Protein ID | Ani_SJS72_1|g3187.t1 |
Gene name | |
Location | scaffold_017:263418..265468 |
Strand | + |
Gene length (bp) | 2050 |
Transcript length (bp) | 1998 |
Coding sequence length (bp) | 1998 |
Protein length (aa) | 666 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03109 | ABC1 | ABC1 atypical kinase-like domain | 2.3E-58 | 175 | 485 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 75 | 97 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g3187.t1 MASATVPRAWRSLPSQFARPRVHLSPRAPRQPLLQLRQYVQAGHYQPFVPPSPASLGKPTKAKTYDRTRKWLRRL VYLSLATGTVYVLDTQFYASSLTRTARTFSLGLLVALDYKINFRPNPPLARDINAVHTRNAERLSDLLRHNGGLY LKIGQAIAMQSAILPPEFQKMFSRMFDDAPQNDWKDVDKVIREDFGRSAEEVFGVSFTGEPGKGVMERTARASAS VAQVHWARLPDGREVAIKIQKREIAQQLKWDLWAFKVVAWIYSRTFDIPFYSLVPYVSERLSLETDFENEADNSE NMARLVAGEPRLRGRVYIPKVHRELSSKRVMTAEWIEGVRLWDKDSITRTWRGGWRSGTPGCHGTPLDARNAEDP VAKVARNPSLTTKIKPERDHWRGGYARAGLGLSLKEVMTTMVDLFSAQMFLWGIVHCDPHPGNIFIRRTPSGHPE LVLIDHGLYIHMDTEFRHQYARFWKALLTFDNTTLNSIVRGWGVQNADLFASATLMRPYRGGDLSTHRSFEGLSK SERATRHYEMQQAARKAIRDILGDESKWPRPLIFIGRNLRIVQANNQFLGSPVNRIKITGTWASRALVESPDLSA SERLRNFGRHLLFRVVLFSTDLFFWFTKVRQFLRLGGGMEDSIEAQMQGMAKDMGVELSQNVFEG* |
Coding | >Ani_SJS72_1|g3187.t1 ATGGCATCGGCCACCGTTCCCCGCGCCTGGCGCTCCCTCCCCTCCCAGTTTGCCCGCCCGCGCGTCCATCTTTCC CCTCGTGCTCCCCGTCAGCCTCTCTTGCAACTCCGTCAATATGTCCAAGCAGGCCATTACCAGCCTTTCGTTCCC CCATCGCCAGCCTCCCTAGGCAAACCCACCAAGGCCAAGACCTACGATCGCACCCGTAAATGGCTTCGTCGGCTG GTCTACCTTTCGCTAGCCACTGGGACCGTCTACGTCCTCGACACTCAATTCTACGCCTCGTCTCTCACACGCACA GCTCGAACCTTCAGCTTGGGCCTCCTGGTAGCCCTGGATTACAAGATAAACTTCCGTCCCAACCCGCCGCTGGCC AGAGACATCAATGCCGTACACACCCGCAATGCTGAGCGTCTGTCCGACCTCCTGCGTCACAATGGCGGTCTGTAC CTGAAAATCGGCCAAGCCATCGCTATGCAGTCCGCCATCCTGCCCCCGGAATTTCAGAAAATGTTCTCGCGCATG TTCGATGACGCCCCTCAGAACGACTGGAAAGATGTCGACAAGGTCATCCGCGAGGACTTTGGCCGCTCGGCTGAG GAGGTTTTTGGCGTCTCCTTCACGGGTGAGCCCGGAAAGGGTGTTATGGAGCGGACTGCGCGCGCGAGTGCCAGT GTAGCACAGGTACATTGGGCGCGTCTTCCGGATGGTCGTGAGGTGGCAATCAAGATCCAGAAACGTGAAATTGCT CAACAGCTGAAATGGGATCTGTGGGCTTTCAAAGTCGTTGCCTGGATCTATAGCCGCACCTTTGATATTCCGTTC TACAGCCTGGTTCCTTATGTGTCGGAGCGTCTCTCCCTTGAGACGGACTTTGAAAATGAGGCCGACAACTCCGAG AACATGGCGCGTTTGGTCGCCGGAGAGCCCCGTCTCCGCGGCCGGGTCTACATTCCCAAGGTCCACCGCGAGCTC AGCTCTAAGCGCGTCATGACCGCCGAGTGGATCGAGGGTGTTCGCCTCTGGGATAAGGACTCCATCACGCGGACC TGGCGTGGTGGCTGGCGTAGCGGCACCCCAGGCTGCCATGGCACGCCTCTCGACGCGCGCAATGCCGAGGATCCT GTCGCCAAAGTGGCCCGCAACCCGAGCCTAACCACCAAGATTAAGCCCGAGCGCGATCACTGGCGCGGCGGGTAC GCTCGCGCTGGTCTAGGCCTATCACTTAAGGAAGTCATGACTACTATGGTGGACCTCTTCTCCGCACAGATGTTC CTCTGGGGTATAGTCCACTGTGACCCGCACCCAGGCAACATCTTTATCCGCCGGACTCCTTCCGGTCACCCAGAG CTTGTCCTTATCGACCACGGACTGTACATTCACATGGACACCGAATTCCGACACCAGTACGCCCGCTTTTGGAAA GCTCTCCTCACCTTCGACAACACCACCCTTAACTCTATCGTCCGCGGCTGGGGCGTCCAGAATGCTGACCTCTTT GCCTCTGCCACCCTAATGCGCCCCTACCGCGGCGGCGATCTCTCGACGCATCGCTCCTTCGAAGGACTCAGCAAA TCCGAGCGTGCCACGCGCCACTACGAAATGCAGCAAGCCGCCCGCAAAGCCATTCGCGACATCCTCGGTGACGAA TCCAAATGGCCCCGCCCACTGATCTTCATTGGCCGCAACCTTCGCATCGTGCAGGCAAACAACCAGTTCCTGGGC TCGCCCGTCAACCGTATTAAGATCACAGGCACTTGGGCGTCCCGCGCGCTAGTTGAGTCTCCGGACTTGTCGGCG TCGGAGAGACTGAGAAACTTCGGTCGCCACCTGTTGTTCCGCGTGGTCCTGTTCAGCACAGACTTGTTCTTCTGG TTTACGAAGGTGCGGCAGTTCTTGAGACTTGGTGGAGGTATGGAGGATAGCATTGAGGCGCAGATGCAGGGGATG GCAAAGGATATGGGAGTGGAGTTGAGTCAGAATGTGTTCGAGGGATAA |
Transcript | >Ani_SJS72_1|g3187.t1 ATGGCATCGGCCACCGTTCCCCGCGCCTGGCGCTCCCTCCCCTCCCAGTTTGCCCGCCCGCGCGTCCATCTTTCC CCTCGTGCTCCCCGTCAGCCTCTCTTGCAACTCCGTCAATATGTCCAAGCAGGCCATTACCAGCCTTTCGTTCCC CCATCGCCAGCCTCCCTAGGCAAACCCACCAAGGCCAAGACCTACGATCGCACCCGTAAATGGCTTCGTCGGCTG GTCTACCTTTCGCTAGCCACTGGGACCGTCTACGTCCTCGACACTCAATTCTACGCCTCGTCTCTCACACGCACA GCTCGAACCTTCAGCTTGGGCCTCCTGGTAGCCCTGGATTACAAGATAAACTTCCGTCCCAACCCGCCGCTGGCC AGAGACATCAATGCCGTACACACCCGCAATGCTGAGCGTCTGTCCGACCTCCTGCGTCACAATGGCGGTCTGTAC CTGAAAATCGGCCAAGCCATCGCTATGCAGTCCGCCATCCTGCCCCCGGAATTTCAGAAAATGTTCTCGCGCATG TTCGATGACGCCCCTCAGAACGACTGGAAAGATGTCGACAAGGTCATCCGCGAGGACTTTGGCCGCTCGGCTGAG GAGGTTTTTGGCGTCTCCTTCACGGGTGAGCCCGGAAAGGGTGTTATGGAGCGGACTGCGCGCGCGAGTGCCAGT GTAGCACAGGTACATTGGGCGCGTCTTCCGGATGGTCGTGAGGTGGCAATCAAGATCCAGAAACGTGAAATTGCT CAACAGCTGAAATGGGATCTGTGGGCTTTCAAAGTCGTTGCCTGGATCTATAGCCGCACCTTTGATATTCCGTTC TACAGCCTGGTTCCTTATGTGTCGGAGCGTCTCTCCCTTGAGACGGACTTTGAAAATGAGGCCGACAACTCCGAG AACATGGCGCGTTTGGTCGCCGGAGAGCCCCGTCTCCGCGGCCGGGTCTACATTCCCAAGGTCCACCGCGAGCTC AGCTCTAAGCGCGTCATGACCGCCGAGTGGATCGAGGGTGTTCGCCTCTGGGATAAGGACTCCATCACGCGGACC TGGCGTGGTGGCTGGCGTAGCGGCACCCCAGGCTGCCATGGCACGCCTCTCGACGCGCGCAATGCCGAGGATCCT GTCGCCAAAGTGGCCCGCAACCCGAGCCTAACCACCAAGATTAAGCCCGAGCGCGATCACTGGCGCGGCGGGTAC GCTCGCGCTGGTCTAGGCCTATCACTTAAGGAAGTCATGACTACTATGGTGGACCTCTTCTCCGCACAGATGTTC CTCTGGGGTATAGTCCACTGTGACCCGCACCCAGGCAACATCTTTATCCGCCGGACTCCTTCCGGTCACCCAGAG CTTGTCCTTATCGACCACGGACTGTACATTCACATGGACACCGAATTCCGACACCAGTACGCCCGCTTTTGGAAA GCTCTCCTCACCTTCGACAACACCACCCTTAACTCTATCGTCCGCGGCTGGGGCGTCCAGAATGCTGACCTCTTT GCCTCTGCCACCCTAATGCGCCCCTACCGCGGCGGCGATCTCTCGACGCATCGCTCCTTCGAAGGACTCAGCAAA TCCGAGCGTGCCACGCGCCACTACGAAATGCAGCAAGCCGCCCGCAAAGCCATTCGCGACATCCTCGGTGACGAA TCCAAATGGCCCCGCCCACTGATCTTCATTGGCCGCAACCTTCGCATCGTGCAGGCAAACAACCAGTTCCTGGGC TCGCCCGTCAACCGTATTAAGATCACAGGCACTTGGGCGTCCCGCGCGCTAGTTGAGTCTCCGGACTTGTCGGCG TCGGAGAGACTGAGAAACTTCGGTCGCCACCTGTTGTTCCGCGTGGTCCTGTTCAGCACAGACTTGTTCTTCTGG TTTACGAAGGTGCGGCAGTTCTTGAGACTTGGTGGAGGTATGGAGGATAGCATTGAGGCGCAGATGCAGGGGATG GCAAAGGATATGGGAGTGGAGTTGAGTCAGAATGTGTTCGAGGGATAA |
Gene | >Ani_SJS72_1|g3187.t1 ATGGCATCGGCCACCGTTCCCCGCGCCTGGCGCTCCCTCCCCTCCCAGTTTGCCCGCCCGCGCGTCCATCTTTCC CCTCGTGCTCCCCGTCAGCCTCTCTTGCAACTCCGTCAATATGTCCAAGCAGGCCATTACCAGCCTTTCGTTCCC CCATCGCCAGCCTCCCTAGGCAAACCCACCAAGGCCAAGACCTACGATCGCACCCGTAAATGGCTTCGTCGGCTG GTCTACCTTTCGCTAGCCACTGGGACCGTCTACGTCCTCGACACTCAATTCTACGCCTCGTCTCTCACACGCACA GCTCGAACCTTCAGCTTGGGCCTCCTGGTAGCCCTGGATTACAAGATAAACTTCCGTCCCAACCCGCCGCTGGCC AGAGACATCAATGCCGTACACACCCGCAATGCTGAGCGTCTGTCCGACCTCCTGCGTCACAATGGCGGTCTGTAC CTGAAAATCGGCCAAGCCATCGCTATGCAGTCCGCCATCCTGCCCCCGGAATTTCAGAAAATGTTCTCGCGCATG TTCGATGACGCCCCTCAGAACGACTGGAAAGATGTCGACAAGGTCATCCGCGAGGACTTTGGCCGCTCGGCTGAG GAGGTTTTTGGCGTCTCCTTCACGGGTGAGCCCGGAAAGGGTGTTATGGAGCGGACTGCGCGCGCGAGTGCCAGT GTAGCACAGGTACATTGGGCGCGTCTTCCGGATGGTCGTGAGGTGGCAATCAAGATCCAGAAACGTGAAATTGCT CAACAGCTGAAATGGGATCTGTGGGCTTTCAAGTAAGCTCCCGCCCCGCACCCAGCATTGCACACAAAATGCTAA TAAGAACAGAGTCGTTGCCTGGATCTATAGCCGCACCTTTGATATTCCGTTCTACAGCCTGGTTCCTTATGTGTC GGAGCGTCTCTCCCTTGAGACGGACTTTGAAAATGAGGCCGACAACTCCGAGAACATGGCGCGTTTGGTCGCCGG AGAGCCCCGTCTCCGCGGCCGGGTCTACATTCCCAAGGTCCACCGCGAGCTCAGCTCTAAGCGCGTCATGACCGC CGAGTGGATCGAGGGTGTTCGCCTCTGGGATAAGGACTCCATCACGCGGACCTGGCGTGGTGGCTGGCGTAGCGG CACCCCAGGCTGCCATGGCACGCCTCTCGACGCGCGCAATGCCGAGGATCCTGTCGCCAAAGTGGCCCGCAACCC GAGCCTAACCACCAAGATTAAGCCCGAGCGCGATCACTGGCGCGGCGGGTACGCTCGCGCTGGTCTAGGCCTATC ACTTAAGGAAGTCATGACTACTATGGTGGACCTCTTCTCCGCACAGATGTTCCTCTGGGGTATAGTCCACTGTGA CCCGCACCCAGGCAACATCTTTATCCGCCGGACTCCTTCCGGTCACCCAGAGCTTGTCCTTATCGACCACGGACT GTACATTCACATGGACACCGAATTCCGACACCAGTACGCCCGCTTTTGGAAAGCTCTCCTCACCTTCGACAACAC CACCCTTAACTCTATCGTCCGCGGCTGGGGCGTCCAGAATGCTGACCTCTTTGCCTCTGCCACCCTAATGCGCCC CTACCGCGGCGGCGATCTCTCGACGCATCGCTCCTTCGAAGGACTCAGCAAATCCGAGCGTGCCACGCGCCACTA CGAAATGCAGCAAGCCGCCCGCAAAGCCATTCGCGACATCCTCGGTGACGAATCCAAATGGCCCCGCCCACTGAT CTTCATTGGCCGCAACCTTCGCATCGTGCAGGCAAACAACCAGTTCCTGGGCTCGCCCGTCAACCGTATTAAGAT CACAGGCACTTGGGCGTCCCGCGCGCTAGTTGAGTCTCCGGACTTGTCGGCGTCGGAGAGACTGAGAAACTTCGG TCGCCACCTGTTGTTCCGCGTGGTCCTGTTCAGCACAGACTTGTTCTTCTGGTTTACGAAGGTGCGGCAGTTCTT GAGACTTGGTGGAGGTATGGAGGATAGCATTGAGGCGCAGATGCAGGGGATGGCAAAGGATATGGGAGTGGAGTT GAGTCAGAATGTGTTCGAGGGATAA |