Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g3044.t1
Gene name
Locationscaffold_016:307265..308691
Strand-
Gene length (bp)1426
Transcript length (bp)1020
Coding sequence length (bp)1020
Protein length (aa) 340

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03151 TPT Triose-phosphate Transporter family 5.9E-28 26 313

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 39 0.5

Transmembrane Domains

Domain # Start End Length
1 25 47 22
2 52 74 22
3 96 118 22
4 148 167 19
5 171 193 22
6 206 228 22
7 243 265 22
8 270 292 22
9 296 313 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g3044.t1
MAAKSQLPTVNTPVSAEPSKAAMHPAFYIATWIALSSGVIIFNKWILHTAGFSFPLFLTTWHLVFATIMTRLMAR
FTTLLDSRHQVPMTSRVYMRAIVPIGAFFSLSLICGNLAYLYLSVSFIQMLKATNSVATLLATWAMGIAPVKLSL
LGNISFIVLGVIIASIGEIKFTMIGFICQFFATIFESVRLVMVQRLLSSAEFKMDPLVSLYYFAPACAVMNAVVT
AVVELPTLHMSDIYQLGMGTLFLNAAVAFGLNVAVVFLIGKTSALVLTLSGVLKDILLVVASMVIFRDPVTPLQA
FGYAIALGGLVYYKLGRDGVNNLLAQVRYQLLGGPRPEN*
Coding >Ani_SJS72_1|g3044.t1
ATGGCTGCCAAATCCCAATTGCCGACCGTCAACACGCCTGTGTCCGCGGAGCCTTCCAAGGCCGCCATGCACCCG
GCTTTCTACATCGCTACCTGGATTGCTCTCAGTTCCGGTGTGATCATTTTCAACAAGTGGATTCTCCATACCGCT
GGATTCAGTTTCCCCCTCTTCCTGACCACATGGCATCTCGTTTTCGCTACCATCATGACCCGCCTCATGGCGCGG
TTCACCACTCTGCTCGACTCTCGTCACCAGGTTCCTATGACCTCTCGTGTCTACATGCGTGCCATCGTCCCCATT
GGCGCATTCTTCTCTCTCAGTCTGATCTGCGGTAACCTCGCATATCTCTACCTCAGTGTGTCCTTCATCCAGATG
CTCAAGGCTACCAACTCTGTGGCTACGCTGCTTGCTACTTGGGCCATGGGCATTGCGCCGGTGAAGCTCAGCTTG
CTCGGAAATATTTCCTTCATCGTCCTCGGTGTTATCATTGCCTCTATTGGTGAAATCAAGTTCACCATGATTGGA
TTCATCTGCCAGTTCTTCGCGACCATCTTCGAGTCCGTCCGTCTGGTTATGGTTCAGCGCCTGCTCAGCTCTGCC
GAATTCAAGATGGATCCGTTGGTTTCCCTGTACTACTTCGCACCTGCTTGCGCCGTCATGAACGCCGTCGTCACT
GCGGTTGTCGAGCTCCCCACACTGCACATGTCTGACATCTACCAACTTGGCATGGGTACTCTGTTCCTCAACGCC
GCCGTGGCTTTCGGACTGAACGTTGCTGTCGTCTTTCTGATTGGCAAAACCTCCGCCCTTGTTCTTACCCTGTCC
GGAGTCCTCAAGGATATCCTCCTCGTCGTTGCCTCGATGGTCATCTTCCGCGATCCCGTTACTCCTCTCCAGGCC
TTCGGATACGCGATCGCCCTTGGCGGTCTGGTCTACTACAAGCTTGGAAGGGACGGTGTCAACAACCTTCTGGCC
CAGGTGCGGTACCAGCTGCTTGGTGGCCCCCGCCCCGAGAACTAG
Transcript >Ani_SJS72_1|g3044.t1
ATGGCTGCCAAATCCCAATTGCCGACCGTCAACACGCCTGTGTCCGCGGAGCCTTCCAAGGCCGCCATGCACCCG
GCTTTCTACATCGCTACCTGGATTGCTCTCAGTTCCGGTGTGATCATTTTCAACAAGTGGATTCTCCATACCGCT
GGATTCAGTTTCCCCCTCTTCCTGACCACATGGCATCTCGTTTTCGCTACCATCATGACCCGCCTCATGGCGCGG
TTCACCACTCTGCTCGACTCTCGTCACCAGGTTCCTATGACCTCTCGTGTCTACATGCGTGCCATCGTCCCCATT
GGCGCATTCTTCTCTCTCAGTCTGATCTGCGGTAACCTCGCATATCTCTACCTCAGTGTGTCCTTCATCCAGATG
CTCAAGGCTACCAACTCTGTGGCTACGCTGCTTGCTACTTGGGCCATGGGCATTGCGCCGGTGAAGCTCAGCTTG
CTCGGAAATATTTCCTTCATCGTCCTCGGTGTTATCATTGCCTCTATTGGTGAAATCAAGTTCACCATGATTGGA
TTCATCTGCCAGTTCTTCGCGACCATCTTCGAGTCCGTCCGTCTGGTTATGGTTCAGCGCCTGCTCAGCTCTGCC
GAATTCAAGATGGATCCGTTGGTTTCCCTGTACTACTTCGCACCTGCTTGCGCCGTCATGAACGCCGTCGTCACT
GCGGTTGTCGAGCTCCCCACACTGCACATGTCTGACATCTACCAACTTGGCATGGGTACTCTGTTCCTCAACGCC
GCCGTGGCTTTCGGACTGAACGTTGCTGTCGTCTTTCTGATTGGCAAAACCTCCGCCCTTGTTCTTACCCTGTCC
GGAGTCCTCAAGGATATCCTCCTCGTCGTTGCCTCGATGGTCATCTTCCGCGATCCCGTTACTCCTCTCCAGGCC
TTCGGATACGCGATCGCCCTTGGCGGTCTGGTCTACTACAAGCTTGGAAGGGACGGTGTCAACAACCTTCTGGCC
CAGGTGCGGTACCAGCTGCTTGGTGGCCCCCGCCCCGAGAACTAG
Gene >Ani_SJS72_1|g3044.t1
ATGGCTGCCAAATCCCAATTGCCGACCGTCAACACGCCTGTGTCCGCGGAGCCTTCCAAGGCCGCCATGCACCCG
GCTTTCTACATCGCGTACGACTCTTATGTCTGTGGTAGCTGCCTGTGGATGTTCATTAATTTCTCCCTAGTACCT
GGATTGCTCTCAGTTCCGGTGTGATCATTTTCAACAAGTGGATTCTCCATACCGCTGGATTCAGTGAGTGAACCC
ATCTTCTGTTCTGCTCCAGCATGCGATTAGTGAACTGACCATTGTTACTTCTCTTCCACAGGTTTCCGTACGTCA
ATTCCAATATTCACGCCGAGAAAGTCCGTCGCAAACGACTAACATGCTGCAGCCCTCTTCCTGACCACATGGCAT
CTCGTTTTCGCTACCATCATGACCCGCCTCATGGCGCGGTTCACCACTCTGCTCGACTCTCGTCACCAGGTTCCT
ATGACCTCTCGTGTCTACATGTCAGTTGGATCGTGCTGGAAACCAACAATCAACGGTCGTGTCTAATCAGTTTTT
GTCCTTGCAGGCGTGCCATCGTCCCCATTGGCGCATTCTTCTCTCTCAGTCTGATCTGCGGTAACCTCGCATATC
TCTACCTCAGTGTGTCCTTCATCCAGATGCTCAAGGTGAATAACTTCGACTCCGTGTGCAAGACTGCCGCTAATT
TGATCAGGCTACCAACTCTGTGGCTACGCTGCTTGCTACTTGGGCCATGGGCATTGCGCCGGTGAAGCTCAGCTT
GCTCGGAAATATTTCCTTCATCGTCCTCGGTGTTATCATTGCCTCTATTGGTGAAATCAAGTTCACCATGATTGG
ATTCATCTGTAGGTTTTTTTCTACTCTTGGTGCCAGGGCGGTTTTTTAACACCTCATTAGGCCAGTTCTTCGCGA
CCATCTTCGAGTCCGTCCGTCTGGTTATGGTTCAGCGCCTGCTCAGCTCTGCCGAATTCAAGATGGATCCGTTGG
TTTCCCTGTACTACTTCGCACCTGCTTGCGCCGTCATGAACGCCGTCGTCACTGCGGTTGTCGAGCTCCCCACAC
TGCACATGTCTGACATCTACCAACTTGGCATGGGTACTCTGTTCCTCAACGCCGCCGTGGCTTTCGGACTGAACG
TTGCTGTCGTCTTTCTGGTACGTCTTCGCGACAGTGGTCTTGTGAGCATCAGTTCGCTAACGCTTTATAGATTGG
CAAAACCTCCGCCCTTGTTCTTACCCTGTCCGGAGTCCTCAAGGATATCCTCCTCGTCGTTGCCTCGATGGTCAT
CTTCCGCGATCCCGTTACTCCTCTCCAGGCCTTCGGATACGCGATCGCCCTTGGCGGTCTGGTCTACTACAAGCT
TGGAAGGGACGGTGTCAACAACCTTCTGGCCCAGGTGCGGTACCAGCTGCTTGGTGGCCCCCGCCCCGAGAACTA
G

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail