© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g3044.t1 |
| Gene name | |
| Location | scaffold_016:307265..308691 |
| Strand | - |
| Gene length (bp) | 1426 |
| Transcript length (bp) | 1020 |
| Coding sequence length (bp) | 1020 |
| Protein length (aa) | 340 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03151 | TPT | Triose-phosphate Transporter family | 5.9E-28 | 26 | 313 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 39 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 25 | 47 | 22 |
| 2 | 52 | 74 | 22 |
| 3 | 96 | 118 | 22 |
| 4 | 148 | 167 | 19 |
| 5 | 171 | 193 | 22 |
| 6 | 206 | 228 | 22 |
| 7 | 243 | 265 | 22 |
| 8 | 270 | 292 | 22 |
| 9 | 296 | 313 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g3044.t1 MAAKSQLPTVNTPVSAEPSKAAMHPAFYIATWIALSSGVIIFNKWILHTAGFSFPLFLTTWHLVFATIMTRLMAR FTTLLDSRHQVPMTSRVYMRAIVPIGAFFSLSLICGNLAYLYLSVSFIQMLKATNSVATLLATWAMGIAPVKLSL LGNISFIVLGVIIASIGEIKFTMIGFICQFFATIFESVRLVMVQRLLSSAEFKMDPLVSLYYFAPACAVMNAVVT AVVELPTLHMSDIYQLGMGTLFLNAAVAFGLNVAVVFLIGKTSALVLTLSGVLKDILLVVASMVIFRDPVTPLQA FGYAIALGGLVYYKLGRDGVNNLLAQVRYQLLGGPRPEN* |
| Coding | >Ani_SJS72_1|g3044.t1 ATGGCTGCCAAATCCCAATTGCCGACCGTCAACACGCCTGTGTCCGCGGAGCCTTCCAAGGCCGCCATGCACCCG GCTTTCTACATCGCTACCTGGATTGCTCTCAGTTCCGGTGTGATCATTTTCAACAAGTGGATTCTCCATACCGCT GGATTCAGTTTCCCCCTCTTCCTGACCACATGGCATCTCGTTTTCGCTACCATCATGACCCGCCTCATGGCGCGG TTCACCACTCTGCTCGACTCTCGTCACCAGGTTCCTATGACCTCTCGTGTCTACATGCGTGCCATCGTCCCCATT GGCGCATTCTTCTCTCTCAGTCTGATCTGCGGTAACCTCGCATATCTCTACCTCAGTGTGTCCTTCATCCAGATG CTCAAGGCTACCAACTCTGTGGCTACGCTGCTTGCTACTTGGGCCATGGGCATTGCGCCGGTGAAGCTCAGCTTG CTCGGAAATATTTCCTTCATCGTCCTCGGTGTTATCATTGCCTCTATTGGTGAAATCAAGTTCACCATGATTGGA TTCATCTGCCAGTTCTTCGCGACCATCTTCGAGTCCGTCCGTCTGGTTATGGTTCAGCGCCTGCTCAGCTCTGCC GAATTCAAGATGGATCCGTTGGTTTCCCTGTACTACTTCGCACCTGCTTGCGCCGTCATGAACGCCGTCGTCACT GCGGTTGTCGAGCTCCCCACACTGCACATGTCTGACATCTACCAACTTGGCATGGGTACTCTGTTCCTCAACGCC GCCGTGGCTTTCGGACTGAACGTTGCTGTCGTCTTTCTGATTGGCAAAACCTCCGCCCTTGTTCTTACCCTGTCC GGAGTCCTCAAGGATATCCTCCTCGTCGTTGCCTCGATGGTCATCTTCCGCGATCCCGTTACTCCTCTCCAGGCC TTCGGATACGCGATCGCCCTTGGCGGTCTGGTCTACTACAAGCTTGGAAGGGACGGTGTCAACAACCTTCTGGCC CAGGTGCGGTACCAGCTGCTTGGTGGCCCCCGCCCCGAGAACTAG |
| Transcript | >Ani_SJS72_1|g3044.t1 ATGGCTGCCAAATCCCAATTGCCGACCGTCAACACGCCTGTGTCCGCGGAGCCTTCCAAGGCCGCCATGCACCCG GCTTTCTACATCGCTACCTGGATTGCTCTCAGTTCCGGTGTGATCATTTTCAACAAGTGGATTCTCCATACCGCT GGATTCAGTTTCCCCCTCTTCCTGACCACATGGCATCTCGTTTTCGCTACCATCATGACCCGCCTCATGGCGCGG TTCACCACTCTGCTCGACTCTCGTCACCAGGTTCCTATGACCTCTCGTGTCTACATGCGTGCCATCGTCCCCATT GGCGCATTCTTCTCTCTCAGTCTGATCTGCGGTAACCTCGCATATCTCTACCTCAGTGTGTCCTTCATCCAGATG CTCAAGGCTACCAACTCTGTGGCTACGCTGCTTGCTACTTGGGCCATGGGCATTGCGCCGGTGAAGCTCAGCTTG CTCGGAAATATTTCCTTCATCGTCCTCGGTGTTATCATTGCCTCTATTGGTGAAATCAAGTTCACCATGATTGGA TTCATCTGCCAGTTCTTCGCGACCATCTTCGAGTCCGTCCGTCTGGTTATGGTTCAGCGCCTGCTCAGCTCTGCC GAATTCAAGATGGATCCGTTGGTTTCCCTGTACTACTTCGCACCTGCTTGCGCCGTCATGAACGCCGTCGTCACT GCGGTTGTCGAGCTCCCCACACTGCACATGTCTGACATCTACCAACTTGGCATGGGTACTCTGTTCCTCAACGCC GCCGTGGCTTTCGGACTGAACGTTGCTGTCGTCTTTCTGATTGGCAAAACCTCCGCCCTTGTTCTTACCCTGTCC GGAGTCCTCAAGGATATCCTCCTCGTCGTTGCCTCGATGGTCATCTTCCGCGATCCCGTTACTCCTCTCCAGGCC TTCGGATACGCGATCGCCCTTGGCGGTCTGGTCTACTACAAGCTTGGAAGGGACGGTGTCAACAACCTTCTGGCC CAGGTGCGGTACCAGCTGCTTGGTGGCCCCCGCCCCGAGAACTAG |
| Gene | >Ani_SJS72_1|g3044.t1 ATGGCTGCCAAATCCCAATTGCCGACCGTCAACACGCCTGTGTCCGCGGAGCCTTCCAAGGCCGCCATGCACCCG GCTTTCTACATCGCGTACGACTCTTATGTCTGTGGTAGCTGCCTGTGGATGTTCATTAATTTCTCCCTAGTACCT GGATTGCTCTCAGTTCCGGTGTGATCATTTTCAACAAGTGGATTCTCCATACCGCTGGATTCAGTGAGTGAACCC ATCTTCTGTTCTGCTCCAGCATGCGATTAGTGAACTGACCATTGTTACTTCTCTTCCACAGGTTTCCGTACGTCA ATTCCAATATTCACGCCGAGAAAGTCCGTCGCAAACGACTAACATGCTGCAGCCCTCTTCCTGACCACATGGCAT CTCGTTTTCGCTACCATCATGACCCGCCTCATGGCGCGGTTCACCACTCTGCTCGACTCTCGTCACCAGGTTCCT ATGACCTCTCGTGTCTACATGTCAGTTGGATCGTGCTGGAAACCAACAATCAACGGTCGTGTCTAATCAGTTTTT GTCCTTGCAGGCGTGCCATCGTCCCCATTGGCGCATTCTTCTCTCTCAGTCTGATCTGCGGTAACCTCGCATATC TCTACCTCAGTGTGTCCTTCATCCAGATGCTCAAGGTGAATAACTTCGACTCCGTGTGCAAGACTGCCGCTAATT TGATCAGGCTACCAACTCTGTGGCTACGCTGCTTGCTACTTGGGCCATGGGCATTGCGCCGGTGAAGCTCAGCTT GCTCGGAAATATTTCCTTCATCGTCCTCGGTGTTATCATTGCCTCTATTGGTGAAATCAAGTTCACCATGATTGG ATTCATCTGTAGGTTTTTTTCTACTCTTGGTGCCAGGGCGGTTTTTTAACACCTCATTAGGCCAGTTCTTCGCGA CCATCTTCGAGTCCGTCCGTCTGGTTATGGTTCAGCGCCTGCTCAGCTCTGCCGAATTCAAGATGGATCCGTTGG TTTCCCTGTACTACTTCGCACCTGCTTGCGCCGTCATGAACGCCGTCGTCACTGCGGTTGTCGAGCTCCCCACAC TGCACATGTCTGACATCTACCAACTTGGCATGGGTACTCTGTTCCTCAACGCCGCCGTGGCTTTCGGACTGAACG TTGCTGTCGTCTTTCTGGTACGTCTTCGCGACAGTGGTCTTGTGAGCATCAGTTCGCTAACGCTTTATAGATTGG CAAAACCTCCGCCCTTGTTCTTACCCTGTCCGGAGTCCTCAAGGATATCCTCCTCGTCGTTGCCTCGATGGTCAT CTTCCGCGATCCCGTTACTCCTCTCCAGGCCTTCGGATACGCGATCGCCCTTGGCGGTCTGGTCTACTACAAGCT TGGAAGGGACGGTGTCAACAACCTTCTGGCCCAGGTGCGGTACCAGCTGCTTGGTGGCCCCCGCCCCGAGAACTA G |