© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g3236.t1 |
| Gene name | |
| Location | scaffold_017:399812..401417 |
| Strand | - |
| Gene length (bp) | 1605 |
| Transcript length (bp) | 1545 |
| Coding sequence length (bp) | 1545 |
| Protein length (aa) | 515 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02133 | Transp_cyt_pur | Permease for cytosine/purines, uracil, thiamine, allantoin | 1.0E-16 | 62 | 469 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 44 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 78 | 100 | 22 |
| 2 | 110 | 132 | 22 |
| 3 | 153 | 175 | 22 |
| 4 | 185 | 207 | 22 |
| 5 | 214 | 233 | 19 |
| 6 | 253 | 275 | 22 |
| 7 | 287 | 309 | 22 |
| 8 | 345 | 367 | 22 |
| 9 | 380 | 398 | 18 |
| 10 | 408 | 430 | 22 |
| 11 | 451 | 473 | 22 |
| 12 | 488 | 507 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g3236.t1 MADTMRDEEKGHRAAPAVESVSSPSESGKEMASFPSSGNAWTRLNARIQSIKFLESRGIERVPESERYATSASNY MQMALLWFSTNITANNIAVGMYGPLDYSLSFVDSALCAVFGAFLGAAGVAYMGTFGPQSGNRTMVVARYFMGYYP SKIACLLNIIIMLGYGMIDCLVGGQVLSAVADGGLTVVVGIIIIAIITWIVVVFGMAPFHVYERWAWVPQLIAIF VLVGSAGPKFDTNISSTGDTQTINANRLTFFSLCLSSSVAWAPAGADFFVYFPPTTSKWKTFTLTLFGVGLALSF ANLMGIGLASGTLTNPSWAEAYDTSAGALIIAGYDGLGGFGKFLGVLVALGLIANNIPGTYSATLGFQIMGRHLG SLPRWFLSCVCVIIYTACALGGRNHLYDIFENFLALMGYWVTIYLTIALEEHLIFRRTRGFDWDAWADRSKLPLG LAALAAFLIGWAGAIVCMDQIWYVGPIARMVGSDGADLGIWVGVSWAMLVFPPLRYLELQKIGR* |
| Coding | >Ani_SJS72_1|g3236.t1 ATGGCTGATACCATGCGTGACGAGGAGAAGGGCCACCGCGCCGCTCCAGCCGTAGAGTCGGTCTCGTCTCCCTCG GAAAGTGGAAAAGAAATGGCCTCCTTCCCTTCTTCAGGGAATGCCTGGACGAGGCTCAACGCTCGAATTCAATCC ATCAAATTCCTCGAAAGCCGCGGTATCGAGCGTGTTCCGGAGTCCGAGCGCTACGCTACCTCCGCGTCCAATTAC ATGCAAATGGCTCTGCTTTGGTTCAGTACGAACATCACCGCTAACAACATTGCGGTTGGAATGTATGGGCCACTG GACTACTCTCTGAGTTTCGTTGACTCGGCACTCTGTGCGGTGTTCGGTGCTTTCCTTGGTGCGGCAGGTGTGGCG TATATGGGAACCTTCGGACCGCAGAGCGGTAATCGAACAATGGTTGTCGCGAGATATTTCATGGGCTACTACCCG AGTAAGATTGCTTGTCTTCTGAACATTATCATCATGTTGGGTTATGGAATGATCGACTGCCTCGTGGGTGGCCAG GTGCTGTCCGCGGTTGCTGATGGTGGGTTAACGGTGGTGGTGGGAATCATCATCATTGCCATCATCACGTGGATC GTCGTGGTCTTTGGTATGGCGCCTTTCCACGTGTACGAGCGATGGGCCTGGGTGCCTCAACTCATCGCCATTTTC GTCTTGGTCGGCAGTGCCGGCCCGAAATTCGACACCAACATCTCCTCCACTGGCGACACCCAGACCATCAACGCC AACCGTCTCACCTTCTTCTCGCTCTGCCTTTCCAGTTCAGTTGCCTGGGCCCCTGCTGGTGCTGATTTCTTCGTC TACTTCCCACCCACCACCTCGAAGTGGAAGACTTTCACTCTCACCCTCTTCGGTGTCGGCCTTGCCCTCTCTTTT GCCAACCTTATGGGCATCGGCCTCGCTAGTGGCACGCTAACGAACCCATCCTGGGCGGAGGCCTACGACACCTCT GCTGGAGCTCTCATTATCGCCGGATATGACGGTCTCGGAGGATTTGGCAAGTTCTTGGGCGTCCTCGTCGCCCTG GGTCTGATTGCCAACAACATCCCTGGAACTTACTCTGCCACCCTGGGCTTCCAGATCATGGGCCGCCACCTCGGC AGCCTTCCCAGATGGTTCCTCTCCTGTGTTTGTGTGATCATCTACACTGCCTGCGCCCTAGGTGGCCGGAACCAC CTCTACGATATCTTCGAAAACTTCTTGGCCTTGATGGGTTATTGGGTAACCATCTATCTTACCATCGCCCTCGAA GAACACCTCATCTTCCGCCGCACCCGCGGCTTTGATTGGGATGCCTGGGCTGACCGGTCCAAGTTGCCCCTCGGC CTTGCTGCTCTGGCTGCGTTCTTGATCGGATGGGCGGGTGCGATCGTCTGCATGGACCAAATATGGTATGTTGGC CCGATTGCCAGGATGGTTGGCTCGGACGGCGCGGACCTGGGTATCTGGGTCGGTGTTTCCTGGGCGATGCTTGTG TTCCCGCCTCTGCGGTATTTGGAGCTGCAGAAGATTGGTCGGTAA |
| Transcript | >Ani_SJS72_1|g3236.t1 ATGGCTGATACCATGCGTGACGAGGAGAAGGGCCACCGCGCCGCTCCAGCCGTAGAGTCGGTCTCGTCTCCCTCG GAAAGTGGAAAAGAAATGGCCTCCTTCCCTTCTTCAGGGAATGCCTGGACGAGGCTCAACGCTCGAATTCAATCC ATCAAATTCCTCGAAAGCCGCGGTATCGAGCGTGTTCCGGAGTCCGAGCGCTACGCTACCTCCGCGTCCAATTAC ATGCAAATGGCTCTGCTTTGGTTCAGTACGAACATCACCGCTAACAACATTGCGGTTGGAATGTATGGGCCACTG GACTACTCTCTGAGTTTCGTTGACTCGGCACTCTGTGCGGTGTTCGGTGCTTTCCTTGGTGCGGCAGGTGTGGCG TATATGGGAACCTTCGGACCGCAGAGCGGTAATCGAACAATGGTTGTCGCGAGATATTTCATGGGCTACTACCCG AGTAAGATTGCTTGTCTTCTGAACATTATCATCATGTTGGGTTATGGAATGATCGACTGCCTCGTGGGTGGCCAG GTGCTGTCCGCGGTTGCTGATGGTGGGTTAACGGTGGTGGTGGGAATCATCATCATTGCCATCATCACGTGGATC GTCGTGGTCTTTGGTATGGCGCCTTTCCACGTGTACGAGCGATGGGCCTGGGTGCCTCAACTCATCGCCATTTTC GTCTTGGTCGGCAGTGCCGGCCCGAAATTCGACACCAACATCTCCTCCACTGGCGACACCCAGACCATCAACGCC AACCGTCTCACCTTCTTCTCGCTCTGCCTTTCCAGTTCAGTTGCCTGGGCCCCTGCTGGTGCTGATTTCTTCGTC TACTTCCCACCCACCACCTCGAAGTGGAAGACTTTCACTCTCACCCTCTTCGGTGTCGGCCTTGCCCTCTCTTTT GCCAACCTTATGGGCATCGGCCTCGCTAGTGGCACGCTAACGAACCCATCCTGGGCGGAGGCCTACGACACCTCT GCTGGAGCTCTCATTATCGCCGGATATGACGGTCTCGGAGGATTTGGCAAGTTCTTGGGCGTCCTCGTCGCCCTG GGTCTGATTGCCAACAACATCCCTGGAACTTACTCTGCCACCCTGGGCTTCCAGATCATGGGCCGCCACCTCGGC AGCCTTCCCAGATGGTTCCTCTCCTGTGTTTGTGTGATCATCTACACTGCCTGCGCCCTAGGTGGCCGGAACCAC CTCTACGATATCTTCGAAAACTTCTTGGCCTTGATGGGTTATTGGGTAACCATCTATCTTACCATCGCCCTCGAA GAACACCTCATCTTCCGCCGCACCCGCGGCTTTGATTGGGATGCCTGGGCTGACCGGTCCAAGTTGCCCCTCGGC CTTGCTGCTCTGGCTGCGTTCTTGATCGGATGGGCGGGTGCGATCGTCTGCATGGACCAAATATGGTATGTTGGC CCGATTGCCAGGATGGTTGGCTCGGACGGCGCGGACCTGGGTATCTGGGTCGGTGTTTCCTGGGCGATGCTTGTG TTCCCGCCTCTGCGGTATTTGGAGCTGCAGAAGATTGGTCGGTAA |
| Gene | >Ani_SJS72_1|g3236.t1 ATGGCTGATACCATGCGTGACGAGGAGAAGGGCCACCGCGCCGCTCCAGCCGTAGAGTCGGTCTCGTCTCCCTCG GAAAGTGGAAAAGAAATGGCCTCCTTCCCTTCTTCAGGGAATGCCTGGACGAGGCTCAACGCTCGAATTCAATCC ATCAAATTCCTCGAAAGCCGCGGTATCGAGCGTGTTCCGGAGTCCGAGCGCTACGCTACCTCCGCGTCCAATTAC ATGCAAATGGCTCTGCTTTGGTTCAGTACGAACATCACCGCTAACAACATTGCGGTTGGAATGTATGGGCCACTG GACTACTCTCTGAGTTTCGTTGACTCGGCACTCTGTGCGGTGTTCGGTGCTTTCCTTGGTGCGGCAGGTGTGGCG TATATGGGAACCTTCGGACCGCAGAGCGGTAATCGAACAATGGTAAGCAACGTCAAGGCCATCTGCTGGAGAAAT TATAGTACTAACAACAGAAACTTATAGGTTGTCGCGAGATATTTCATGGGCTACTACCCGAGTAAGATTGCTTGT CTTCTGAACATTATCATCATGTTGGGTTATGGAATGATCGACTGCCTCGTGGGTGGCCAGGTGCTGTCCGCGGTT GCTGATGGTGGGTTAACGGTGGTGGTGGGAATCATCATCATTGCCATCATCACGTGGATCGTCGTGGTCTTTGGT ATGGCGCCTTTCCACGTGTACGAGCGATGGGCCTGGGTGCCTCAACTCATCGCCATTTTCGTCTTGGTCGGCAGT GCCGGCCCGAAATTCGACACCAACATCTCCTCCACTGGCGACACCCAGACCATCAACGCCAACCGTCTCACCTTC TTCTCGCTCTGCCTTTCCAGTTCAGTTGCCTGGGCCCCTGCTGGTGCTGATTTCTTCGTCTACTTCCCACCCACC ACCTCGAAGTGGAAGACTTTCACTCTCACCCTCTTCGGTGTCGGCCTTGCCCTCTCTTTTGCCAACCTTATGGGC ATCGGCCTCGCTAGTGGCACGCTAACGAACCCATCCTGGGCGGAGGCCTACGACACCTCTGCTGGAGCTCTCATT ATCGCCGGATATGACGGTCTCGGAGGATTTGGCAAGTTCTTGGGCGTCCTCGTCGCCCTGGGTCTGATTGCCAAC AACATCCCTGGAACTTACTCTGCCACCCTGGGCTTCCAGATCATGGGCCGCCACCTCGGCAGCCTTCCCAGATGG TTCCTCTCCTGTGTTTGTGTGATCATCTACACTGCCTGCGCCCTAGGTGGCCGGAACCACCTCTACGATATCTTC GAAAACTTCTTGGCCTTGATGGGTTATTGGGTAACCATCTATCTTACCATCGCCCTCGAAGAACACCTCATCTTC CGCCGCACCCGCGGCTTTGATTGGGATGCCTGGGCTGACCGGTCCAAGTTGCCCCTCGGCCTTGCTGCTCTGGCT GCGTTCTTGATCGGATGGGCGGGTGCGATCGTCTGCATGGACCAAATATGGTATGTTGGCCCGATTGCCAGGATG GTTGGCTCGGACGGCGCGGACCTGGGTATCTGGGTCGGTGTTTCCTGGGCGATGCTTGTGTTCCCGCCTCTGCGG TATTTGGAGCTGCAGAAGATTGGTCGGTAA |