© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g2999.t1 |
| Gene name | |
| Location | scaffold_016:176476..178009 |
| Strand | + |
| Gene length (bp) | 1533 |
| Transcript length (bp) | 1533 |
| Coding sequence length (bp) | 1533 |
| Protein length (aa) | 511 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 8.2E-84 | 18 | 474 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.1E-18 | 37 | 415 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| 2 | 67 | 86 | 19 |
| 3 | 120 | 142 | 22 |
| 4 | 157 | 176 | 19 |
| 5 | 183 | 205 | 22 |
| 6 | 306 | 328 | 22 |
| 7 | 341 | 360 | 19 |
| 8 | 370 | 392 | 22 |
| 9 | 413 | 435 | 22 |
| 10 | 440 | 459 | 19 |
| Orthofinder run ID | 3 |
| Orthogroup | 9382 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g2999.t1 MSSSNPPREVPWLIWVVAIFGSVSSAGFGFDQGWWASIMSSTQFTRVFGSYDPAQQAWSLSDRQQSLGTGLGYVG VILGLVCGTPLNEKFGRRNSLWLQSVVVTAGVAIEASCQDSYAQFLVGKAVVYFAGGIASTVIPVYQGECAPQHL RGMMTSLYNAFLMVGGFCAALIVYLCRHVPSDWAWRSVVVAQAAIPAMGWLSLPFLPESPYWLLRRGRRAAAITS LRRLHALDAAAAEAEIISIEQQLALQQQQQQQEKELASWMACFTDPIHFRRTLIAVGAQIFQQAQGISFAANYQA VFLEQIGFRQVLLMSVIVYIIGIVGNLTGMFMADRLGRRNVLLPASGILGSCMLTISGLTTPSTSSSSLSIAVVV MLMLWFFTFQSTWGPLAWAITAEIPPTGTAVREKMVTLAGFSAYGTGLIIVFVNPYTQAAIGGKVAFIYGALSVV AAVFVWLFVPETKRRSLEEIDEMFVARVPPREFGIYQCQSGAFDAEKTVDGKTSVDEECV* |
| Coding | >Ani_SJS72_1|g2999.t1 ATGTCATCTTCCAACCCTCCACGGGAGGTCCCCTGGCTCATCTGGGTCGTGGCTATCTTTGGCTCCGTCTCATCC GCGGGCTTTGGCTTTGATCAGGGCTGGTGGGCAAGTATTATGAGTTCGACGCAATTTACCCGTGTCTTTGGCTCC TACGACCCAGCCCAGCAGGCCTGGTCCCTCAGCGATCGACAGCAGTCCCTCGGCACGGGTCTGGGCTATGTAGGG GTCATCCTCGGGTTGGTGTGCGGCACACCACTGAACGAAAAATTTGGACGACGGAACAGTCTCTGGCTGCAGTCG GTGGTGGTGACTGCTGGGGTCGCCATTGAAGCATCCTGCCAGGACAGCTACGCGCAATTCCTGGTGGGCAAGGCA GTCGTCTACTTCGCCGGTGGCATCGCCTCAACGGTCATTCCGGTCTACCAAGGAGAGTGCGCACCTCAGCACCTC CGAGGAATGATGACGAGTCTATACAATGCCTTCCTGATGGTAGGCGGCTTTTGTGCCGCCCTCATCGTCTACCTC TGTCGCCATGTACCGAGCGACTGGGCCTGGCGTAGTGTCGTGGTGGCGCAAGCAGCTATTCCCGCCATGGGGTGG CTGAGCCTACCCTTCCTTCCTGAATCCCCATACTGGCTACTTCGCCGTGGCCGTCGTGCTGCCGCCATCACCAGC CTGCGCCGGCTGCATGCCCTGGATGCCGCTGCCGCTGAGGCCGAAATCATTTCCATTGAACAACAACTCGCACTG CAGCAACAGCAACAACAACAAGAGAAGGAGCTCGCATCCTGGATGGCCTGCTTCACAGACCCCATCCACTTCCGT CGGACTCTCATCGCTGTGGGCGCGCAGATCTTCCAGCAGGCCCAGGGAATCTCCTTCGCGGCCAACTATCAGGCC GTTTTTCTGGAACAGATCGGATTCCGCCAGGTCCTCTTGATGTCGGTGATTGTCTATATCATCGGCATAGTCGGC AATCTGACGGGGATGTTCATGGCTGACCGCCTGGGTCGTCGTAACGTGCTCCTCCCGGCATCCGGCATCCTCGGA TCTTGTATGCTGACCATTAGCGGCCTCACCACCCCCTCCACATCCTCATCTTCCCTCTCCATCGCGGTGGTGGTC ATGCTCATGCTTTGGTTCTTTACCTTCCAGAGCACATGGGGTCCGTTGGCCTGGGCAATCACCGCCGAAATCCCA CCCACAGGAACCGCCGTCCGCGAGAAGATGGTTACGCTGGCGGGGTTTTCGGCGTACGGCACCGGATTGATCATC GTCTTTGTGAATCCCTACACTCAGGCCGCTATTGGGGGTAAGGTAGCCTTCATCTACGGCGCACTGTCCGTCGTT GCGGCGGTATTTGTGTGGCTGTTTGTACCGGAGACCAAACGGCGTTCGTTGGAGGAGATTGACGAGATGTTCGTC GCCCGAGTGCCGCCGCGTGAATTCGGCATCTATCAGTGCCAGAGCGGTGCATTCGATGCAGAGAAAACCGTGGAT GGCAAAACGTCAGTGGATGAAGAATGTGTCTGA |
| Transcript | >Ani_SJS72_1|g2999.t1 ATGTCATCTTCCAACCCTCCACGGGAGGTCCCCTGGCTCATCTGGGTCGTGGCTATCTTTGGCTCCGTCTCATCC GCGGGCTTTGGCTTTGATCAGGGCTGGTGGGCAAGTATTATGAGTTCGACGCAATTTACCCGTGTCTTTGGCTCC TACGACCCAGCCCAGCAGGCCTGGTCCCTCAGCGATCGACAGCAGTCCCTCGGCACGGGTCTGGGCTATGTAGGG GTCATCCTCGGGTTGGTGTGCGGCACACCACTGAACGAAAAATTTGGACGACGGAACAGTCTCTGGCTGCAGTCG GTGGTGGTGACTGCTGGGGTCGCCATTGAAGCATCCTGCCAGGACAGCTACGCGCAATTCCTGGTGGGCAAGGCA GTCGTCTACTTCGCCGGTGGCATCGCCTCAACGGTCATTCCGGTCTACCAAGGAGAGTGCGCACCTCAGCACCTC CGAGGAATGATGACGAGTCTATACAATGCCTTCCTGATGGTAGGCGGCTTTTGTGCCGCCCTCATCGTCTACCTC TGTCGCCATGTACCGAGCGACTGGGCCTGGCGTAGTGTCGTGGTGGCGCAAGCAGCTATTCCCGCCATGGGGTGG CTGAGCCTACCCTTCCTTCCTGAATCCCCATACTGGCTACTTCGCCGTGGCCGTCGTGCTGCCGCCATCACCAGC CTGCGCCGGCTGCATGCCCTGGATGCCGCTGCCGCTGAGGCCGAAATCATTTCCATTGAACAACAACTCGCACTG CAGCAACAGCAACAACAACAAGAGAAGGAGCTCGCATCCTGGATGGCCTGCTTCACAGACCCCATCCACTTCCGT CGGACTCTCATCGCTGTGGGCGCGCAGATCTTCCAGCAGGCCCAGGGAATCTCCTTCGCGGCCAACTATCAGGCC GTTTTTCTGGAACAGATCGGATTCCGCCAGGTCCTCTTGATGTCGGTGATTGTCTATATCATCGGCATAGTCGGC AATCTGACGGGGATGTTCATGGCTGACCGCCTGGGTCGTCGTAACGTGCTCCTCCCGGCATCCGGCATCCTCGGA TCTTGTATGCTGACCATTAGCGGCCTCACCACCCCCTCCACATCCTCATCTTCCCTCTCCATCGCGGTGGTGGTC ATGCTCATGCTTTGGTTCTTTACCTTCCAGAGCACATGGGGTCCGTTGGCCTGGGCAATCACCGCCGAAATCCCA CCCACAGGAACCGCCGTCCGCGAGAAGATGGTTACGCTGGCGGGGTTTTCGGCGTACGGCACCGGATTGATCATC GTCTTTGTGAATCCCTACACTCAGGCCGCTATTGGGGGTAAGGTAGCCTTCATCTACGGCGCACTGTCCGTCGTT GCGGCGGTATTTGTGTGGCTGTTTGTACCGGAGACCAAACGGCGTTCGTTGGAGGAGATTGACGAGATGTTCGTC GCCCGAGTGCCGCCGCGTGAATTCGGCATCTATCAGTGCCAGAGCGGTGCATTCGATGCAGAGAAAACCGTGGAT GGCAAAACGTCAGTGGATGAAGAATGTGTCTGA |
| Gene | >Ani_SJS72_1|g2999.t1 ATGTCATCTTCCAACCCTCCACGGGAGGTCCCCTGGCTCATCTGGGTCGTGGCTATCTTTGGCTCCGTCTCATCC GCGGGCTTTGGCTTTGATCAGGGCTGGTGGGCAAGTATTATGAGTTCGACGCAATTTACCCGTGTCTTTGGCTCC TACGACCCAGCCCAGCAGGCCTGGTCCCTCAGCGATCGACAGCAGTCCCTCGGCACGGGTCTGGGCTATGTAGGG GTCATCCTCGGGTTGGTGTGCGGCACACCACTGAACGAAAAATTTGGACGACGGAACAGTCTCTGGCTGCAGTCG GTGGTGGTGACTGCTGGGGTCGCCATTGAAGCATCCTGCCAGGACAGCTACGCGCAATTCCTGGTGGGCAAGGCA GTCGTCTACTTCGCCGGTGGCATCGCCTCAACGGTCATTCCGGTCTACCAAGGAGAGTGCGCACCTCAGCACCTC CGAGGAATGATGACGAGTCTATACAATGCCTTCCTGATGGTAGGCGGCTTTTGTGCCGCCCTCATCGTCTACCTC TGTCGCCATGTACCGAGCGACTGGGCCTGGCGTAGTGTCGTGGTGGCGCAAGCAGCTATTCCCGCCATGGGGTGG CTGAGCCTACCCTTCCTTCCTGAATCCCCATACTGGCTACTTCGCCGTGGCCGTCGTGCTGCCGCCATCACCAGC CTGCGCCGGCTGCATGCCCTGGATGCCGCTGCCGCTGAGGCCGAAATCATTTCCATTGAACAACAACTCGCACTG CAGCAACAGCAACAACAACAAGAGAAGGAGCTCGCATCCTGGATGGCCTGCTTCACAGACCCCATCCACTTCCGT CGGACTCTCATCGCTGTGGGCGCGCAGATCTTCCAGCAGGCCCAGGGAATCTCCTTCGCGGCCAACTATCAGGCC GTTTTTCTGGAACAGATCGGATTCCGCCAGGTCCTCTTGATGTCGGTGATTGTCTATATCATCGGCATAGTCGGC AATCTGACGGGGATGTTCATGGCTGACCGCCTGGGTCGTCGTAACGTGCTCCTCCCGGCATCCGGCATCCTCGGA TCTTGTATGCTGACCATTAGCGGCCTCACCACCCCCTCCACATCCTCATCTTCCCTCTCCATCGCGGTGGTGGTC ATGCTCATGCTTTGGTTCTTTACCTTCCAGAGCACATGGGGTCCGTTGGCCTGGGCAATCACCGCCGAAATCCCA CCCACAGGAACCGCCGTCCGCGAGAAGATGGTTACGCTGGCGGGGTTTTCGGCGTACGGCACCGGATTGATCATC GTCTTTGTGAATCCCTACACTCAGGCCGCTATTGGGGGTAAGGTAGCCTTCATCTACGGCGCACTGTCCGTCGTT GCGGCGGTATTTGTGTGGCTGTTTGTACCGGAGACCAAACGGCGTTCGTTGGAGGAGATTGACGAGATGTTCGTC GCCCGAGTGCCGCCGCGTGAATTCGGCATCTATCAGTGCCAGAGCGGTGCATTCGATGCAGAGAAAACCGTGGAT GGCAAAACGTCAGTGGATGAAGAATGTGTCTGA |