCCAGCTCTGTCACTAGCCAAAATGCGGCAAATGAACCCAAGACGACTGTTCAGATTCTCGTGTTA GGGGATATTGGCCGTAGTCCGCGCATGCAGTACCATGCCCTTAGTGTTGCCAGAAATGGTGGTCAGGTGGACATG ATCGGCTATCATGAATCCGACGTGCATCCCGAGATTTCCTCCCATCCGAGAATATCCATTGTCGCCCTGCCTCCG CATCCATCCTGCCTTCAGACAAGCAACAAGCTCCTCTTCCTGTTGTTCGGTCCGCTGAAAGTTCTTTTTCAAATC GTCTGCTTGTTCTGGATCTTGGCATATCGTACAAAACCAGCCAAATGGCTTCTCGTACAGAATCCGCCTTCGATT CCCACGCTAGCGATCGCATCCCTCGTTTGCTTCTTGCGTCACACAAAGCTCCTCATTGATTGGCATAACTTCGGA TACACCATCCTGGCACTCAAACTCGGAAACTCCCATCCGCTGGTCAGATTCTCCAAATTATACGAGAAGATATTC TGCCAGTACGCGACGGCACACTTGTGTGTAACCAATGCAATGGCATCTGTTCTGAAAGAGGAGTTTGCCCTGAAG GCGCCCATTCTCCCGCTGCATGACCGACCAGCCGATCATTTTCAGCCCATCCTAGACGATCGCGTACGCCAGGAC TTCCTGCGCTCGTTGTCGGAGACGGAAACTGTCCGGCCCATTATTGGGTCTGACAAGCTTCGAGTTCTGGTTAGT TCGACCTCTTGGACAGCGGATGAGGACTTCTCGCTTCTCATAGAAGCTCTGTGTCGGTATTCGGACTTGGCCGAG GCATCAAACCCCGACCTACCTTCGATTCTGGCCATCATAACGGGAAAGGGGCCCCAGCGCGAGATGTATCTGAAA CAAATTGCCGATCTGGAGAAGAACGGTAAACTTCAAAAGGCCACCATTCGTACCGCTTGGCTAAGCATGGAAGAC TATGCACGATTGCTGGCATCCGCCTCGCTGGGTGTCAGTCTGCACACCAGCAGTAGCGGGGTAGATTTGCCCATG AAAGTCGTCGACATGTTCGGCGCTGGACTGCCCGTCGTTGGCTGGAATTGCTTCGAGGCGTGGCCGGAGCTGGTC ACTGAAGGTCGTAATGGACGAGGTTTTGGAAGCTCCGATGAACTTGTGGAACACCTTGTCGAACTCTTTGGAAAC CAGGAAGCACTCGAAGAACTTCGTACTGGGGCACGAGAGGAAAGTTCTCGTCGGTGGGATGACGAGTGGAACCCC GTAGCCGGAAAGCTGCTAGGCCTGGTATGA |
Gene | >Ani_SJS72_1|g346.t1 ATGATCGAGTCGCTCATTAGCGTCGCGTTCTGTCTCTCTACGGCGCTTACTATCGGCATTCTCTTGCTGCCTTCG CGGCATGAGTCCAGCTCTGTCACTAGCCAAAATGCGGCAAATGAACCCAAGACGACTGTTCAGATTCTCGTGTTA GGGGATATTGGCCGTAGTCCGCGCATGCAGTACCATGCCCTTAGTGTTGCCAGAAATGGTGGTCAGGTGGACATG ATCGGCTATCATGGTGCGCTAGAAGATGCGCCTTTGATTCTCACAAAGCTCCACGCTAATAAATTGCTATAGAAT CCGACGTGCATCCCGAGATTTCCTCCCATCCGAGAATATCCATTGTCGCCCTGCCTCCGCATCCATCCTGCCTTC AGACAAGCAACAAGCTCCTCTTCCTGTTGTTCGGTCCGCTGAAAGTTCTTTTTCAAATCGTCTGCTTGTTCTGGA TCTTGGCATATCGTACAAAACCAGCCAAATGGCTTCTCGTACAGGTTGGTTATTCCACGCCTTGTCCCCAATGCA TGGTACCATCGAAGCAGCGCTAAGTCCATCCTTTGCCCGTCACAGAATCCGCCTTCGATTCCCACGCTAGCGATC GCATCCCTCGTTTGCTTCTTGCGTCACACAAAGCTCCTCATTGATTGGCATAACTTCGGATACACCATCCTGGCA CTCAAACTCGGAAACTCCCATCCGCTGGTCAGATTCTCCAAATTATACGAGAAGATATTCTGCCAGTACGCGACG GCACACTTGTGTGTAACCAATGCAATGGCATCTGTTCTGAAAGAGGAGTTTGCCCTGAAGGCGCCCATTCTCCCG CTGCATGACCGACCAGCCGATCATTTTCAGCCCATCCTAGACGATCGCGTACGCCAGGACTTCCTGCGCTCGTTG TCGGAGACGGAAACTGTCCGGCCCATTATTGGGTCTGACAAGCTTCGAGTTCTGGTTAGTTCGACCTCTTGGACA GCGGATGAGGACTTCTCGCTTCTCATAGAAGCTCTGTGTCGGTATTCGGACTTGGCCGAGGCATCAAACCCCGAC CTACCTTCGATTCTGGCCATCATAACGGGAAAGGGGCCCCAGCGCGAGATGTATCTGAAACAAATTGCCGATCTG GAGAAGAACGGTAAACTTCAAAAGGCCACCATTCGTACCGCTTGGCTAAGCATGGAAGACTATGCACGATTGCTG GCATCCGCCTCGCTGGGTGTCAGTCTGCACACCAGCAGTAGCGGGGTAGATTTGCCCATGAAAGTCGTCGACATG TTCGGCGCTGGACTGCCCGTCGTTGGCTGGAATTGCTTCGAGGCGTGGCCGGAGCTGGTCACTGAAGGTCGTAAT GGACGAGGTTTTGGAAGCTCCGATGAACTTGTGGAACACCTTGTCGAACTCTTTGGAAACCAGGAAGCACTCGAA GAACTTCGTACTGGGGCACGAGAGGAAAGTTCTCGTCGGTGGGATGACGAGTGGAACCCCGTAGCCGGAAAGCTG CTAGGCCTGGTATGA |