Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g3192.t1
Gene name
Locationscaffold_017:279830..281006
Strand+
Gene length (bp)1176
Transcript length (bp)1032
Coding sequence length (bp)1032
Protein length (aa) 344

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05739 SNARE SNARE domain 3.4E-12 287 339
PF11416 Syntaxin-5_N Syntaxin-5 N-terminal, Sly1p-binding domain 1.8E-10 1 23

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 53 0.45

Transmembrane Domains

Domain # Start End Length
1 322 341 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g3192.t1
MTGPSIQDRTGEFHAILGQAQKRMAANKASSQRQALLTDAQRKQANGSADGQGGKRRSEFARRAVEIGRGITATT
AKLQRLAELAKRKTLFDDRPVEISELTFVIKQDLASLNQQIASLQALTLSQHPKSNRSKADQEGEHNDNVVVMLQ
GKLADVGANFKDVLEVRTKNIQASRSRTENFVSSVSSKTHSALDTQRSDSPLYNTSGRRTPQPGGASDLLTLEPS
NPSPLGRPSMHSDQQLLVMEEAQTSNAYIQGRGEAIDAIERTISELGGIFGQLAQMVSEQSDMIQRIDANTEDVV
DNVQGAHRELLKYWTRVSGNRWLIAKMFGVLMIFFLLWVLISG*
Coding >Ani_SJS72_1|g3192.t1
ATGACCGGCCCGTCCATCCAAGATCGTACCGGCGAGTTCCACGCCATTCTGGGTCAAGCCCAGAAGCGCATGGCC
GCCAACAAAGCCAGTTCACAGCGCCAGGCTCTTTTGACAGATGCGCAGCGGAAACAAGCAAACGGTTCCGCAGAC
GGGCAGGGTGGCAAACGACGATCGGAGTTTGCCCGGAGAGCTGTGGAAATTGGACGAGGCATCACGGCGACGACT
GCGAAGCTGCAGAGACTGGCCGAGTTGGCCAAGCGAAAGACACTCTTTGACGACAGACCGGTTGAGATTTCCGAG
TTGACGTTTGTGATCAAACAAGATCTCGCCTCGTTGAATCAGCAAATCGCCTCGTTGCAAGCGCTTACTCTTTCA
CAACATCCTAAGAGCAATCGGTCGAAGGCGGACCAGGAAGGAGAGCATAATGACAATGTGGTTGTCATGCTACAA
GGAAAATTGGCAGATGTGGGAGCCAACTTCAAAGACGTCCTTGAAGTGCGCACAAAGAACATCCAGGCCTCGCGA
TCCAGAACCGAGAACTTTGTCTCCTCAGTATCCTCAAAGACACATTCTGCCCTCGATACGCAGCGCTCCGATTCC
CCACTTTACAACACATCTGGACGGCGGACGCCCCAGCCGGGCGGCGCTTCCGATCTACTGACTCTGGAACCCTCG
AACCCGTCTCCACTCGGCCGCCCCTCCATGCACTCAGATCAGCAACTACTGGTCATGGAGGAAGCCCAGACGAGC
AACGCCTATATCCAAGGGCGTGGTGAGGCAATTGATGCGATTGAACGCACCATCAGCGAGCTGGGTGGTATCTTC
GGCCAGCTTGCGCAGATGGTCAGCGAGCAGTCCGACATGATCCAGCGGATAGATGCCAACACGGAAGATGTGGTG
GATAACGTGCAGGGAGCGCATCGCGAGTTACTGAAGTACTGGACGCGGGTATCCGGGAACCGATGGCTCATCGCC
AAGATGTTTGGCGTTCTAATGATCTTCTTCCTACTCTGGGTGTTGATATCGGGATAG
Transcript >Ani_SJS72_1|g3192.t1
ATGACCGGCCCGTCCATCCAAGATCGTACCGGCGAGTTCCACGCCATTCTGGGTCAAGCCCAGAAGCGCATGGCC
GCCAACAAAGCCAGTTCACAGCGCCAGGCTCTTTTGACAGATGCGCAGCGGAAACAAGCAAACGGTTCCGCAGAC
GGGCAGGGTGGCAAACGACGATCGGAGTTTGCCCGGAGAGCTGTGGAAATTGGACGAGGCATCACGGCGACGACT
GCGAAGCTGCAGAGACTGGCCGAGTTGGCCAAGCGAAAGACACTCTTTGACGACAGACCGGTTGAGATTTCCGAG
TTGACGTTTGTGATCAAACAAGATCTCGCCTCGTTGAATCAGCAAATCGCCTCGTTGCAAGCGCTTACTCTTTCA
CAACATCCTAAGAGCAATCGGTCGAAGGCGGACCAGGAAGGAGAGCATAATGACAATGTGGTTGTCATGCTACAA
GGAAAATTGGCAGATGTGGGAGCCAACTTCAAAGACGTCCTTGAAGTGCGCACAAAGAACATCCAGGCCTCGCGA
TCCAGAACCGAGAACTTTGTCTCCTCAGTATCCTCAAAGACACATTCTGCCCTCGATACGCAGCGCTCCGATTCC
CCACTTTACAACACATCTGGACGGCGGACGCCCCAGCCGGGCGGCGCTTCCGATCTACTGACTCTGGAACCCTCG
AACCCGTCTCCACTCGGCCGCCCCTCCATGCACTCAGATCAGCAACTACTGGTCATGGAGGAAGCCCAGACGAGC
AACGCCTATATCCAAGGGCGTGGTGAGGCAATTGATGCGATTGAACGCACCATCAGCGAGCTGGGTGGTATCTTC
GGCCAGCTTGCGCAGATGGTCAGCGAGCAGTCCGACATGATCCAGCGGATAGATGCCAACACGGAAGATGTGGTG
GATAACGTGCAGGGAGCGCATCGCGAGTTACTGAAGTACTGGACGCGGGTATCCGGGAACCGATGGCTCATCGCC
AAGATGTTTGGCGTTCTAATGATCTTCTTCCTACTCTGGGTGTTGATATCGGGATAG
Gene >Ani_SJS72_1|g3192.t1
ATGACCGGCCCGTCCATCCAAGATCGTACCGGCGAGTTCCACGCCATTCTGGGTCAAGCCCAGAAGCGCATGGCC
GCCAACAAAGCCAGTTCACAGCGCCAGGCTCTTTTGACAGATGCGCAGCGGAAACAAGCAAACGGTTCCGCAGAC
GGGCAGGGTGGCAAACGACGATCGGAGTTTGCCCGGAGAGCTGTGGAAATTGGACGAGGCATCACGGCGACGACT
GCGAAGCTGCAGAGACTGGCCGAGTGTGAGTGACTTTTGGACGGTCAGATGAATGGCGCTAATATTATTCGCAGT
GGCCAAGCGAAAGACACTCTTTGACGACAGACCGGTTGAGATTTCCGAGTTGACGTTTGTGATCAAACAAGATCT
CGCCTCGTTGAATCAGCAAATCGCCTCGTTGCAAGCGCTTACTCTTTCACAACATCCTAAGAGCAATCGGTCGAA
GGCGGACCAGGAAGGAGAGCATAATGACAATGTACGTGCGACCAATATAAAGACCGGAATGAAGCTAATGGGTTT
AGGTGGTTGTCATGCTACAAGGAAAATTGGCAGATGTGGGAGCCAACTTCAAAGACGTCCTTGAAGTGCGCACAA
AGAACATCCAGGCCTCGCGATCCAGAACCGAGAACTTTGTCTCCTCAGTATCCTCAAAGACACATTCTGCCCTCG
ATACGCAGCGCTCCGATTCCCCACTTTACAACACATCTGGACGGCGGACGCCCCAGCCGGGCGGCGCTTCCGATC
TACTGACTCTGGAACCCTCGAACCCGTCTCCACTCGGCCGCCCCTCCATGCACTCAGATCAGCAACTACTGGTCA
TGGAGGAAGCCCAGACGAGCAACGCCTATATCCAAGGGCGTGGTGAGGCAATTGATGCGATTGAACGCACCATCA
GCGAGCTGGGTGGTATCTTCGGCCAGCTTGCGCAGATGGTCAGCGAGCAGTCCGACATGATCCAGCGGATAGATG
CCAACACGGAAGATGTGGTGGATAACGTGCAGGGAGCGCATCGCGAGTTACTGAAGTACTGGACGCGGGTATCCG
GGAACCGATGGCTCATCGCCAAGATGTTTGGCGTTCTAATGGTAAGCTCATCCCGTAACTTGGTGGTCGAATGGC
AGCTAACTTGTGCAGATCTTCTTCCTACTCTGGGTGTTGATATCGGGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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