Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g3178.t1
Gene name
Location	scaffold_017:242710..243553
Strand	+
Gene length (bp)	843
Transcript length (bp)	771
Coding sequence length (bp)	771
Protein length (aa)	257

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 48	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	50	72	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g3178.t1 MATTTSSTPNQDPTTTLSSTTSTHSSHSTTTQASLATSQGSGTWHPTAALIGGTVAGAVGLLLFIILLVFCVQRA RKRRHQTFRLLRWRSGHNSEPKSPNGTSPRLPPTARTRPRPRSRCTSLLPKYTHHTHTHKYKHSHSHAPSLPPFT FPDSAPSYPYKKNRAAELSDTGFYRPRAELPAQSSRELINIPAERRCRWDCDGGDGASDMIVTADGAVLRATIKT VEADSPFAIYDDDARTTTRKVRHSILGLSMG*
Coding	>Ani_SJS72_1\|g3178.t1 ATGGCCACAACCACATCCTCAACTCCAAATCAAGATCCTACCACAACACTCTCTTCGACAACATCAACACACTCT TCCCACTCCACCACTACCCAAGCCAGCCTCGCAACATCCCAAGGCTCAGGCACATGGCACCCCACCGCAGCCCTA ATAGGGGGAACAGTGGCCGGCGCAGTAGGCCTCCTCCTATTCATCATCCTACTAGTATTCTGCGTCCAGCGTGCT CGAAAGCGAAGACACCAGACATTTAGATTGCTACGATGGCGCAGTGGACATAACAGCGAACCCAAGTCACCAAAC GGAACCTCTCCCCGCCTACCACCAACAGCAAGAACCAGACCCAGACCTAGAAGCAGATGCACCTCCCTCCTACCC AAGTACACTCATCACACTCACACCCACAAGTACAAGCACAGTCACAGCCACGCACCATCCCTCCCCCCCTTCACA TTCCCCGACTCAGCACCCTCCTACCCCTACAAAAAGAACCGAGCCGCTGAGCTCAGCGACACGGGATTCTACCGA CCTCGTGCTGAGCTCCCCGCTCAATCATCTCGGGAATTGATCAATATACCCGCTGAGAGACGATGTCGATGGGAC TGTGATGGTGGGGATGGGGCGTCGGATATGATTGTTACGGCTGATGGGGCGGTCCTGAGGGCGACGATTAAGACG GTGGAGGCGGATAGCCCTTTTGCTATCTATGATGATGATGCTAGGACTACCACTAGGAAGGTCCGCCACAGTATT CTGGGGTTGAGTATGGGATGA
Transcript	>Ani_SJS72_1\|g3178.t1 ATGGCCACAACCACATCCTCAACTCCAAATCAAGATCCTACCACAACACTCTCTTCGACAACATCAACACACTCT TCCCACTCCACCACTACCCAAGCCAGCCTCGCAACATCCCAAGGCTCAGGCACATGGCACCCCACCGCAGCCCTA ATAGGGGGAACAGTGGCCGGCGCAGTAGGCCTCCTCCTATTCATCATCCTACTAGTATTCTGCGTCCAGCGTGCT CGAAAGCGAAGACACCAGACATTTAGATTGCTACGATGGCGCAGTGGACATAACAGCGAACCCAAGTCACCAAAC GGAACCTCTCCCCGCCTACCACCAACAGCAAGAACCAGACCCAGACCTAGAAGCAGATGCACCTCCCTCCTACCC AAGTACACTCATCACACTCACACCCACAAGTACAAGCACAGTCACAGCCACGCACCATCCCTCCCCCCCTTCACA TTCCCCGACTCAGCACCCTCCTACCCCTACAAAAAGAACCGAGCCGCTGAGCTCAGCGACACGGGATTCTACCGA CCTCGTGCTGAGCTCCCCGCTCAATCATCTCGGGAATTGATCAATATACCCGCTGAGAGACGATGTCGATGGGAC TGTGATGGTGGGGATGGGGCGTCGGATATGATTGTTACGGCTGATGGGGCGGTCCTGAGGGCGACGATTAAGACG GTGGAGGCGGATAGCCCTTTTGCTATCTATGATGATGATGCTAGGACTACCACTAGGAAGGTCCGCCACAGTATT CTGGGGTTGAGTATGGGATGA
Gene	>Ani_SJS72_1\|g3178.t1 ATGGCCACAACCACATCCTCAACTCCAAATCAAGATCCTACCACAACACTCTCTTCGACAACATCAACACACTCT TCCCACTCCACCACTACCCAAGCCAGCCTCGCAACATCCCAAGGCTCAGGCACATGGCACCCCACCGCAGCCCTA ATAGGGGGAACAGTGGCCGGCGCAGTAGGCCTCCTCCTATTCATCATCCTACTAGTATTCTGCGTCCAGCGTGCT CGAAAGCGAAGACACCAGACATTTAGATTGCTACGATGGCGCAGTGGACATAACAGCGAACCCAAGTCACCAAAC GGTATACATCCTCAAGCTCCACCCTGACCATCACATTCGCCCATCTCATGATAGCAGACTAACCTATCCCCAGGA ACCTCTCCCCGCCTACCACCAACAGCAAGAACCAGACCCAGACCTAGAAGCAGATGCACCTCCCTCCTACCCAAG TACACTCATCACACTCACACCCACAAGTACAAGCACAGTCACAGCCACGCACCATCCCTCCCCCCCTTCACATTC CCCGACTCAGCACCCTCCTACCCCTACAAAAAGAACCGAGCCGCTGAGCTCAGCGACACGGGATTCTACCGACCT CGTGCTGAGCTCCCCGCTCAATCATCTCGGGAATTGATCAATATACCCGCTGAGAGACGATGTCGATGGGACTGT GATGGTGGGGATGGGGCGTCGGATATGATTGTTACGGCTGATGGGGCGGTCCTGAGGGCGACGATTAAGACGGTG GAGGCGGATAGCCCTTTTGCTATCTATGATGATGATGCTAGGACTACCACTAGGAAGGTCCGCCACAGTATTCTG GGGTTGAGTATGGGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail