© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g308.t1 |
| Gene name | |
| Location | scaffold_001:883466..885257 |
| Strand | + |
| Gene length (bp) | 1791 |
| Transcript length (bp) | 834 |
| Coding sequence length (bp) | 834 |
| Protein length (aa) | 278 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 42 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 21 | 43 | 22 |
| 2 | 58 | 77 | 19 |
| 3 | 116 | 138 | 22 |
| 4 | 163 | 185 | 22 |
| 5 | 190 | 212 | 22 |
| 6 | 227 | 249 | 22 |
| 7 | 254 | 276 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g308.t1 MHSVAGSPGDPKCWSTRLRCAILMNICAYVFIGNLYAAGLATGFAPLAHDLGVEFDTLTGLVAWAVFALGISNLF WMPTAMCIESWLHLYHPRIVLISAISPQFLSAPPYHLSSSAIGIYTLSSFLGIVIGYPIAGPFTDLLSRWAAARR YTTNNTHHPKDRMPALIIPFLVAPPGLILFAYAIASSKSLYVSATGYAMQASALVFVPSVTMSYIMDVYPQSGSE AIVLINAGKNVVAFGVTVSGAGWVDRDGIVRVCWELAAVQWVVLALALPLYV* |
| Coding | >Ani_SJS72_1|g308.t1 ATGCACAGTGTTGCCGGTTCTCCTGGCGACCCAAAGTGTTGGAGTACTCGACTCCGCTGCGCTATCCTGATGAAC ATTTGCGCCTATGTCTTCATTGGGAATCTGTATGCAGCAGGTCTCGCCACTGGCTTTGCTCCACTGGCTCATGAC CTCGGCGTTGAATTCGACACGCTTACTGGCCTTGTCGCCTGGGCTGTATTTGCACTCGGAATCTCGAATCTCTTC TGGATGCCGACCGCAATGTGCATCGAATCGTGGCTTCATTTGTACCATCCCAGAATCGTCCTCATCTCCGCCATC AGCCCCCAATTCCTCTCAGCACCACCATACCACCTATCCTCATCAGCAATCGGCATCTACACACTCTCCTCCTTC CTCGGCATCGTGATAGGATATCCCATCGCAGGTCCCTTCACCGACCTCCTCTCCAGATGGGCTGCCGCCAGAAGA TACACCACCAATAACACCCACCACCCAAAAGACCGCATGCCCGCACTCATCATCCCCTTCCTAGTCGCACCACCA GGCTTAATCCTCTTTGCGTATGCAATCGCAAGCAGTAAATCCTTGTACGTCTCTGCCACCGGTTATGCCATGCAA GCGTCAGCCTTAGTCTTCGTCCCTTCAGTCACCATGTCTTATATCATGGATGTGTATCCGCAGTCGGGAAGCGAG GCCATAGTACTTATTAATGCGGGTAAAAATGTGGTTGCGTTCGGAGTGACGGTCTCTGGTGCTGGTTGGGTGGAT CGTGATGGCATCGTCCGGGTTTGTTGGGAGTTGGCTGCTGTGCAGTGGGTGGTTTTGGCGTTGGCTCTGCCGCTG TATGTCTGA |
| Transcript | >Ani_SJS72_1|g308.t1 ATGCACAGTGTTGCCGGTTCTCCTGGCGACCCAAAGTGTTGGAGTACTCGACTCCGCTGCGCTATCCTGATGAAC ATTTGCGCCTATGTCTTCATTGGGAATCTGTATGCAGCAGGTCTCGCCACTGGCTTTGCTCCACTGGCTCATGAC CTCGGCGTTGAATTCGACACGCTTACTGGCCTTGTCGCCTGGGCTGTATTTGCACTCGGAATCTCGAATCTCTTC TGGATGCCGACCGCAATGTGCATCGAATCGTGGCTTCATTTGTACCATCCCAGAATCGTCCTCATCTCCGCCATC AGCCCCCAATTCCTCTCAGCACCACCATACCACCTATCCTCATCAGCAATCGGCATCTACACACTCTCCTCCTTC CTCGGCATCGTGATAGGATATCCCATCGCAGGTCCCTTCACCGACCTCCTCTCCAGATGGGCTGCCGCCAGAAGA TACACCACCAATAACACCCACCACCCAAAAGACCGCATGCCCGCACTCATCATCCCCTTCCTAGTCGCACCACCA GGCTTAATCCTCTTTGCGTATGCAATCGCAAGCAGTAAATCCTTGTACGTCTCTGCCACCGGTTATGCCATGCAA GCGTCAGCCTTAGTCTTCGTCCCTTCAGTCACCATGTCTTATATCATGGATGTGTATCCGCAGTCGGGAAGCGAG GCCATAGTACTTATTAATGCGGGTAAAAATGTGGTTGCGTTCGGAGTGACGGTCTCTGGTGCTGGTTGGGTGGAT CGTGATGGCATCGTCCGGGTTTGTTGGGAGTTGGCTGCTGTGCAGTGGGTGGTTTTGGCGTTGGCTCTGCCGCTG TATGTCTGA |
| Gene | >Ani_SJS72_1|g308.t1 ATGCACAGTGTTGCCGGTTCTCCTGGCGACCCAAAGGTATCCTCCATTTTCTATGTACAAATTGTCCTCCATCAA AAGTGTTGAGTACTAAGAAGCAATAGTGTTGGAGTACTCGACTCCGCTGCGCTATCCTGATGAACATTTGCGCCT ATGTCTTCATTGGGAATCTGTATGCAGCAGGTCTCGCCACTGGCTTTGCTCCACTGGCTCATGACCTCGGCGTTG AATTCGACACGCTTACTGGCCTTGTCGCCTGGGCTGTATTTGCACTCGGAATCTCGAATCTCTTCTGGATGCCGA CCGCAATGTGCATCGGTAAGCGGCCAGTTATATTGATCTCCATGATAGTCTTCCTGGCTGGATGCACATGGAGCA TCAAAGCAACCGGTTTCAGAGATCTGCTAGCTTCCAGAATCGTGGCTTCATTTGGTGCGTAGTACCTATCGTTAC TGCTATATAACGCGTGAGCTCCCCTTGATTGGTGATCTAGGGGCTGGGTCTATCGAGGCTCTTGGGCCATCCATT ATCGCTGGTAAGTGAGTTCGCCTTGACTAACCTTCAGTCAATTGACATGTTATTTATGTATTCTTGTATCATACA GATCTCTTCTCGGAGAGGTACTTTGCAACCGCCATGGCTCTCTTCGCCTTGTCGCTTTGTGCTGGATCTCAAATC GGTCCCATGATTGCCGGCTTTGTTATCGGTAGCAAGGGCTGGAGATGGTTTTTTATTGTTTGCGCCATCCTCGGT GCAGTCAACTTCTTGGCTTCGGTCCTTTTTTTGCCTGAAACAACCTTTCGACATCGTTTGACCGACGTTGGGGAT GTTCATGCCGCTGAATTCGAAAAGGAAGCGAAACAAAGGACTGAACACAGAGAAAATGAAAATTCACCCAGAAGT TACTGGAAAGACCTGATATCAATTAGAGACCGCGGTCTCGAGCCTGAGGGACTTAAATGCTGGCCTGGGCAATTT TCCCTCCCATTCCGGTTCATTTGTGTCCCTATGGTTTTATTTGCGACAATCGCCTATGGCATCTTTCTTTCTGGG TTAGTGGATTTATACTGCTGCTCTTACTCCCTCCTCTTCCTCCTTTGACTTCCCTGGTGCTGCCATTTGTCCTAC CTATTAACACAAATAATTTGTACAGTAGTAGCAGCAGCTACTACTAGTACTCACCCCTACTGATATCTATATACT ACACTATACAAGCTGACTAGCAAGTACCATCCCAGAATCGTCCTCATCTCCGCCATCAGCCCCCAATTCCTCTCA GCACCACCATACCACCTATCCTCATCAGCAATCGGCATCTACACACTCTCCTCCTTCCTCGGCATCGTGATAGGA TATCCCATCGCAGGTCCCTTCACCGACCTCCTCTCCAGATGGGCTGCCGCCAGAAGATACACCACCAATAACACC CACCACCCAAAAGACCGCATGCCCGCACTCATCATCCCCTTCCTAGTCGCACCACCAGGCTTAATCCTCTTTGCG TATGCAATCGCAAGCAGTAAATCCTTGTACGTCTCTGCCACCGGTTATGCCATGCAAGCGTCAGCCTTAGTCTTC GTCCCTTCAGTCACCATGTCTTATATCATGGATGTGTATCCGCAGTCGGGAAGCGAGGCCATAGTACTTATTAAT GCGGGTAAAAATGTGGTTGCGTTCGGAGTGACGGTCTCTGGTGCTGGTTGGGTGGATCGTGATGGCATCGTCCGG GTTTGTTGGGAGTTGGCTGCTGTGCAGTGGGTGGTTTTGGCGTTGGCTCTGCCGCTGTATGTCTGA |