Protein ID | Ani_SJS72_1|g328.t1 |
Gene name | |
Location | scaffold_001:950163..950928 |
Strand | - |
Gene length (bp) | 765 |
Transcript length (bp) | 540 |
Coding sequence length (bp) | 540 |
Protein length (aa) | 180 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04061 | ORMDL | ORMDL family | 1.9E-59 | 35 | 169 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016021 | integral component of membrane | Yes |
GO:0005789 | endoplasmic reticulum membrane | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0016020 | membrane | No |
GO:0005575 | cellular_component | No |
GO:0031224 | intrinsic component of membrane | No |
GO:0031090 | organelle membrane | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 70 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 47 | 66 | 19 |
2 | 81 | 103 | 22 |
3 | 124 | 142 | 18 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g328.t1 MAQGKAGRRRRSSSIIYQEPPESIEHTSDQAALPNLNANWVNAKGAWTIHFVLIIALKILFDIIPGVSQETSWTL TNISYMFGSFLMFHWVRGIPFEFNAGAYDNLNMWEQIDNGDQYTPTKKFLLCVPICLFLLSTHYTHYDLTYFTIN FLATLGVVIPKLPFSHRLRIGLFSDIPEE* |
Coding | >Ani_SJS72_1|g328.t1 ATGGCCCAGGGCAAGGCTGGACGGAGGAGACGGTCGAGTAGTATCATCTACCAAGAGCCCCCCGAATCCATTGAG CACACCAGCGACCAGGCTGCTCTGCCCAATTTGAATGCGAACTGGGTCAACGCCAAGGGAGCCTGGACCATCCAC TTCGTTCTCATCATCGCCCTCAAGATCTTGTTCGACATCATTCCCGGTGTCTCGCAGGAGACTTCATGGACACTC ACCAACATCAGCTACATGTTCGGTTCTTTCCTCATGTTCCACTGGGTGCGGGGCATCCCTTTTGAATTCAACGCC GGCGCGTACGACAACCTCAACATGTGGGAGCAGATCGACAATGGAGATCAGTATACGCCCACAAAGAAGTTCCTC CTCTGCGTGCCCATTTGTCTCTTCCTGCTTAGCACACATTATACCCACTACGACTTGACGTATTTCACCATCAAT TTCCTTGCAACCCTGGGAGTTGTCATCCCGAAATTGCCGTTTTCGCACCGTCTGCGAATAGGTCTCTTCTCTGAT ATACCCGAAGAGTAG |
Transcript | >Ani_SJS72_1|g328.t1 ATGGCCCAGGGCAAGGCTGGACGGAGGAGACGGTCGAGTAGTATCATCTACCAAGAGCCCCCCGAATCCATTGAG CACACCAGCGACCAGGCTGCTCTGCCCAATTTGAATGCGAACTGGGTCAACGCCAAGGGAGCCTGGACCATCCAC TTCGTTCTCATCATCGCCCTCAAGATCTTGTTCGACATCATTCCCGGTGTCTCGCAGGAGACTTCATGGACACTC ACCAACATCAGCTACATGTTCGGTTCTTTCCTCATGTTCCACTGGGTGCGGGGCATCCCTTTTGAATTCAACGCC GGCGCGTACGACAACCTCAACATGTGGGAGCAGATCGACAATGGAGATCAGTATACGCCCACAAAGAAGTTCCTC CTCTGCGTGCCCATTTGTCTCTTCCTGCTTAGCACACATTATACCCACTACGACTTGACGTATTTCACCATCAAT TTCCTTGCAACCCTGGGAGTTGTCATCCCGAAATTGCCGTTTTCGCACCGTCTGCGAATAGGTCTCTTCTCTGAT ATACCCGAAGAGTAG |
Gene | >Ani_SJS72_1|g328.t1 ATGGCCCAGGGCAAGGCTGGACGGAGGAGACGGTCGAGTAGTATCATCTACCAAGAGCCCCCCGAATCCATTGAG CACACCAGCGACCAGGCTGCTCTGCCCAATTTGAATGCGAACTGGGTCAACGCCAAGGGTGAGTAGTGGCCACCT CCATCTCCTCCATTTCCCCCCCCCATCATCACCACTCCGTCGCTGCAGAAGGAGGGGTTCATGTTCCGGCGGGGG ACTTGTAACCAACATATGTCCCCATGACATCCATGACACCCCCAGTGGCTGACCACGTTGTACTACCATTTAGGA GCCTGGACCATCCACTTCGTTCTCATCATCGCCCTCAAGATCTTGTTCGACATCATTCCCGGTGTCTCGCAGGAG ACTTCATGGACACTCACCAACATCAGCTACATGTTCGGTTCTTTCCTCATGTTCCACTGGGTGCGGGGCATCCCT TTTGAATTCAACGCCGGCGCGTACGACAACCTCAACATGTGGGAGCAGATCGACAATGGAGATCAGTATACGCCC ACAAAGAAGTTCCTCCTCTGCGTGCCCATTTGTCTCTTCCTGCTTAGCACACATTATACCCACTACGACTTGACG TATTTCACCATCAATTTCCTTGCAACCCTGGGAGTTGTCATCCCGAAATTGCCGTTTGTATGTATTATCCTTGCC TTCTGTGGTGGGGTGAGTCATGATTGCTAACTGCTGTGTTAGTCGCACCGTCTGCGAATAGGTCTCTTCTCTGAT ATACCCGAAGAGTAG |