Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g340.t1
Gene name
Locationscaffold_002:15063..16206
Strand+
Gene length (bp)1143
Transcript length (bp)1086
Coding sequence length (bp)1086
Protein length (aa) 362

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 14 0.5

Transmembrane Domains

Domain # Start End Length
1 27 49 22
2 124 146 22
3 156 178 22
4 199 221 22
5 241 263 22
6 328 350 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g340.t1
MTISSLVRRGVEAALEQPTPNQPTIHFAGWLSALFVFTVLAFIAIGFSVEYTYGMLVPTLAAIEDSNPDVYVRID
GNLDANKPVDANEPDAEPVIEAPPPMPITSKLRTTIQHLRARAGFLSRFRGLSMLVTYGIAQGLVFSIMPFSFNA
FFSQFIVGMISSVALANLQLAWVHIVISEPSPKRFYQRIPGFDAWKKIAPVVAFEHAVTNAAYYIPLVLISACNG
FKNIENPSGGDSPAKTLAGAATLVSLPALLSFVVSIPARAIFIRVAASMLPEEDESIVPFDRSFGGKVSPAIVGG
SGKLSIMDAWKTFDRPALLRFVKAIGKGFAIEVAVAVFFTTLLIVQVWAGAVTYGFAGNNA*
Coding >Ani_SJS72_1|g340.t1
ATGACCATCTCTTCCCTCGTCCGTCGAGGTGTGGAGGCCGCCTTGGAGCAGCCTACCCCGAACCAACCCACCATC
CATTTCGCAGGATGGCTGTCGGCTCTGTTCGTCTTCACGGTCCTGGCCTTTATCGCTATCGGGTTCTCGGTGGAG
TACACTTATGGAATGCTAGTCCCGACCCTCGCCGCCATCGAGGATTCCAACCCCGATGTCTATGTCCGAATTGAT
GGCAACCTTGACGCCAACAAGCCTGTTGATGCGAACGAGCCCGATGCCGAGCCTGTGATCGAAGCTCCCCCTCCG
ATGCCCATAACCAGCAAACTACGCACCACGATTCAGCACCTCCGTGCCCGTGCCGGTTTCCTCTCCCGCTTCCGT
GGCTTGAGCATGCTCGTCACTTATGGTATCGCACAAGGACTGGTCTTCTCGATCATGCCATTTTCTTTCAACGCA
TTTTTCTCTCAGTTCATTGTTGGCATGATCTCCAGCGTCGCATTGGCCAACCTGCAGCTGGCGTGGGTCCACATT
GTCATTTCCGAGCCTTCCCCCAAACGTTTCTACCAGCGGATCCCCGGTTTTGATGCCTGGAAGAAGATCGCTCCT
GTTGTTGCTTTCGAACACGCCGTTACCAATGCTGCATACTACATTCCCTTGGTCCTGATCAGCGCTTGCAACGGC
TTCAAGAACATTGAGAACCCGTCCGGTGGTGACTCCCCAGCCAAAACTCTCGCAGGCGCTGCTACGCTCGTCTCC
CTGCCTGCTCTTCTCTCTTTCGTGGTGTCTATCCCTGCCCGGGCTATCTTCATCCGCGTGGCTGCGTCTATGCTT
CCTGAGGAGGATGAGTCCATTGTGCCTTTCGATCGTTCCTTCGGGGGCAAGGTCTCCCCCGCCATTGTCGGGGGC
AGCGGCAAGCTGAGCATCATGGATGCTTGGAAGACCTTCGACCGGCCCGCTTTGCTTCGCTTCGTCAAGGCCATC
GGCAAAGGATTCGCTATTGAGGTTGCCGTGGCCGTGTTCTTCACCACTCTGCTGATTGTACAGGTTTGGGCTGGA
GCGGTGACCTATGGCTTCGCTGGGAACAACGCTTAG
Transcript >Ani_SJS72_1|g340.t1
ATGACCATCTCTTCCCTCGTCCGTCGAGGTGTGGAGGCCGCCTTGGAGCAGCCTACCCCGAACCAACCCACCATC
CATTTCGCAGGATGGCTGTCGGCTCTGTTCGTCTTCACGGTCCTGGCCTTTATCGCTATCGGGTTCTCGGTGGAG
TACACTTATGGAATGCTAGTCCCGACCCTCGCCGCCATCGAGGATTCCAACCCCGATGTCTATGTCCGAATTGAT
GGCAACCTTGACGCCAACAAGCCTGTTGATGCGAACGAGCCCGATGCCGAGCCTGTGATCGAAGCTCCCCCTCCG
ATGCCCATAACCAGCAAACTACGCACCACGATTCAGCACCTCCGTGCCCGTGCCGGTTTCCTCTCCCGCTTCCGT
GGCTTGAGCATGCTCGTCACTTATGGTATCGCACAAGGACTGGTCTTCTCGATCATGCCATTTTCTTTCAACGCA
TTTTTCTCTCAGTTCATTGTTGGCATGATCTCCAGCGTCGCATTGGCCAACCTGCAGCTGGCGTGGGTCCACATT
GTCATTTCCGAGCCTTCCCCCAAACGTTTCTACCAGCGGATCCCCGGTTTTGATGCCTGGAAGAAGATCGCTCCT
GTTGTTGCTTTCGAACACGCCGTTACCAATGCTGCATACTACATTCCCTTGGTCCTGATCAGCGCTTGCAACGGC
TTCAAGAACATTGAGAACCCGTCCGGTGGTGACTCCCCAGCCAAAACTCTCGCAGGCGCTGCTACGCTCGTCTCC
CTGCCTGCTCTTCTCTCTTTCGTGGTGTCTATCCCTGCCCGGGCTATCTTCATCCGCGTGGCTGCGTCTATGCTT
CCTGAGGAGGATGAGTCCATTGTGCCTTTCGATCGTTCCTTCGGGGGCAAGGTCTCCCCCGCCATTGTCGGGGGC
AGCGGCAAGCTGAGCATCATGGATGCTTGGAAGACCTTCGACCGGCCCGCTTTGCTTCGCTTCGTCAAGGCCATC
GGCAAAGGATTCGCTATTGAGGTTGCCGTGGCCGTGTTCTTCACCACTCTGCTGATTGTACAGGTTTGGGCTGGA
GCGGTGACCTATGGCTTCGCTGGGAACAACGCTTAG
Gene >Ani_SJS72_1|g340.t1
ATGACCATCTCTTCCCTCGTCCGTCGAGGTGTGGAGGCCGCCTTGGAGCAGCCTACCCCGAACCAACCCACCATC
CATTTCGCAGGATGGCTGTCGGCTCTGTTCGTCTTCACGGTCCTGGCCTTTATCGCTATCGGGTTCTCGGTAAGC
TGCATGCCGCTTATGAGCTGATTATCGACGGACACTGACGCGTAGTCTCAGGTGGAGTACACTTATGGAATGCTA
GTCCCGACCCTCGCCGCCATCGAGGATTCCAACCCCGATGTCTATGTCCGAATTGATGGCAACCTTGACGCCAAC
AAGCCTGTTGATGCGAACGAGCCCGATGCCGAGCCTGTGATCGAAGCTCCCCCTCCGATGCCCATAACCAGCAAA
CTACGCACCACGATTCAGCACCTCCGTGCCCGTGCCGGTTTCCTCTCCCGCTTCCGTGGCTTGAGCATGCTCGTC
ACTTATGGTATCGCACAAGGACTGGTCTTCTCGATCATGCCATTTTCTTTCAACGCATTTTTCTCTCAGTTCATT
GTTGGCATGATCTCCAGCGTCGCATTGGCCAACCTGCAGCTGGCGTGGGTCCACATTGTCATTTCCGAGCCTTCC
CCCAAACGTTTCTACCAGCGGATCCCCGGTTTTGATGCCTGGAAGAAGATCGCTCCTGTTGTTGCTTTCGAACAC
GCCGTTACCAATGCTGCATACTACATTCCCTTGGTCCTGATCAGCGCTTGCAACGGCTTCAAGAACATTGAGAAC
CCGTCCGGTGGTGACTCCCCAGCCAAAACTCTCGCAGGCGCTGCTACGCTCGTCTCCCTGCCTGCTCTTCTCTCT
TTCGTGGTGTCTATCCCTGCCCGGGCTATCTTCATCCGCGTGGCTGCGTCTATGCTTCCTGAGGAGGATGAGTCC
ATTGTGCCTTTCGATCGTTCCTTCGGGGGCAAGGTCTCCCCCGCCATTGTCGGGGGCAGCGGCAAGCTGAGCATC
ATGGATGCTTGGAAGACCTTCGACCGGCCCGCTTTGCTTCGCTTCGTCAAGGCCATCGGCAAAGGATTCGCTATT
GAGGTTGCCGTGGCCGTGTTCTTCACCACTCTGCTGATTGTACAGGTTTGGGCTGGAGCGGTGACCTATGGCTTC
GCTGGGAACAACGCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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