© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g345.t1 |
| Gene name | |
| Location | scaffold_002:24288..27847 |
| Strand | - |
| Gene length (bp) | 3559 |
| Transcript length (bp) | 2607 |
| Coding sequence length (bp) | 2607 |
| Protein length (aa) | 869 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01545 | Cation_efflux | Cation efflux family | 7.0E-46 | 507 | 709 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0008324 | cation transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0051179 | localization | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0005575 | cellular_component | No |
| GO:0005215 | transporter activity | No |
| GO:0009987 | cellular process | No |
| GO:0006811 | ion transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 13 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 238 | 260 | 22 |
| 2 | 275 | 293 | 18 |
| 3 | 300 | 317 | 17 |
| 4 | 355 | 377 | 22 |
| 5 | 506 | 528 | 22 |
| 6 | 573 | 595 | 22 |
| 7 | 607 | 629 | 22 |
| 8 | 651 | 673 | 22 |
| 9 | 680 | 702 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g345.t1 MLDRLVRDAAQRMAIEGPVVPAKWGNSTSSEEGDKKHGDSSGGEDCQLYSGLNGGILGRSPTPLDAASKQIKRAA RPRIGRMHAMCLIVISAGKKQREILTWPVTGLIGAQSISSSIDSQPSTTQEVLSGLLLSLPWIILSWYHQQHALW QTTFSTSDETAASSLGSELLEQAASKTSMLTAVTMIVYGCGQLFRSIQRGGSDSEVTLPRMSSSAASAALLRVSS VALPIYATLKVGGFLVACGLLLPVASGLPTVIQGYGLHSSAQSRLSQKKVTAMLLVTIIALSLWGMNATRDPHPY LGYVSLLTSVFVLRLPFSGTPSASADLDYLTSNGAVSQKQSTKQDSGKLSSSDSILAVLSGIILALVTVVVSGNV SLKASNMMYQLAAAGALATSLIFVSPSHLRSPQKIGLMIGVGAAALLSSPPLQEKVHLAYVARAIATAASFLAAR FDDRQMRLSQHSHTHNHHHHAHSGADATKITRLIIQYSEPYPLLYSILKESDSRRIFYFMSLNFAFMLVQLSYGF MTGSLGLLSDSIHMFFDCLALVVGLCAAVMSKWPPSSRFPYGYGKVDTLSGFANGIFLMIISIEIIYEAVERLSS GSQMHRLGELLAVSVAGLLVNLVGIMAFDHGHAHGHDHSHGHSHGNENMHGIFLHILADTLGSVAVVISTILVHY SGWPGFDPIASCLIAILIFASAIPLVSSTAKTLLLTLPADIEYNVRETLAGVSTLRGVVGYTVPKFWLDDTGKES GHHHHHHDDHAHDHGCNHSHSHSHDHDHDHAHDHGHTHSHDHHFHSHDDHDHDHDHHDTHTPNVLGVIHVIASRS SDLEDVRQRTVDYLREKGMDILVQVEREGDGRCWCGGGGNKHS* |
| Coding | >Ani_SJS72_1|g345.t1 ATGCTGGACAGATTGGTTCGTGATGCAGCTCAGCGCATGGCCATTGAAGGGCCCGTAGTACCAGCGAAATGGGGA AATTCCACCAGCTCAGAGGAAGGAGATAAGAAGCACGGAGATAGCTCCGGAGGGGAGGATTGCCAGCTGTACTCC GGTTTGAACGGAGGAATCCTGGGCCGATCCCCAACCCCACTCGATGCCGCGTCAAAGCAAATCAAGCGCGCGGCT CGACCTCGGATTGGTAGGATGCATGCAATGTGCCTGATCGTGATTTCTGCAGGCAAAAAGCAACGCGAGATTCTG ACCTGGCCTGTGACGGGATTAATTGGAGCTCAATCGATTAGCTCTTCAATTGACTCTCAACCAAGCACGACTCAG GAAGTTCTCTCGGGCCTACTCCTCTCCCTGCCGTGGATCATTCTTTCCTGGTACCACCAACAACATGCGCTTTGG CAGACGACGTTTTCGACAAGCGATGAGACCGCTGCATCTAGCTTAGGAAGCGAACTCTTAGAGCAGGCTGCCAGC AAAACCTCCATGCTGACCGCCGTCACAATGATTGTATATGGATGTGGGCAATTATTTCGATCGATTCAACGAGGA GGGAGTGACTCGGAGGTTACACTGCCTCGAATGAGCTCCAGTGCGGCAAGCGCTGCTTTGCTCCGGGTGTCTTCT GTCGCATTGCCGATATATGCGACATTGAAGGTGGGAGGGTTCCTTGTCGCATGCGGCTTGTTGCTTCCTGTAGCG TCAGGTTTGCCGACCGTCATTCAAGGCTATGGCCTTCATAGCAGTGCACAGTCCCGGCTCAGCCAAAAGAAAGTA ACGGCCATGCTTCTCGTCACCATCATTGCTCTGAGCCTTTGGGGTATGAATGCGACGCGAGACCCCCACCCATAC CTGGGCTATGTCTCTCTGCTCACGTCGGTCTTCGTTCTTCGGCTCCCCTTTTCTGGGACTCCGTCCGCTTCTGCT GATCTTGATTACTTGACGTCCAATGGCGCAGTGTCCCAGAAACAATCTACAAAGCAGGACTCGGGCAAACTTTCG TCTAGTGATTCAATCCTGGCTGTCCTTTCAGGCATTATCCTGGCACTTGTTACTGTTGTTGTTTCTGGCAATGTG TCCCTGAAGGCTTCCAACATGATGTACCAACTCGCAGCTGCTGGAGCACTTGCAACAAGTCTCATATTCGTTTCC CCTTCCCATCTACGCTCACCACAAAAGATTGGTCTTATGATCGGTGTCGGAGCTGCCGCGCTCTTAAGCTCCCCG CCGCTGCAAGAGAAAGTCCACCTAGCTTATGTAGCTCGCGCCATTGCAACTGCCGCCTCGTTCCTTGCTGCCAGA TTCGATGACAGACAGATGCGCCTTTCACAACACTCTCATACCCATAATCACCATCATCATGCTCATTCTGGAGCT GATGCTACGAAGATAACGAGGCTCATCATCCAGTACAGCGAGCCTTATCCCCTTCTGTACAGTATTCTCAAGGAA AGCGATTCGCGACGTATCTTCTACTTCATGAGTCTTAATTTTGCCTTTATGCTTGTTCAGCTGTCCTATGGATTT ATGACTGGATCCCTGGGTCTTCTTAGTGACAGTATTCATATGTTCTTCGACTGCTTAGCGCTCGTGGTTGGTCTT TGTGCTGCTGTCATGAGTAAATGGCCCCCGAGCTCTCGGTTCCCCTACGGATATGGCAAAGTCGACACGCTTTCT GGGTTTGCCAACGGCATCTTCCTTATGATCATCAGCATTGAAATCATCTATGAAGCTGTCGAGCGACTTTCATCC GGCAGTCAGATGCATCGTCTCGGCGAACTACTGGCGGTGAGTGTTGCGGGTCTTCTCGTCAACCTTGTCGGAATC ATGGCATTCGATCATGGACACGCGCACGGCCACGATCACAGTCACGGGCACTCTCACGGAAACGAGAATATGCAC GGCATTTTCCTACACATTCTCGCCGACACTCTTGGCTCCGTGGCCGTTGTGATCTCGACCATCCTCGTGCACTAC TCTGGCTGGCCAGGGTTCGATCCAATTGCCTCTTGTCTCATTGCAATCTTAATTTTTGCCTCGGCAATCCCGCTT GTCAGCAGCACTGCGAAGACCCTGCTGCTCACCCTGCCAGCTGACATTGAATACAATGTCCGCGAAACCCTTGCT GGCGTTAGTACTTTACGGGGCGTTGTCGGGTACACCGTCCCAAAGTTCTGGCTGGACGATACGGGGAAGGAATCC GGCCACCATCACCATCATCACGACGACCATGCTCATGATCATGGATGCAACCACAGTCATAGCCATAGCCACGAT CACGATCACGATCATGCTCACGACCACGGCCATACTCACAGTCATGACCACCATTTCCACAGCCACGATGATCAC GATCACGATCACGATCACCATGACACGCATACTCCCAACGTCCTCGGCGTAATCCACGTCATCGCCTCTCGCAGC TCCGACCTCGAAGATGTCCGCCAACGCACCGTGGACTACCTCCGCGAGAAGGGCATGGACATTCTCGTTCAGGTC GAACGCGAAGGAGACGGCCGTTGTTGGTGCGGTGGCGGCGGGAATAAGCATTCTTGA |
| Transcript | >Ani_SJS72_1|g345.t1 ATGCTGGACAGATTGGTTCGTGATGCAGCTCAGCGCATGGCCATTGAAGGGCCCGTAGTACCAGCGAAATGGGGA AATTCCACCAGCTCAGAGGAAGGAGATAAGAAGCACGGAGATAGCTCCGGAGGGGAGGATTGCCAGCTGTACTCC GGTTTGAACGGAGGAATCCTGGGCCGATCCCCAACCCCACTCGATGCCGCGTCAAAGCAAATCAAGCGCGCGGCT CGACCTCGGATTGGTAGGATGCATGCAATGTGCCTGATCGTGATTTCTGCAGGCAAAAAGCAACGCGAGATTCTG ACCTGGCCTGTGACGGGATTAATTGGAGCTCAATCGATTAGCTCTTCAATTGACTCTCAACCAAGCACGACTCAG GAAGTTCTCTCGGGCCTACTCCTCTCCCTGCCGTGGATCATTCTTTCCTGGTACCACCAACAACATGCGCTTTGG CAGACGACGTTTTCGACAAGCGATGAGACCGCTGCATCTAGCTTAGGAAGCGAACTCTTAGAGCAGGCTGCCAGC AAAACCTCCATGCTGACCGCCGTCACAATGATTGTATATGGATGTGGGCAATTATTTCGATCGATTCAACGAGGA GGGAGTGACTCGGAGGTTACACTGCCTCGAATGAGCTCCAGTGCGGCAAGCGCTGCTTTGCTCCGGGTGTCTTCT GTCGCATTGCCGATATATGCGACATTGAAGGTGGGAGGGTTCCTTGTCGCATGCGGCTTGTTGCTTCCTGTAGCG TCAGGTTTGCCGACCGTCATTCAAGGCTATGGCCTTCATAGCAGTGCACAGTCCCGGCTCAGCCAAAAGAAAGTA ACGGCCATGCTTCTCGTCACCATCATTGCTCTGAGCCTTTGGGGTATGAATGCGACGCGAGACCCCCACCCATAC CTGGGCTATGTCTCTCTGCTCACGTCGGTCTTCGTTCTTCGGCTCCCCTTTTCTGGGACTCCGTCCGCTTCTGCT GATCTTGATTACTTGACGTCCAATGGCGCAGTGTCCCAGAAACAATCTACAAAGCAGGACTCGGGCAAACTTTCG TCTAGTGATTCAATCCTGGCTGTCCTTTCAGGCATTATCCTGGCACTTGTTACTGTTGTTGTTTCTGGCAATGTG TCCCTGAAGGCTTCCAACATGATGTACCAACTCGCAGCTGCTGGAGCACTTGCAACAAGTCTCATATTCGTTTCC CCTTCCCATCTACGCTCACCACAAAAGATTGGTCTTATGATCGGTGTCGGAGCTGCCGCGCTCTTAAGCTCCCCG CCGCTGCAAGAGAAAGTCCACCTAGCTTATGTAGCTCGCGCCATTGCAACTGCCGCCTCGTTCCTTGCTGCCAGA TTCGATGACAGACAGATGCGCCTTTCACAACACTCTCATACCCATAATCACCATCATCATGCTCATTCTGGAGCT GATGCTACGAAGATAACGAGGCTCATCATCCAGTACAGCGAGCCTTATCCCCTTCTGTACAGTATTCTCAAGGAA AGCGATTCGCGACGTATCTTCTACTTCATGAGTCTTAATTTTGCCTTTATGCTTGTTCAGCTGTCCTATGGATTT ATGACTGGATCCCTGGGTCTTCTTAGTGACAGTATTCATATGTTCTTCGACTGCTTAGCGCTCGTGGTTGGTCTT TGTGCTGCTGTCATGAGTAAATGGCCCCCGAGCTCTCGGTTCCCCTACGGATATGGCAAAGTCGACACGCTTTCT GGGTTTGCCAACGGCATCTTCCTTATGATCATCAGCATTGAAATCATCTATGAAGCTGTCGAGCGACTTTCATCC GGCAGTCAGATGCATCGTCTCGGCGAACTACTGGCGGTGAGTGTTGCGGGTCTTCTCGTCAACCTTGTCGGAATC ATGGCATTCGATCATGGACACGCGCACGGCCACGATCACAGTCACGGGCACTCTCACGGAAACGAGAATATGCAC GGCATTTTCCTACACATTCTCGCCGACACTCTTGGCTCCGTGGCCGTTGTGATCTCGACCATCCTCGTGCACTAC TCTGGCTGGCCAGGGTTCGATCCAATTGCCTCTTGTCTCATTGCAATCTTAATTTTTGCCTCGGCAATCCCGCTT GTCAGCAGCACTGCGAAGACCCTGCTGCTCACCCTGCCAGCTGACATTGAATACAATGTCCGCGAAACCCTTGCT GGCGTTAGTACTTTACGGGGCGTTGTCGGGTACACCGTCCCAAAGTTCTGGCTGGACGATACGGGGAAGGAATCC GGCCACCATCACCATCATCACGACGACCATGCTCATGATCATGGATGCAACCACAGTCATAGCCATAGCCACGAT CACGATCACGATCATGCTCACGACCACGGCCATACTCACAGTCATGACCACCATTTCCACAGCCACGATGATCAC GATCACGATCACGATCACCATGACACGCATACTCCCAACGTCCTCGGCGTAATCCACGTCATCGCCTCTCGCAGC TCCGACCTCGAAGATGTCCGCCAACGCACCGTGGACTACCTCCGCGAGAAGGGCATGGACATTCTCGTTCAGGTC GAACGCGAAGGAGACGGCCGTTGTTGGTGCGGTGGCGGCGGGAATAAGCATTCTTGA |
| Gene | >Ani_SJS72_1|g345.t1 ATGCTGGACAGATTGGTTCGTGATGCAGCTCAGCGCATGGCCATTGAAGGGCCCGTAGTACCAGCGAAATGGGGA AATTCCACCAGCTCAGAGGAAGGAGATAAGAAGCACGGAGATAGCTCCGGAGGGGAGGATTGCCAGCTGTACTCC GGTTTGAACGGAGGAATCCTGGGCCGATCCCCAACCCCACTCGATGCCGCGTCAAAGCAAATCAAGCGCGCGGCT CGACCTCGGATTGGTAGGATGCATGCAATGTGCCTGATCGTGATTTCTGCAGGCAAAAAGCAACGCGAGATTCTG ACCTGGCCGTGTCTGGAACAAGTTCCCTGACCTTCAGCAAGTCGCCCAAAGTAATTTGGTTTGGTTGGAGATTAA TCCATTCGGATCGAGGCCGGGCGATCAGCCCGCGGCCAGCCCAATCACGTGGCCCGGGGGTTATCGCGGGCAGCC GATCATTCAGTTGGCGGCGCGCATCTGGGGGCCATCCCATCCCCATTACTTGCCACAAGCGCCCGTCAAGCTGCC AACTCTTTGCCCAGTTGCTCCCAATTCCCCCTCTCCCCGGCGCTATGCCACCTCGTTTGCACCAGACTCCCGGCC GTTCATCTGCTTTGAGCTGCTAGAGCTCCAATCTTTGTCAAACTACCTCCTTGCTCCCTCCCTCCGAACGCTCGC CTTGTGCTCCCTCCGTGGTCAGTCGCCTCTCTTCACGAACCACTAGAGATCATGTCGACGGGGGCTCCTGTGTCC ACCGTGGATACGATTCCTCAGGTACATGGTCTAGGACATTCTCGTGGCCGCGGTCATTCGCGTGCATCTCGCCGG TCAAACGGTCCCATCTCCATCTCGGCTTCCTCCTTCGATGCCTCCTCGGCGCAACAACAGCCCCCACAGCCTCTA CCGACTACACAACACACCAATGGCCAAACTGTGAGCCCATCGTGGCCGGAGCACCATCACACACATTCCCACTCC CACTCCCACTCTCATTCTCATTCTCATTCTCAGTCTCATTCCCATTCCCATTCTCACTCACACTCAACTCATAAT GTGTGGGAACATGCCCATCACACGAGCCTCGGCTCCATCAATCACACTAAGAGCGATAGTGTGACGGGATTAATT GGAGCTCAATCGATTAGCTCTTCAATTGACTCTCAACCAAGCACGACGTAAGTGTTCTTTGACCTATTCACTGGG AACCGATCCTGACTCTACTCAGTCAGGAAGTTCTCTCGGGCCTACTCCTCTCCCTGCCGTGGATCATTCTTTCCT GGTACCACCAACAACATGCGCTTTGGCAGACGACGTTTTCGACAAGCGATGAGACCGCTGCATCTAGCTTAGGAA GCGAACTCTTAGAGCAGGCTGCCAGCAAAACCTCCATGCTGACCGCCGTCACAATGATTGTATATGGATGTGGGC AATTATTTCGATCGATTCAACGAGGAGGGAGTGACTCGGAGGTTACACTGCCTCGAATGAGCTCCAGTGCGGCAA GCGCTGCTTTGCTCCGGGTGTCTTCTGTCGCATTGCCGATATATGCGACATTGAAGGTGGGAGGGTTCCTTGTCG CATGCGGCTTGTTGCTTCCTGTAGCGTCAGGTTTGCCGACCGTCATTCAAGGCTATGGCCTTCATAGCAGTGCAC AGTCCCGGCTCAGCCAAAAGAAAGTAACGGCCATGCTTCTCGTCACCATCATTGCTCTGAGCCTTTGGGGTATGA ATGCGACGCGAGACCCCCACCCATACCTGGGCTATGTCTCTCTGCTCACGTCGGTCTTCGTTCTTCGGCTCCCCT TTTCTGGGACTCCGTCCGCTTCTGCTGATCTTGATTACTTGACGTCCAATGGCGCAGTGTCCCAGAAACAATCTA CAAAGCAGGACTCGGGCAAACTTTCGTCTAGTGATTCAATCCTGGCTGTCCTTTCAGGCATTATCCTGGCACTTG TTACTGTTGTTGTTTCTGGCAATGTGTCCCTGAAGGCTTCCAACATGATGTACCAACTCGCAGCTGCTGGAGCAC TTGCAACAAGTCTCATATTCGTTTCCCCTTCCCATCTACGCTCACCACAAAAGATTGGTCTTATGATCGGTGTCG GAGCTGCCGCGCTCTTAAGCTCCCCGCCGCTGCAAGAGAAAGTCCACCTAGCTTATGTAGCTCGCGCCATTGCAA CTGCCGCCTCGTTCCTTGCTGCCAGATTCGATGACAGACAGATGCGCCTTTCACAACACTCTCATACCCATAATC ACCATCATCATGCTCATTCTGGAGCTGATGCTACGAAGATAACGAGGCTCATCATCCAGTACAGCGAGCCTTATC CCCTTCTGTACAGTATTCTCAAGGAAAGCGATTCGCGACGTATCTTCTACTTCATGAGGTATTTCATTCGTTGCC TTATATCCGAGGTAGCATGAGACTAACTTAACTAGTCTTAATTTTGCCTTTATGCTTGTTCAGCTGTCCTATGGA TTTATGACTGGATCCCTGGGTCTTCTTAGTGACAGTATTCATATGTTCTTCGACTGCTTAGCGCTCGTGGTTGGT CTTTGTGCTGCTGTCATGAGTAAATGGCCCCCGAGCTCTCGGTTCCCCTACGGATATGGCAAAGTCGACACGCTT TCTGGGTTTGCCAACGGCATCTTCCTTATGTAAGTGCTGCTAGTAAGCACCTTGGGTGACCGTTCTAACAATCCA TAGGATCATCAGCATTGAAATCATCTATGAAGCTGTCGAGCGACTTTCATCCGGCAGTCAGATGCATCGTCTCGG CGAACTACTGGCGGTGAGTGTTGCGGGTCTTCTCGTCAACCTTGTCGGAATCATGGCATTCGATCATGGACACGC GCACGGCCACGATCACAGTCACGGGCACTCTCACGGAAACGAGAATATGCACGGCATTTTCCTACACATTCTCGC CGACACTCTTGGCTCCGTGGCCGTTGTGATCTCGACCATCCTCGTGCACTACTCTGGCTGGCCAGGGTTCGATCC AATTGCCTCTTGTCTCATTGCAATCTTAATTTTTGCCTCGGCAATCCCGCTTGTCAGCAGCACTGCGAAGACCCT GCTGCTCACCCTGCCAGCTGACATTGAATACAATGTCCGCGAAACCCTTGCTGGCGTTAGTACTTTACGGGGCGT TGTCGGGTACACCGTCCCAAAGTTCTGGCTGGACGATACGGGGAAGGAATCCGGCCACCATCACCATCATCACGA CGACCATGCTCATGATCATGGATGCAACCACAGTCATAGCCATAGCCACGATCACGATCACGATCATGCTCACGA CCACGGCCATACTCACAGTCATGACCACCATTTCCACAGCCACGATGATCACGATCACGATCACGATCACCATGA CACGCATACTCCCAACGTCCTCGGCGTAATCCACGTCATCGCCTCTCGCAGCTCCGACCTCGAAGATGTCCGCCA ACGCACCGTGGACTACCTCCGCGAGAAGGGCATGGACATTCTCGTTCAGGTCGAACGCGAAGGAGACGGCCGTTG TTGGTGCGGTGGCGGCGGGAATAAGCATTCTTGA |