© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g3324.t1 |
| Gene name | |
| Location | scaffold_018:252892..254796 |
| Strand | - |
| Gene length (bp) | 1904 |
| Transcript length (bp) | 1689 |
| Coding sequence length (bp) | 1689 |
| Protein length (aa) | 563 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.0E-33 | 79 | 474 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 4.7E-09 | 334 | 530 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 18 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 73 | 95 | 22 |
| 2 | 141 | 163 | 22 |
| 3 | 170 | 189 | 19 |
| 4 | 199 | 221 | 22 |
| 5 | 228 | 250 | 22 |
| 6 | 289 | 311 | 22 |
| 7 | 331 | 353 | 22 |
| 8 | 368 | 390 | 22 |
| 9 | 397 | 419 | 22 |
| 10 | 429 | 451 | 22 |
| 11 | 458 | 480 | 22 |
| 12 | 495 | 517 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g3324.t1 MSLVQALHYEVTAPASSLSHPAVPSPLQSIPQTPADDTQDPLNDSLQRNVTPTAGQAVFERAPSVQITQSRRLAI TVLLLLANLVQMTVSFAGIAGGTLLGESLGAQESSATWVGASYAMTQGTFVLMSGRLGDVYGHRELLLAGGAWLS LCTLISAFCSNFYAFVAMRALAGLGGAFIMPNAVALIASTNPPGRVRNLSLGFFAASAPTGGYFGALSLGAFMEG TEWKWFFVFIAAIGIATFVPLWALSSRETLLDRHGKIDWIGSALGTSSLILFNFVWNQAPSVGWSTPYEIALLIT SVILFGAFLLWEKSGTDYPIMPLEIFKAPSILTLLLVVLLNYMAVGTLIWYQVLWLQDVWHWSPLHFAVGWTPFV ICATGAASLAAWLVPRFAAQWILAIGTITILISNALMATVPVHQTYWAQVFPSIVLFSFCPDFVYTAAQIIASNS VRRHQQGIAGSLIGALNLYGVSLGLGFAATIEDQIAKHSGRIMGYRAALYFGVGISAVALLLDVCFVRMVKDDRE GWNEEDRAADGTDADALEMTGQAAATGAQWPAAVERA* |
| Coding | >Ani_SJS72_1|g3324.t1 ATGTCCTTGGTGCAGGCCCTTCACTACGAGGTTACAGCTCCTGCGTCGTCGTTGTCGCATCCAGCGGTCCCGTCC CCTCTCCAATCCATCCCCCAAACTCCTGCAGACGATACCCAAGACCCGCTCAATGACTCTCTCCAGCGGAATGTG ACGCCCACGGCAGGCCAGGCCGTCTTTGAGCGAGCGCCTTCTGTCCAAATCACTCAATCCCGTCGGTTGGCCATC ACCGTGCTGCTGCTCCTGGCCAATCTTGTGCAGATGACTGTGAGTTTTGCTGGGATCGCGGGTGGAACTCTGCTA GGGGAGTCTCTAGGTGCTCAGGAGAGCTCTGCCACGTGGGTCGGCGCAAGTTATGCAATGACACAAGGGACCTTC GTTCTTATGAGCGGGCGATTGGGAGACGTCTACGGCCATCGAGAGCTTCTCCTGGCGGGCGGAGCATGGCTTAGT CTTTGTACCTTGATCAGCGCTTTCTGCAGCAACTTCTATGCGTTTGTCGCCATGCGGGCGCTCGCAGGCCTAGGA GGTGCCTTCATCATGCCTAATGCTGTGGCTCTGATTGCAAGCACCAATCCTCCAGGACGCGTGCGCAACCTCAGT TTGGGTTTCTTCGCTGCGTCGGCGCCAACCGGTGGCTATTTCGGGGCATTGTCCCTGGGTGCATTCATGGAAGGA ACAGAATGGAAATGGTTCTTCGTCTTCATAGCTGCCATTGGCATTGCCACCTTCGTCCCCTTGTGGGCATTGAGT TCACGAGAGACTCTCCTCGACAGACACGGAAAGATCGACTGGATAGGATCAGCACTGGGAACAAGTTCCCTGATC TTGTTCAACTTTGTCTGGAATCAAGCACCCAGCGTAGGATGGTCCACTCCCTACGAAATCGCCCTCCTAATCACA TCCGTCATCCTTTTTGGGGCCTTCCTTCTCTGGGAGAAAAGCGGCACAGACTACCCTATCATGCCGCTCGAGATC TTCAAGGCCCCATCAATCCTCACACTACTCCTCGTCGTCCTCCTCAACTACATGGCCGTCGGCACTTTGATCTGG TATCAGGTCCTCTGGCTCCAAGACGTCTGGCACTGGTCCCCCCTGCACTTCGCCGTCGGCTGGACCCCCTTCGTA ATCTGTGCCACGGGCGCAGCCTCCCTTGCGGCATGGCTCGTCCCTCGATTCGCAGCGCAATGGATCCTCGCCATC GGAACAATAACCATCCTGATCTCCAACGCACTAATGGCCACCGTCCCAGTGCACCAAACCTACTGGGCGCAGGTC TTCCCCTCCATCGTGCTTTTCTCATTCTGTCCGGACTTCGTCTACACCGCCGCGCAAATCATCGCCAGCAACTCC GTCCGTCGGCACCAGCAAGGCATTGCAGGTTCACTGATCGGCGCACTGAACCTCTACGGCGTTAGTCTAGGGTTG GGCTTTGCCGCTACAATCGAGGACCAGATCGCGAAACACTCCGGTCGGATAATGGGGTACCGGGCCGCTTTGTAC TTCGGGGTAGGGATCAGCGCGGTGGCATTACTGCTGGACGTGTGTTTTGTGCGGATGGTGAAGGATGATCGCGAA GGATGGAACGAGGAAGATCGCGCTGCTGATGGAACTGATGCTGATGCGCTTGAAATGACGGGACAGGCGGCGGCA ACTGGTGCACAGTGGCCTGCTGCGGTAGAGCGGGCGTGA |
| Transcript | >Ani_SJS72_1|g3324.t1 ATGTCCTTGGTGCAGGCCCTTCACTACGAGGTTACAGCTCCTGCGTCGTCGTTGTCGCATCCAGCGGTCCCGTCC CCTCTCCAATCCATCCCCCAAACTCCTGCAGACGATACCCAAGACCCGCTCAATGACTCTCTCCAGCGGAATGTG ACGCCCACGGCAGGCCAGGCCGTCTTTGAGCGAGCGCCTTCTGTCCAAATCACTCAATCCCGTCGGTTGGCCATC ACCGTGCTGCTGCTCCTGGCCAATCTTGTGCAGATGACTGTGAGTTTTGCTGGGATCGCGGGTGGAACTCTGCTA GGGGAGTCTCTAGGTGCTCAGGAGAGCTCTGCCACGTGGGTCGGCGCAAGTTATGCAATGACACAAGGGACCTTC GTTCTTATGAGCGGGCGATTGGGAGACGTCTACGGCCATCGAGAGCTTCTCCTGGCGGGCGGAGCATGGCTTAGT CTTTGTACCTTGATCAGCGCTTTCTGCAGCAACTTCTATGCGTTTGTCGCCATGCGGGCGCTCGCAGGCCTAGGA GGTGCCTTCATCATGCCTAATGCTGTGGCTCTGATTGCAAGCACCAATCCTCCAGGACGCGTGCGCAACCTCAGT TTGGGTTTCTTCGCTGCGTCGGCGCCAACCGGTGGCTATTTCGGGGCATTGTCCCTGGGTGCATTCATGGAAGGA ACAGAATGGAAATGGTTCTTCGTCTTCATAGCTGCCATTGGCATTGCCACCTTCGTCCCCTTGTGGGCATTGAGT TCACGAGAGACTCTCCTCGACAGACACGGAAAGATCGACTGGATAGGATCAGCACTGGGAACAAGTTCCCTGATC TTGTTCAACTTTGTCTGGAATCAAGCACCCAGCGTAGGATGGTCCACTCCCTACGAAATCGCCCTCCTAATCACA TCCGTCATCCTTTTTGGGGCCTTCCTTCTCTGGGAGAAAAGCGGCACAGACTACCCTATCATGCCGCTCGAGATC TTCAAGGCCCCATCAATCCTCACACTACTCCTCGTCGTCCTCCTCAACTACATGGCCGTCGGCACTTTGATCTGG TATCAGGTCCTCTGGCTCCAAGACGTCTGGCACTGGTCCCCCCTGCACTTCGCCGTCGGCTGGACCCCCTTCGTA ATCTGTGCCACGGGCGCAGCCTCCCTTGCGGCATGGCTCGTCCCTCGATTCGCAGCGCAATGGATCCTCGCCATC GGAACAATAACCATCCTGATCTCCAACGCACTAATGGCCACCGTCCCAGTGCACCAAACCTACTGGGCGCAGGTC TTCCCCTCCATCGTGCTTTTCTCATTCTGTCCGGACTTCGTCTACACCGCCGCGCAAATCATCGCCAGCAACTCC GTCCGTCGGCACCAGCAAGGCATTGCAGGTTCACTGATCGGCGCACTGAACCTCTACGGCGTTAGTCTAGGGTTG GGCTTTGCCGCTACAATCGAGGACCAGATCGCGAAACACTCCGGTCGGATAATGGGGTACCGGGCCGCTTTGTAC TTCGGGGTAGGGATCAGCGCGGTGGCATTACTGCTGGACGTGTGTTTTGTGCGGATGGTGAAGGATGATCGCGAA GGATGGAACGAGGAAGATCGCGCTGCTGATGGAACTGATGCTGATGCGCTTGAAATGACGGGACAGGCGGCGGCA ACTGGTGCACAGTGGCCTGCTGCGGTAGAGCGGGCGTGA |
| Gene | >Ani_SJS72_1|g3324.t1 ATGTCCTTGGTGCAGGCCCTTCACTACGAGGTTACAGCTCCTGCGTCGTCGTTGTCGCATCCAGCGGTCCCGTCC CCTCTCCAATCCATCCCCCAAACTCCTGCAGACGATACCCAAGACCCGCTCAATGACTCTCTCCAGCGGAATGTG ACGCCCACGGCAGGCCAGGCCGTCTTTGAGCGAGCGCCTTCTGTCCAAATCACTCAATCCCGTCGGTTGGCCATC ACCGTGCTGCTGCTCCTGGCCAATCTTGTGCAGGTAACGTATCCATCACATTCCTAGATTTTCCGCTGCTGAGGG ATGCCAGATGACTGTGAGTTTTGCTGGGATCGCGGGTGGAACTCTGCTAGGGGAGTCTCTAGGTGCTCAGGAGAG CTCTGCCACGTGGGTCGGCGCAAGTTATGCGTTAGTAGCAGCTGGAGCAACAAGAAGATAATCATGGTTACACTA ACTCTGTTTAGAATGACACAAGGGACCTTCGTTCTTATGAGCGGGCGATTGGGAGACGTCTACGGCCATCGAGAG CTTCTCCTGGCGGGCGGAGCATGGCTTAGTCTTTGTACCTTGATCAGCGCTTTCTGCAGCAACTTCTATGCGTTT GTCGCCATGCGGGCGCTCGCAGGCCTAGGAGGTGCCTTCATCATGCCTAATGCTGTGGCTCTGATTGCAAGCACC AATCCTCCAGGACGCGTGCGCAACCTCAGTTTGGGTTTCTTCGCTGCGTCGGCGCCAACCGGTGGCTATTTCGGG GCATTGTCCCTGGGTGCATTCATGGAAGGAACAGAATGGAAATGGTTCTTCGTCTTCATGTAGGTGGTAGTACCC TGCTGAATGGGATAGTACTAACGAAGTTGAACCATAGAGCTGCCATTGGCATTGCCACCTTCGTCCCCTTGTGGG CATTGAGTTCACGAGAGACTCTCCTCGACAGACACGGAAAGATCGACTGGATAGGATCAGCACTGGGAACAAGTT CCCTGATCTTGTTCAACTTTGTCTGGAAGTAAGCTAATTTCCGCCCGGAAGAAGACAAATCCATACTCACCACAC TCTACTGCAGTCAAGCACCCAGCGTAGGATGGTCCACTCCCTACGAAATCGCCCTCCTAATCACATCCGTCATCC TTTTTGGGGCCTTCCTTCTCTGGGAGAAAAGCGGCACAGACTACCCTATCATGCCGCTCGAGATCTTCAAGGCCC CATCAATCCTCACACTACTCCTCGTCGTCCTCCTCAACTACATGGCCGTCGGCACTTTGATCTGGTATCAGGTCC TCTGGCTCCAAGACGTCTGGCACTGGTCCCCCCTGCACTTCGCCGTCGGCTGGACCCCCTTCGTAATCTGTGCCA CGGGCGCAGCCTCCCTTGCGGCATGGCTCGTCCCTCGATTCGCAGCGCAATGGATCCTCGCCATCGGAACAATAA CCATCCTGATCTCCAACGCACTAATGGCCACCGTCCCAGTGCACCAAACCTACTGGGCGCAGGTCTTCCCCTCCA TCGTGCTTTTCTCATTCTGTCCGGACTTCGTCTACACCGCCGCGCAAATCATCGCCAGCAACTCCGTCCGTCGGC ACCAGCAAGGCATTGCAGGTTCACTGATCGGCGCACTGAACCTCTACGGCGTTAGTCTAGGGTTGGGCTTTGCCG CTACAATCGAGGACCAGATCGCGAAACACTCCGGTCGGATAATGGGGTACCGGGCCGCTTTGTACTTCGGGGTAG GGATCAGCGCGGTGGCATTACTGCTGGACGTGTGTTTTGTGCGGATGGTGAAGGATGATCGCGAAGGATGGAACG AGGAAGATCGCGCTGCTGATGGAACTGATGCTGATGCGCTTGAAATGACGGGACAGGCGGCGGCAACTGGTGCAC AGTGGCCTGCTGCGGTAGAGCGGGCGTGA |