Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g328.t1
Gene name
Locationscaffold_001:950163..950928
Strand-
Gene length (bp)765
Transcript length (bp)540
Coding sequence length (bp)540
Protein length (aa) 180

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04061 ORMDL ORMDL family 1.9E-59 35 169

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0005789 endoplasmic reticulum membrane Yes
GO:0110165 cellular anatomical entity No
GO:0016020 membrane No
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No
GO:0031090 organelle membrane No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 70 0.5

Transmembrane Domains

Domain # Start End Length
1 47 66 19
2 81 103 22
3 124 142 18

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g328.t1
MAQGKAGRRRRSSSIIYQEPPESIEHTSDQAALPNLNANWVNAKGAWTIHFVLIIALKILFDIIPGVSQETSWTL
TNISYMFGSFLMFHWVRGIPFEFNAGAYDNLNMWEQIDNGDQYTPTKKFLLCVPICLFLLSTHYTHYDLTYFTIN
FLATLGVVIPKLPFSHRLRIGLFSDIPEE*
Coding >Ani_SJS72_1|g328.t1
ATGGCCCAGGGCAAGGCTGGACGGAGGAGACGGTCGAGTAGTATCATCTACCAAGAGCCCCCCGAATCCATTGAG
CACACCAGCGACCAGGCTGCTCTGCCCAATTTGAATGCGAACTGGGTCAACGCCAAGGGAGCCTGGACCATCCAC
TTCGTTCTCATCATCGCCCTCAAGATCTTGTTCGACATCATTCCCGGTGTCTCGCAGGAGACTTCATGGACACTC
ACCAACATCAGCTACATGTTCGGTTCTTTCCTCATGTTCCACTGGGTGCGGGGCATCCCTTTTGAATTCAACGCC
GGCGCGTACGACAACCTCAACATGTGGGAGCAGATCGACAATGGAGATCAGTATACGCCCACAAAGAAGTTCCTC
CTCTGCGTGCCCATTTGTCTCTTCCTGCTTAGCACACATTATACCCACTACGACTTGACGTATTTCACCATCAAT
TTCCTTGCAACCCTGGGAGTTGTCATCCCGAAATTGCCGTTTTCGCACCGTCTGCGAATAGGTCTCTTCTCTGAT
ATACCCGAAGAGTAG
Transcript >Ani_SJS72_1|g328.t1
ATGGCCCAGGGCAAGGCTGGACGGAGGAGACGGTCGAGTAGTATCATCTACCAAGAGCCCCCCGAATCCATTGAG
CACACCAGCGACCAGGCTGCTCTGCCCAATTTGAATGCGAACTGGGTCAACGCCAAGGGAGCCTGGACCATCCAC
TTCGTTCTCATCATCGCCCTCAAGATCTTGTTCGACATCATTCCCGGTGTCTCGCAGGAGACTTCATGGACACTC
ACCAACATCAGCTACATGTTCGGTTCTTTCCTCATGTTCCACTGGGTGCGGGGCATCCCTTTTGAATTCAACGCC
GGCGCGTACGACAACCTCAACATGTGGGAGCAGATCGACAATGGAGATCAGTATACGCCCACAAAGAAGTTCCTC
CTCTGCGTGCCCATTTGTCTCTTCCTGCTTAGCACACATTATACCCACTACGACTTGACGTATTTCACCATCAAT
TTCCTTGCAACCCTGGGAGTTGTCATCCCGAAATTGCCGTTTTCGCACCGTCTGCGAATAGGTCTCTTCTCTGAT
ATACCCGAAGAGTAG
Gene >Ani_SJS72_1|g328.t1
ATGGCCCAGGGCAAGGCTGGACGGAGGAGACGGTCGAGTAGTATCATCTACCAAGAGCCCCCCGAATCCATTGAG
CACACCAGCGACCAGGCTGCTCTGCCCAATTTGAATGCGAACTGGGTCAACGCCAAGGGTGAGTAGTGGCCACCT
CCATCTCCTCCATTTCCCCCCCCCATCATCACCACTCCGTCGCTGCAGAAGGAGGGGTTCATGTTCCGGCGGGGG
ACTTGTAACCAACATATGTCCCCATGACATCCATGACACCCCCAGTGGCTGACCACGTTGTACTACCATTTAGGA
GCCTGGACCATCCACTTCGTTCTCATCATCGCCCTCAAGATCTTGTTCGACATCATTCCCGGTGTCTCGCAGGAG
ACTTCATGGACACTCACCAACATCAGCTACATGTTCGGTTCTTTCCTCATGTTCCACTGGGTGCGGGGCATCCCT
TTTGAATTCAACGCCGGCGCGTACGACAACCTCAACATGTGGGAGCAGATCGACAATGGAGATCAGTATACGCCC
ACAAAGAAGTTCCTCCTCTGCGTGCCCATTTGTCTCTTCCTGCTTAGCACACATTATACCCACTACGACTTGACG
TATTTCACCATCAATTTCCTTGCAACCCTGGGAGTTGTCATCCCGAAATTGCCGTTTGTATGTATTATCCTTGCC
TTCTGTGGTGGGGTGAGTCATGATTGCTAACTGCTGTGTTAGTCGCACCGTCTGCGAATAGGTCTCTTCTCTGAT
ATACCCGAAGAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail