© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g3202.t1 |
| Gene name | |
| Location | scaffold_017:309659..310625 |
| Strand | - |
| Gene length (bp) | 966 |
| Transcript length (bp) | 912 |
| Coding sequence length (bp) | 912 |
| Protein length (aa) | 304 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06912 | DUF1275 | Protein of unknown function (DUF1275) | 5.7E-46 | 75 | 286 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 14 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 73 | 95 | 22 |
| 2 | 118 | 140 | 22 |
| 3 | 153 | 172 | 19 |
| 4 | 187 | 209 | 22 |
| 5 | 248 | 270 | 22 |
| 6 | 274 | 291 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g3202.t1 MQSYPSEDIQPVPAVRTTNRGHLQFAEDKGGLWSSGNSTNVSLSVNQPMKGGGLYANMARHFQAEIDTRYADIVL IVCGFVSGLVDGLSFNAWGSFSSMQTGNTLFIALGASSQPRYPAYLWAKSLIALCTFITSNVIFIQVARRLSPRR RSTLILSFATQTICLLAAAILVEAKVVSPKPEDPRAPIQWMQILPITLLAFQAGGQICASRILAYDEIPTVVLTT LLCDLLVDPDLLAKKNAKRNRRIGAFLALFLGAMTAGGLSKVATMASSLWFAFGLKFTITLSWIVWRAEGGSKAG DIV* |
| Coding | >Ani_SJS72_1|g3202.t1 ATGCAGTCCTATCCGTCCGAGGATATTCAACCGGTCCCAGCAGTAAGAACAACAAACAGAGGACATCTCCAATTT GCCGAAGACAAGGGTGGACTCTGGTCCTCTGGCAATAGCACCAATGTCTCCCTCTCTGTCAATCAGCCCATGAAA GGTGGAGGCCTTTATGCAAATATGGCTCGACACTTCCAAGCCGAGATCGACACCAGATATGCAGACATAGTCTTG ATAGTTTGCGGGTTTGTCAGCGGGCTAGTTGACGGGCTATCCTTTAACGCATGGGGTAGCTTCTCAAGCATGCAG ACAGGGAATACCCTCTTCATCGCCCTCGGTGCCTCCTCCCAACCTAGATATCCAGCTTACCTCTGGGCCAAATCA CTCATAGCCCTATGCACTTTTATAACCAGCAACGTCATCTTCATCCAGGTAGCCAGAAGACTGAGCCCTCGGCGT CGTTCAACCCTGATTCTTTCGTTCGCTACCCAAACCATCTGCCTCCTCGCCGCTGCCATCCTGGTTGAAGCCAAA GTGGTCTCCCCGAAGCCAGAAGATCCCCGGGCTCCGATCCAGTGGATGCAGATTCTGCCCATTACTCTACTTGCC TTCCAGGCAGGCGGGCAGATCTGCGCGTCAAGGATTCTCGCATATGATGAGATTCCTACTGTAGTACTCACAACC TTGTTGTGTGATCTACTGGTCGACCCGGATCTACTCGCAAAGAAGAACGCTAAGCGGAACAGACGGATTGGGGCA TTCCTGGCGTTGTTTCTGGGGGCGATGACAGCGGGTGGGTTGTCTAAAGTTGCTACCATGGCGAGTAGCCTGTGG TTCGCCTTTGGGTTGAAGTTCACAATCACCCTTAGTTGGATTGTCTGGAGAGCAGAAGGGGGGAGTAAAGCCGGA GACATCGTTTGA |
| Transcript | >Ani_SJS72_1|g3202.t1 ATGCAGTCCTATCCGTCCGAGGATATTCAACCGGTCCCAGCAGTAAGAACAACAAACAGAGGACATCTCCAATTT GCCGAAGACAAGGGTGGACTCTGGTCCTCTGGCAATAGCACCAATGTCTCCCTCTCTGTCAATCAGCCCATGAAA GGTGGAGGCCTTTATGCAAATATGGCTCGACACTTCCAAGCCGAGATCGACACCAGATATGCAGACATAGTCTTG ATAGTTTGCGGGTTTGTCAGCGGGCTAGTTGACGGGCTATCCTTTAACGCATGGGGTAGCTTCTCAAGCATGCAG ACAGGGAATACCCTCTTCATCGCCCTCGGTGCCTCCTCCCAACCTAGATATCCAGCTTACCTCTGGGCCAAATCA CTCATAGCCCTATGCACTTTTATAACCAGCAACGTCATCTTCATCCAGGTAGCCAGAAGACTGAGCCCTCGGCGT CGTTCAACCCTGATTCTTTCGTTCGCTACCCAAACCATCTGCCTCCTCGCCGCTGCCATCCTGGTTGAAGCCAAA GTGGTCTCCCCGAAGCCAGAAGATCCCCGGGCTCCGATCCAGTGGATGCAGATTCTGCCCATTACTCTACTTGCC TTCCAGGCAGGCGGGCAGATCTGCGCGTCAAGGATTCTCGCATATGATGAGATTCCTACTGTAGTACTCACAACC TTGTTGTGTGATCTACTGGTCGACCCGGATCTACTCGCAAAGAAGAACGCTAAGCGGAACAGACGGATTGGGGCA TTCCTGGCGTTGTTTCTGGGGGCGATGACAGCGGGTGGGTTGTCTAAAGTTGCTACCATGGCGAGTAGCCTGTGG TTCGCCTTTGGGTTGAAGTTCACAATCACCCTTAGTTGGATTGTCTGGAGAGCAGAAGGGGGGAGTAAAGCCGGA GACATCGTTTGA |
| Gene | >Ani_SJS72_1|g3202.t1 ATGCAGTCCTATCCGTCCGAGGATATTCAACCGGTCCCAGCAGTAAGAACAACAAACAGAGGACATCTCCAATTT GCCGAAGACAAGGGTGGACTCTGGTCCTCTGGCAATAGCACCAATGTCTCCCTCTCTGTCAATCAGCCCATGAAA GGTGGAGGCCTTTATGCAAATATGGCTCGACACTTCCAAGCCGAGATCGACACCAGATATGCAGACATAGTCTTG ATAGTTTGCGGGTTTGTCAGCGGGCTAGTTGACGGGCTATCCTTTAACGCATGGGGTAGCTTCTCAAGCATGCAG ACAGGTACGCCATAGCAGTTTGACTATAGTCGCCTATAACAGCTCCTAATGAACCTAGGGAATACCCTCTTCATC GCCCTCGGTGCCTCCTCCCAACCTAGATATCCAGCTTACCTCTGGGCCAAATCACTCATAGCCCTATGCACTTTT ATAACCAGCAACGTCATCTTCATCCAGGTAGCCAGAAGACTGAGCCCTCGGCGTCGTTCAACCCTGATTCTTTCG TTCGCTACCCAAACCATCTGCCTCCTCGCCGCTGCCATCCTGGTTGAAGCCAAAGTGGTCTCCCCGAAGCCAGAA GATCCCCGGGCTCCGATCCAGTGGATGCAGATTCTGCCCATTACTCTACTTGCCTTCCAGGCAGGCGGGCAGATC TGCGCGTCAAGGATTCTCGCATATGATGAGATTCCTACTGTAGTACTCACAACCTTGTTGTGTGATCTACTGGTC GACCCGGATCTACTCGCAAAGAAGAACGCTAAGCGGAACAGACGGATTGGGGCATTCCTGGCGTTGTTTCTGGGG GCGATGACAGCGGGTGGGTTGTCTAAAGTTGCTACCATGGCGAGTAGCCTGTGGTTCGCCTTTGGGTTGAAGTTC ACAATCACCCTTAGTTGGATTGTCTGGAGAGCAGAAGGGGGGAGTAAAGCCGGAGACATCGTTTGA |