© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g3000.t1 |
| Gene name | |
| Location | scaffold_016:178320..179964 |
| Strand | - |
| Gene length (bp) | 1644 |
| Transcript length (bp) | 1440 |
| Coding sequence length (bp) | 1440 |
| Protein length (aa) | 480 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 7.4E-27 | 50 | 428 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 32 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 41 | 63 | 22 |
| 2 | 78 | 100 | 22 |
| 3 | 107 | 127 | 20 |
| 4 | 137 | 159 | 22 |
| 5 | 166 | 188 | 22 |
| 6 | 198 | 220 | 22 |
| 7 | 271 | 293 | 22 |
| 8 | 303 | 325 | 22 |
| 9 | 349 | 371 | 22 |
| 10 | 381 | 403 | 22 |
| 11 | 410 | 432 | 22 |
| 12 | 442 | 464 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g3000.t1 MRSSSSDISEPKTVALPSSSLPLWDDDPANAQNWGRFKKIYNTAVPSLLCLLISFALAIYSPSHSHVQEAFHTST TKSLVPFAMYVYGLAFGPMIAAPISETYGRRFIYLVMTPIAMFFILGAGFAHNLATLAVCRLLAGMFISAPLAVG AGTIMDVWSGQATGRGVTLLMTTAFLGPAIGSLIGGWIAQYKDWRWSQWTTLFLGAAFWIFSMGAQESYAQPLIR RRAAKLGLPVPPSPIPPGVAGIQMMLTVTLARPVYMIFTEPIVSLCSMYSSLNFSVLFCFLACVPLVYTDVYGFT PSQCGLVFIALALGCLLGSVGLLVADHYTMARHLQLHPGGGIAPPPERVLWAAMIGGPLMPVALFWFAWTSTSHV HWMSSIVAIGLFGCSNIMVFVSTALYLTRVYGAKFGASALAANGLLRYGIGGSFPLFTVAMYHNLGYSWASSLLG FLAAAFAPLPWLFFRLGSRIRAHSAYAAT* |
| Coding | >Ani_SJS72_1|g3000.t1 ATGCGATCCAGCAGCTCGGACATCAGTGAACCCAAGACGGTCGCTCTACCCTCATCATCACTGCCCCTATGGGAT GATGATCCCGCTAATGCTCAGAACTGGGGTCGTTTCAAGAAGATTTACAATACTGCTGTGCCGTCGCTTCTGTGT CTGTTGATATCGTTCGCGCTGGCTATCTACTCTCCCTCCCACAGCCATGTTCAAGAGGCCTTCCACACCTCGACT ACCAAATCTCTGGTGCCCTTCGCCATGTACGTCTATGGCCTGGCATTCGGGCCCATGATTGCAGCGCCCATCAGT GAGACCTACGGTCGTCGCTTCATCTACCTCGTGATGACGCCCATTGCTATGTTCTTCATCCTCGGGGCTGGATTC GCTCACAACCTAGCTACTCTCGCTGTGTGTCGTCTGCTAGCGGGGATGTTCATCTCAGCGCCCTTGGCCGTCGGG GCGGGCACAATCATGGACGTGTGGAGTGGACAAGCTACCGGGCGCGGTGTCACCCTACTCATGACCACTGCCTTC CTGGGCCCGGCCATCGGATCGCTGATTGGGGGTTGGATCGCCCAGTACAAGGACTGGCGCTGGTCGCAGTGGACA ACGCTGTTTCTCGGGGCAGCCTTTTGGATCTTCAGCATGGGGGCCCAGGAGTCCTATGCCCAACCCCTGATCCGT CGCCGTGCTGCCAAACTAGGACTTCCAGTCCCTCCCAGTCCAATTCCACCGGGTGTGGCTGGGATCCAGATGATG CTCACGGTGACTTTAGCACGACCAGTGTACATGATCTTCACCGAGCCAATTGTGAGTTTGTGCTCGATGTATTCC TCCCTTAACTTCTCTGTCTTGTTCTGTTTCCTTGCCTGTGTTCCGCTCGTTTACACCGATGTGTACGGCTTCACC CCGAGCCAATGCGGACTGGTCTTTATTGCGTTGGCCCTGGGTTGTCTGCTTGGAAGTGTCGGGCTGCTGGTGGCG GACCACTATACAATGGCGCGGCATCTCCAGCTTCATCCGGGAGGAGGAATCGCGCCGCCCCCAGAGCGCGTCTTG TGGGCTGCCATGATTGGCGGCCCGTTGATGCCAGTTGCTCTGTTTTGGTTTGCCTGGACCTCGACTAGTCATGTA CACTGGATGAGCAGCATCGTCGCGATCGGTCTTTTTGGCTGCTCCAATATTATGGTATTCGTATCGACTGCTCTC TACCTCACCCGGGTGTATGGGGCCAAGTTCGGAGCTTCTGCGCTGGCCGCTAATGGCTTACTGAGATACGGCATT GGCGGCTCATTTCCTCTTTTTACGGTAGCCATGTACCATAACTTGGGCTATAGCTGGGCATCTAGCTTGTTGGGG TTCTTGGCCGCTGCTTTTGCACCTCTGCCTTGGTTGTTTTTCCGTCTGGGAAGTCGCATACGCGCGCACAGCGCT TACGCTGCGACCTGA |
| Transcript | >Ani_SJS72_1|g3000.t1 ATGCGATCCAGCAGCTCGGACATCAGTGAACCCAAGACGGTCGCTCTACCCTCATCATCACTGCCCCTATGGGAT GATGATCCCGCTAATGCTCAGAACTGGGGTCGTTTCAAGAAGATTTACAATACTGCTGTGCCGTCGCTTCTGTGT CTGTTGATATCGTTCGCGCTGGCTATCTACTCTCCCTCCCACAGCCATGTTCAAGAGGCCTTCCACACCTCGACT ACCAAATCTCTGGTGCCCTTCGCCATGTACGTCTATGGCCTGGCATTCGGGCCCATGATTGCAGCGCCCATCAGT GAGACCTACGGTCGTCGCTTCATCTACCTCGTGATGACGCCCATTGCTATGTTCTTCATCCTCGGGGCTGGATTC GCTCACAACCTAGCTACTCTCGCTGTGTGTCGTCTGCTAGCGGGGATGTTCATCTCAGCGCCCTTGGCCGTCGGG GCGGGCACAATCATGGACGTGTGGAGTGGACAAGCTACCGGGCGCGGTGTCACCCTACTCATGACCACTGCCTTC CTGGGCCCGGCCATCGGATCGCTGATTGGGGGTTGGATCGCCCAGTACAAGGACTGGCGCTGGTCGCAGTGGACA ACGCTGTTTCTCGGGGCAGCCTTTTGGATCTTCAGCATGGGGGCCCAGGAGTCCTATGCCCAACCCCTGATCCGT CGCCGTGCTGCCAAACTAGGACTTCCAGTCCCTCCCAGTCCAATTCCACCGGGTGTGGCTGGGATCCAGATGATG CTCACGGTGACTTTAGCACGACCAGTGTACATGATCTTCACCGAGCCAATTGTGAGTTTGTGCTCGATGTATTCC TCCCTTAACTTCTCTGTCTTGTTCTGTTTCCTTGCCTGTGTTCCGCTCGTTTACACCGATGTGTACGGCTTCACC CCGAGCCAATGCGGACTGGTCTTTATTGCGTTGGCCCTGGGTTGTCTGCTTGGAAGTGTCGGGCTGCTGGTGGCG GACCACTATACAATGGCGCGGCATCTCCAGCTTCATCCGGGAGGAGGAATCGCGCCGCCCCCAGAGCGCGTCTTG TGGGCTGCCATGATTGGCGGCCCGTTGATGCCAGTTGCTCTGTTTTGGTTTGCCTGGACCTCGACTAGTCATGTA CACTGGATGAGCAGCATCGTCGCGATCGGTCTTTTTGGCTGCTCCAATATTATGGTATTCGTATCGACTGCTCTC TACCTCACCCGGGTGTATGGGGCCAAGTTCGGAGCTTCTGCGCTGGCCGCTAATGGCTTACTGAGATACGGCATT GGCGGCTCATTTCCTCTTTTTACGGTAGCCATGTACCATAACTTGGGCTATAGCTGGGCATCTAGCTTGTTGGGG TTCTTGGCCGCTGCTTTTGCACCTCTGCCTTGGTTGTTTTTCCGTCTGGGAAGTCGCATACGCGCGCACAGCGCT TACGCTGCGACCTGA |
| Gene | >Ani_SJS72_1|g3000.t1 ATGCGATCCAGCAGCTCGGACATCAGTGAACCCAAGACGGTCGCTCTACCCTCATCATCACTGCCCCTATGGGAT GATGATCCCGCTAATGCTCAGAACTGGGGTCGTTTCAAGAAGATTTACAATACTGCTGTGCCGTCGCTTCTGTGT CTGTTGATGTGAGTTCACGTACGCGGAGACGAAGACGCCTTCCATAGACTACTGATACTAATCCTAACATTGCAA TGTTGATAGATCGTTCGCGCTGGCTATCTACTCTCCCTCCCACAGCCATGTTCAAGAGGCCTTCCACACCTCGAC TACCAAATCTCTGGTGCCCTTCGCCATGTACGTCTATGGCCTGGCATTCGGGCCCATGATTGCAGCGCCCATCAG TGAGACCTACGGTCGTCGCTTCATCTACCTCGTGATGACGCCCATTGCTATGTTCTTCATCCTCGGGGCTGGATT CGCTCACAACCTAGCTACTCTCGCTGTGTGTCGTCTGCTAGCGGGGATGTTCATCTCAGCGCCCTTGGCCGTCGG GGCGGGCACAATCATGGACGTGTGGAGTGGACAAGCTACCGGGCGCGGTGTCACCCTACTCATGACCACTGCCTT CCTGGGCCCGGCCATCGGATCGCTGATTGGGGGTTGGATCGCCCAGTACAAGGACTGGCGCTGGTCGCAGTGGAC AACGCTGTTTCTCGGGGCAGCCTTTTGGATCTTCAGCATGGGGGCCCAGGAGTCCTATGCCCAACCCCTGATCCG TCGCCGTGCTGCCAAACTAGGACTTCCAGTCCCTCCCAGTCCAATTCCACCGGGTGTGGCTGGGATCCAGATGAT GCTCACGGTGACTTTAGCACGACCAGTGTACATGATCTTCACCGAGCCAATTGTGAGTTTGTGCTCGATGTATTC CTCCCTTAACTTCTCTGTCTTGTTCTGTTTCCTTGCCTGTGTTCCGCTCGTTTACACCGATGTGTACGGCTTCAC CCCGAGCCAATGCGGACTGGTCTTTATTGCGTTGGCCCTGGGTTGTCTGCTTGGAAGTGTCGGGCTGCTGGTGGC GGACCACTATACAATGGCGCGGCATCTCCAGCTTCATCCGGGAGGAGGAATCGCGCCGCCCCCAGAGCGCGTCTT GTGGGCTGCCATGATTGGCGGCCCGTTGATGCCAGTTGCTCTGTTTTGGTTTGCCTGGACCTCGACTAGTCATGT ACACTGGATGAGCAGCATCGTCGCGATCGGTCTTTTTGGCTGCTCCAATATTATGGTATTCGTAAGTTGGCAAAT CCTCGTCTCACTCAACATTGAAACCCGGACGCTGACGCTATTGCCTGTCGCAAGGTATCGACTGCTCTCTACCTC ACCCGGGTGTATGGGGCCAAGTTCGGAGCTTCTGCGCTGGCCGCTAATGGCTTACTGAGATACGGCATTGGCGGC TCATTTCCTCTTTTTACGGTAGCCAGTAGGTCACTCGTACAAATTCACTCCCTAGTCAGTCACTAAAAGAGCCTC GCACCTCTAGTGTACCATAACTTGGGCTATAGCTGGGCATCTAGCTTGTTGGGGTTCTTGGCCGCTGCTTTTGCA CCTCTGCCTTGGTTGTTTTTCCGTCTGGGAAGTCGCATACGCGCGCACAGCGCTTACGCTGCGACCTGA |