Protein ID | Ani_SJS72_1|g3192.t1 |
Gene name | |
Location | scaffold_017:279830..281006 |
Strand | + |
Gene length (bp) | 1176 |
Transcript length (bp) | 1032 |
Coding sequence length (bp) | 1032 |
Protein length (aa) | 344 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05739 | SNARE | SNARE domain | 3.4E-12 | 287 | 339 |
PF11416 | Syntaxin-5_N | Syntaxin-5 N-terminal, Sly1p-binding domain | 1.8E-10 | 1 | 23 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 53 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 322 | 341 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g3192.t1 MTGPSIQDRTGEFHAILGQAQKRMAANKASSQRQALLTDAQRKQANGSADGQGGKRRSEFARRAVEIGRGITATT AKLQRLAELAKRKTLFDDRPVEISELTFVIKQDLASLNQQIASLQALTLSQHPKSNRSKADQEGEHNDNVVVMLQ GKLADVGANFKDVLEVRTKNIQASRSRTENFVSSVSSKTHSALDTQRSDSPLYNTSGRRTPQPGGASDLLTLEPS NPSPLGRPSMHSDQQLLVMEEAQTSNAYIQGRGEAIDAIERTISELGGIFGQLAQMVSEQSDMIQRIDANTEDVV DNVQGAHRELLKYWTRVSGNRWLIAKMFGVLMIFFLLWVLISG* |
Coding | >Ani_SJS72_1|g3192.t1 ATGACCGGCCCGTCCATCCAAGATCGTACCGGCGAGTTCCACGCCATTCTGGGTCAAGCCCAGAAGCGCATGGCC GCCAACAAAGCCAGTTCACAGCGCCAGGCTCTTTTGACAGATGCGCAGCGGAAACAAGCAAACGGTTCCGCAGAC GGGCAGGGTGGCAAACGACGATCGGAGTTTGCCCGGAGAGCTGTGGAAATTGGACGAGGCATCACGGCGACGACT GCGAAGCTGCAGAGACTGGCCGAGTTGGCCAAGCGAAAGACACTCTTTGACGACAGACCGGTTGAGATTTCCGAG TTGACGTTTGTGATCAAACAAGATCTCGCCTCGTTGAATCAGCAAATCGCCTCGTTGCAAGCGCTTACTCTTTCA CAACATCCTAAGAGCAATCGGTCGAAGGCGGACCAGGAAGGAGAGCATAATGACAATGTGGTTGTCATGCTACAA GGAAAATTGGCAGATGTGGGAGCCAACTTCAAAGACGTCCTTGAAGTGCGCACAAAGAACATCCAGGCCTCGCGA TCCAGAACCGAGAACTTTGTCTCCTCAGTATCCTCAAAGACACATTCTGCCCTCGATACGCAGCGCTCCGATTCC CCACTTTACAACACATCTGGACGGCGGACGCCCCAGCCGGGCGGCGCTTCCGATCTACTGACTCTGGAACCCTCG AACCCGTCTCCACTCGGCCGCCCCTCCATGCACTCAGATCAGCAACTACTGGTCATGGAGGAAGCCCAGACGAGC AACGCCTATATCCAAGGGCGTGGTGAGGCAATTGATGCGATTGAACGCACCATCAGCGAGCTGGGTGGTATCTTC GGCCAGCTTGCGCAGATGGTCAGCGAGCAGTCCGACATGATCCAGCGGATAGATGCCAACACGGAAGATGTGGTG GATAACGTGCAGGGAGCGCATCGCGAGTTACTGAAGTACTGGACGCGGGTATCCGGGAACCGATGGCTCATCGCC AAGATGTTTGGCGTTCTAATGATCTTCTTCCTACTCTGGGTGTTGATATCGGGATAG |
Transcript | >Ani_SJS72_1|g3192.t1 ATGACCGGCCCGTCCATCCAAGATCGTACCGGCGAGTTCCACGCCATTCTGGGTCAAGCCCAGAAGCGCATGGCC GCCAACAAAGCCAGTTCACAGCGCCAGGCTCTTTTGACAGATGCGCAGCGGAAACAAGCAAACGGTTCCGCAGAC GGGCAGGGTGGCAAACGACGATCGGAGTTTGCCCGGAGAGCTGTGGAAATTGGACGAGGCATCACGGCGACGACT GCGAAGCTGCAGAGACTGGCCGAGTTGGCCAAGCGAAAGACACTCTTTGACGACAGACCGGTTGAGATTTCCGAG TTGACGTTTGTGATCAAACAAGATCTCGCCTCGTTGAATCAGCAAATCGCCTCGTTGCAAGCGCTTACTCTTTCA CAACATCCTAAGAGCAATCGGTCGAAGGCGGACCAGGAAGGAGAGCATAATGACAATGTGGTTGTCATGCTACAA GGAAAATTGGCAGATGTGGGAGCCAACTTCAAAGACGTCCTTGAAGTGCGCACAAAGAACATCCAGGCCTCGCGA TCCAGAACCGAGAACTTTGTCTCCTCAGTATCCTCAAAGACACATTCTGCCCTCGATACGCAGCGCTCCGATTCC CCACTTTACAACACATCTGGACGGCGGACGCCCCAGCCGGGCGGCGCTTCCGATCTACTGACTCTGGAACCCTCG AACCCGTCTCCACTCGGCCGCCCCTCCATGCACTCAGATCAGCAACTACTGGTCATGGAGGAAGCCCAGACGAGC AACGCCTATATCCAAGGGCGTGGTGAGGCAATTGATGCGATTGAACGCACCATCAGCGAGCTGGGTGGTATCTTC GGCCAGCTTGCGCAGATGGTCAGCGAGCAGTCCGACATGATCCAGCGGATAGATGCCAACACGGAAGATGTGGTG GATAACGTGCAGGGAGCGCATCGCGAGTTACTGAAGTACTGGACGCGGGTATCCGGGAACCGATGGCTCATCGCC AAGATGTTTGGCGTTCTAATGATCTTCTTCCTACTCTGGGTGTTGATATCGGGATAG |
Gene | >Ani_SJS72_1|g3192.t1 ATGACCGGCCCGTCCATCCAAGATCGTACCGGCGAGTTCCACGCCATTCTGGGTCAAGCCCAGAAGCGCATGGCC GCCAACAAAGCCAGTTCACAGCGCCAGGCTCTTTTGACAGATGCGCAGCGGAAACAAGCAAACGGTTCCGCAGAC GGGCAGGGTGGCAAACGACGATCGGAGTTTGCCCGGAGAGCTGTGGAAATTGGACGAGGCATCACGGCGACGACT GCGAAGCTGCAGAGACTGGCCGAGTGTGAGTGACTTTTGGACGGTCAGATGAATGGCGCTAATATTATTCGCAGT GGCCAAGCGAAAGACACTCTTTGACGACAGACCGGTTGAGATTTCCGAGTTGACGTTTGTGATCAAACAAGATCT CGCCTCGTTGAATCAGCAAATCGCCTCGTTGCAAGCGCTTACTCTTTCACAACATCCTAAGAGCAATCGGTCGAA GGCGGACCAGGAAGGAGAGCATAATGACAATGTACGTGCGACCAATATAAAGACCGGAATGAAGCTAATGGGTTT AGGTGGTTGTCATGCTACAAGGAAAATTGGCAGATGTGGGAGCCAACTTCAAAGACGTCCTTGAAGTGCGCACAA AGAACATCCAGGCCTCGCGATCCAGAACCGAGAACTTTGTCTCCTCAGTATCCTCAAAGACACATTCTGCCCTCG ATACGCAGCGCTCCGATTCCCCACTTTACAACACATCTGGACGGCGGACGCCCCAGCCGGGCGGCGCTTCCGATC TACTGACTCTGGAACCCTCGAACCCGTCTCCACTCGGCCGCCCCTCCATGCACTCAGATCAGCAACTACTGGTCA TGGAGGAAGCCCAGACGAGCAACGCCTATATCCAAGGGCGTGGTGAGGCAATTGATGCGATTGAACGCACCATCA GCGAGCTGGGTGGTATCTTCGGCCAGCTTGCGCAGATGGTCAGCGAGCAGTCCGACATGATCCAGCGGATAGATG CCAACACGGAAGATGTGGTGGATAACGTGCAGGGAGCGCATCGCGAGTTACTGAAGTACTGGACGCGGGTATCCG GGAACCGATGGCTCATCGCCAAGATGTTTGGCGTTCTAATGGTAAGCTCATCCCGTAACTTGGTGGTCGAATGGC AGCTAACTTGTGCAGATCTTCTTCCTACTCTGGGTGTTGATATCGGGATAG |