© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g3311.t1 |
| Gene name | |
| Location | scaffold_018:203310..204973 |
| Strand | + |
| Gene length (bp) | 1663 |
| Transcript length (bp) | 1200 |
| Coding sequence length (bp) | 1200 |
| Protein length (aa) | 400 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05653 | Mg_trans_NIPA | Magnesium transporter NIPA | 4.7E-103 | 5 | 293 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0015095 | magnesium ion transmembrane transporter activity | Yes |
| GO:0015693 | magnesium ion transport | Yes |
| GO:0006812 | cation transport | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0051179 | localization | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0022890 | inorganic cation transmembrane transporter activity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0008324 | cation transmembrane transporter activity | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0046873 | metal ion transmembrane transporter activity | No |
| GO:0006810 | transport | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0030001 | metal ion transport | No |
| GO:0005575 | cellular_component | No |
| GO:0006811 | ion transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 26 | 19 |
| 2 | 75 | 97 | 22 |
| 3 | 104 | 123 | 19 |
| 4 | 138 | 160 | 22 |
| 5 | 173 | 195 | 22 |
| 6 | 210 | 229 | 19 |
| 7 | 242 | 264 | 22 |
| 8 | 269 | 291 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g3311.t1 MLSEKYIGLILAITSTMAIGTSFVITKKGLMQASERHGFEGEGFSYLKSPIWWGGVVTLAVGEIANFAAYAFAPA ILVTPLGALSVLIGAVLGSYFLKERLGTLGKLGCAMCLLGSVVIVLHAPPDKPVERIDEILGYALQPGFLIYCLA VAIFSTVMIYRVAPVYGRKNPLIYISICSTVGSVSVMSIKAFGIAVKLTLGGNNQFTQASTYVFMIVTGFCILTQ MNYINKALNQFSTSIVNPLYYVTFTTATLCASFILFKGFNTTDAVNTISLLCGFLIIFSGVYLLNLSRHDPDGRQ MLNAKLDDEGIPTDGIAGFQTRRSMQSRRSNEPHRRSSSGTYMNGHGDREGLMRAYDVESQAFGLSDLAGDSDGE PGPTYKRSEEVDHSSHQPNKTSAL* |
| Coding | >Ani_SJS72_1|g3311.t1 ATGCTCTCCGAGAAGTATATCGGCCTCATTTTGGCCATTACATCAACAATGGCGATCGGTACAAGTTTCGTCATT ACGAAAAAGGGCTTGATGCAAGCATCCGAGAGGCATGGTTTTGAAGGAGAGGGTTTCTCATATCTCAAGAGTCCC ATATGGTGGGGAGGAGTGGTTACATTGGCCGTTGGAGAGATCGCCAATTTCGCAGCCTACGCTTTCGCACCCGCT ATCCTCGTCACGCCCTTGGGTGCGCTAAGTGTCCTGATCGGTGCTGTCCTTGGATCGTATTTCCTCAAGGAAAGA CTGGGTACACTTGGGAAGCTAGGTTGTGCGATGTGCCTCCTTGGCTCCGTCGTCATCGTCCTTCATGCGCCCCCA GACAAGCCAGTCGAGAGAATTGATGAGATCTTGGGCTACGCGCTGCAACCAGGATTTCTAATTTACTGCCTCGCC GTTGCCATCTTCTCTACCGTCATGATTTACCGCGTCGCTCCCGTCTACGGCAGAAAGAACCCTCTGATTTACATC TCCATCTGTTCCACAGTCGGCTCCGTCTCAGTCATGTCGATCAAGGCATTTGGTATTGCGGTGAAACTCACCTTG GGAGGCAACAACCAGTTCACACAGGCCTCGACCTACGTTTTCATGATCGTCACGGGTTTCTGCATTTTGACTCAG ATGAACTACATCAACAAGGCGCTGAACCAATTTTCTACCTCAATCGTTAACCCTCTCTACTATGTCACATTTACG ACTGCGACCCTGTGTGCCTCATTTATCCTTTTCAAGGGATTTAACACCACTGACGCTGTCAACACGATCTCCTTG CTCTGTGGATTTTTGATCATCTTCTCCGGCGTATATCTTCTGAATCTCTCCCGGCACGACCCAGATGGACGACAG ATGCTCAACGCGAAACTTGACGATGAGGGAATTCCAACGGACGGAATTGCCGGATTCCAGACTCGGAGGTCTATG CAGTCCCGTCGCAGCAACGAGCCTCATCGTCGGAGCTCCTCGGGGACCTACATGAACGGGCACGGAGACCGTGAA GGGCTTATGCGTGCCTATGATGTGGAGAGCCAGGCATTCGGGCTGTCCGACCTAGCCGGGGACAGTGACGGAGAG CCAGGTCCTACTTACAAGCGAAGTGAAGAAGTAGATCATTCTTCTCATCAGCCCAACAAGACTTCCGCACTATAG |
| Transcript | >Ani_SJS72_1|g3311.t1 ATGCTCTCCGAGAAGTATATCGGCCTCATTTTGGCCATTACATCAACAATGGCGATCGGTACAAGTTTCGTCATT ACGAAAAAGGGCTTGATGCAAGCATCCGAGAGGCATGGTTTTGAAGGAGAGGGTTTCTCATATCTCAAGAGTCCC ATATGGTGGGGAGGAGTGGTTACATTGGCCGTTGGAGAGATCGCCAATTTCGCAGCCTACGCTTTCGCACCCGCT ATCCTCGTCACGCCCTTGGGTGCGCTAAGTGTCCTGATCGGTGCTGTCCTTGGATCGTATTTCCTCAAGGAAAGA CTGGGTACACTTGGGAAGCTAGGTTGTGCGATGTGCCTCCTTGGCTCCGTCGTCATCGTCCTTCATGCGCCCCCA GACAAGCCAGTCGAGAGAATTGATGAGATCTTGGGCTACGCGCTGCAACCAGGATTTCTAATTTACTGCCTCGCC GTTGCCATCTTCTCTACCGTCATGATTTACCGCGTCGCTCCCGTCTACGGCAGAAAGAACCCTCTGATTTACATC TCCATCTGTTCCACAGTCGGCTCCGTCTCAGTCATGTCGATCAAGGCATTTGGTATTGCGGTGAAACTCACCTTG GGAGGCAACAACCAGTTCACACAGGCCTCGACCTACGTTTTCATGATCGTCACGGGTTTCTGCATTTTGACTCAG ATGAACTACATCAACAAGGCGCTGAACCAATTTTCTACCTCAATCGTTAACCCTCTCTACTATGTCACATTTACG ACTGCGACCCTGTGTGCCTCATTTATCCTTTTCAAGGGATTTAACACCACTGACGCTGTCAACACGATCTCCTTG CTCTGTGGATTTTTGATCATCTTCTCCGGCGTATATCTTCTGAATCTCTCCCGGCACGACCCAGATGGACGACAG ATGCTCAACGCGAAACTTGACGATGAGGGAATTCCAACGGACGGAATTGCCGGATTCCAGACTCGGAGGTCTATG CAGTCCCGTCGCAGCAACGAGCCTCATCGTCGGAGCTCCTCGGGGACCTACATGAACGGGCACGGAGACCGTGAA GGGCTTATGCGTGCCTATGATGTGGAGAGCCAGGCATTCGGGCTGTCCGACCTAGCCGGGGACAGTGACGGAGAG CCAGGTCCTACTTACAAGCGAAGTGAAGAAGTAGATCATTCTTCTCATCAGCCCAACAAGACTTCCGCACTATAG |
| Gene | >Ani_SJS72_1|g3311.t1 ATGCTCTCCGAGAAGTATGATGCGACCTGTCTCCAATCTTGGCCCGTTGGGACCATCATCGGATTCGCAATGTAC TGACCGTGCGTAGGTATATCGGCCTCATTTTGGCCATTACATCAACAATGGCGATCGGTATGAGTCTTCCGTAAT GGATTCGTTTTCTGCAGAAGCTGACAAGTATTAGGTACAAGTTTCGTCATTACGAAAAAGGTTCGTTCGTGTCCA ATCGTCGTCGATGACCAGCCGCGCGGAATTGCCTCTCGACGATTTTACCGATCTTCGTCTCGAATAAACGACTGA TTTCTATCATACAGGGCTTGATGCAAGCATCCGAGAGGCATGGTTTTGAAGGAGAGGGTTTCTCATATCTCAAGA GTCCCATATGGTGGGGAGGAGTGGTTACATGTATGACAGGCTCTGTTCTATCGACTGTCGCTTGAACAAGCGGAG CTGACTGGTGATGATGTAGTGGCCGTTGGAGAGATCGCCAATTTCGCAGCCTACGCTTTCGCACCCGCTATCCTC GTCACGCCCTTGGGTGCGCTAAGTGTCCTGATCGGGTGAGACTCCCCATCACGGGCCGAAGTTACTATACAATGG GCTAACAGGCCATAGTGCTGTCCTTGGATCGTATTTCCTCAAGGAAAGACTGGGTACACTTGGGAAGCTAGGTTG TGCGATGTGCCTCCTTGGCTCCGTCGTCATCGTCCTTCATGCGCCCCCAGACAAGCCAGTCGAGAGAATTGATGA GATCTTGGGCTACGCGCTGCAACCAGGTATGGACCGATACATTTAATTACAAACTCCCGTTGTCACCTAACACCA TTCTCCCATAGGATTTCTAATTTACTGCCTCGCCGTTGCCATCTTCTCTACCGTCATGATTTACCGCGTCGCTCC CGTCTACGGCAGAAAGAACCCTCTGATTTACATCTCCATCTGTTCCACAGTCGGCTCCGTCTCAGTCATGTCGAT CAAGGCATTTGGTATTGCGGTGAAACTCACCTTGGGAGGCAACAACCAGTTCACACAGGCCTCGACCTACGTTTT CATGATCGTCACGGGTTTCTGCATTTTGACTCAGATGAACTACATCAACAAGGCGCTGAACCAATTTTCTACCTC AATGTAGGTGCATGCCGAGCTTGCAAGCCGTGGATGATTGCTAACAATGTTTGGCAGCGTTAACCCTCTCTACTA TGTCACATTTACGACTGCGACCCTGTGTGCCTCATTTATCCTTTTCAAGGGATTTAACACCACTGACGCTGTCAA CACGATCTCCTTGCTCTGTGGATTTTTGATCATCTTCTCCGGCGTATATCTTCTGAATCTCTCCCGGCACGACCC AGATGGACGACAGATGCTCAACGCGAAACTTGACGATGAGGGAATTCCAACGGACGGAATTGCCGGATTCCAGAC TCGGAGGTCTATGCAGTCCCGTCGCAGCAACGAGCCTCATCGTCGGAGCTCCTCGGGGACCTACATGAACGGGCA CGGAGACCGTGAAGGGCTTATGCGTGCCTATGATGTGGAGAGCCAGGCATTCGGGCTGTCCGACCTAGCCGGGGA CAGTGACGGAGAGCCAGGTCCTACTTACAAGCGAAGTGAAGAAGTAGATCATTCTTCTCATCAGCCCAACAAGAC TTCCGCACTATAG |